Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 2.3e-174 615.5 322 100.0
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 3.7e-132 475.3 322 76.4
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 4.8e-132 474.9 322 75.8
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 2.0e-130 469.5 323 75.2
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 2.0e-130 469.5 321 75.7
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 2.0e-130 469.5 322 75.8
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 4.5e-130 468.4 325 75.1
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 8.4e-129 464.2 322 73.6
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 4.2e-128 461.8 322 74.5
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 1.6e-127 459.9 323 73.1
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.7e-127 459.1 323 73.7
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 1.8e-126 456.4 324 72.2
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 4.3e-125 451.8 323 71.2
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 8.2e-124 447.6 323 72.8
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 8.2e-124 447.6 325 71.7
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 3.1e-123 445.7 324 72.5
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 2.0e-122 443.0 325 70.5
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 1.3e-121 440.3 288 79.9
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 2.9e-121 439.1 323 72.1
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 3.8e-121 438.7 323 72.1
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.8e-121 438.7 325 70.2
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 2.5e-120 436.0 323 71.2
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 4.2e-120 435.3 323 71.5
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 1.2e-119 433.7 323 70.6
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 2.1e-119 433.0 323 71.2
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 2.1e-119 433.0 329 69.3
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 2.7e-119 432.6 324 68.5
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 4.6e-119 431.8 323 70.3
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 6.1e-119 431.4 292 75.0
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 6.1e-119 431.4 323 69.3
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 7.9e-119 431.0 295 74.6
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 1.3e-118 430.3 323 69.7
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 1.3e-118 430.3 297 73.7
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 1.3e-118 430.3 327 72.8
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 1.3e-118 430.3 322 70.8
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 2.3e-118 429.5 322 70.2
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 3.0e-118 429.1 281 76.2
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 3.0e-118 429.1 329 67.8
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 6.7e-118 427.9 323 68.4
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 8.7e-118 427.6 322 71.1
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 1.1e-117 427.2 315 70.2
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.5e-117 426.8 326 69.0
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 4.3e-117 425.2 326 69.0
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 5.7e-117 424.9 315 69.8
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 5.7e-117 424.9 286 75.9
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 9.7e-117 424.1 344 66.0
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 9.7e-117 424.1 323 67.5
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 1.3e-116 423.7 323 69.0
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 1.6e-116 423.3 254 82.7
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 3.7e-116 422.2 309 69.9
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 6.3e-116 421.4 324 67.0
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 8.2e-116 421.0 254 82.3
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 8.2e-116 421.0 318 69.8
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 8.2e-116 421.0 322 67.7
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 1.4e-115 420.2 325 68.6
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.8e-115 419.9 323 67.2
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 2.4e-115 419.5 295 72.2
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 2.4e-115 419.5 297 72.4
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 2.4e-115 419.5 322 67.4
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 4.1e-115 418.7 324 67.9
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 6.9e-115 417.9 304 71.1
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 6.9e-115 417.9 362 64.4
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 1.2e-114 417.2 326 68.1
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 5.9e-114 414.8 333 67.3
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 7.7e-114 414.5 324 67.3
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 2.2e-113 412.9 295 71.2
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 4.2e-112 408.7 333 64.9
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 3.6e-111 405.6 326 67.2
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 3.6e-111 405.6 322 65.8
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 3.6e-111 405.6 325 64.9
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 3.0e-110 402.5 344 63.1
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 3.9e-110 402.1 302 69.9
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 2.0e-109 399.8 323 65.0
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 2.2e-108 396.4 301 68.1
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 6.3e-108 394.8 284 69.4
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 1.1e-107 394.0 322 65.5
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 6.9e-107 391.3 237 83.1
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 9.1e-107 391.0 304 67.4
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 9.1e-107 391.0 327 65.4
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 3.2e-104 382.5 270 71.1
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 9.4e-104 380.9 271 70.8
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 2.1e-103 379.8 287 69.7
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 1.4e-102 377.1 324 61.1
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 3.0e-102 375.9 287 67.2
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 4.4e-101 372.1 234 79.5
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 1.3e-100 370.5 268 71.3
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.7e-100 369.0 236 75.8
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 2.0e-98 363.2 303 62.7
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 3.5e-98 362.5 282 65.6
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 6.5e-97 358.2 212 84.9
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.1e-96 357.5 237 75.5
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 1.0e-94 350.9 277 68.2
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 5.2e-94 348.6 281 65.5
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 8.8e-94 347.8 301 62.5
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 2.7e-90 336.3 220 75.5
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.5e-90 335.9 212 76.9
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 1.0e-89 334.3 263 65.8
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 2.7e-87 326.2 397 49.1
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 8.5e-81 304.7 281 56.2
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.5e-77 293.9 219 69.9
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 4.9e-76 288.9 281 52.7
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 7.3e-72 275.0 277 52.7
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 7.5e-69 265.0 241 55.6
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 2.7e-66 256.5 249 57.4
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 5.2e-62 242.3 147 81.0
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 6.4e-60 235.3 276 47.1
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 8.9e-54 214.9 277 45.5
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 4.6e-50 202.6 129 78.3
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 1.0e-41 174.9 105 81.9
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 9.3e-35 151.8 88 87.5
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 7.8e-34 148.7 88 86.4
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 3.1e-30 136.7 81 85.2
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 9.0e-22 108.6 76 69.7
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.4e-19 100.5 65 73.8
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 9.3e-19 98.6 64 75.0
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 1.0e-17 95.1 260 30.8
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 7.9e-10 68.9 36 91.7
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 3.0e-09 67.0 35 88.6
MD11G1248800 Malus domestica HOM05D002373 ORTHO05D008661 1.5e-08 64.7 157 38.9


User provided reference genes

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