Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 3.6e-252 874.4 424 100.0
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 6.8e-219 763.8 425 83.5
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 2.2e-217 758.8 425 84.5
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 1.3e-214 749.6 425 82.6
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 1.7e-214 749.2 425 82.4
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 6.6e-214 747.3 424 81.8
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 3.3e-213 745.0 424 82.3
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 4.3e-213 744.6 424 81.1
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 3.6e-212 741.5 424 80.2
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 1.0e-211 740.0 424 81.8
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 1.4e-211 739.6 423 82.0
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 1.4e-211 739.6 424 80.0
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 3.0e-211 738.4 424 80.9
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 6.8e-211 737.3 410 82.2
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 4.4e-210 734.6 423 79.4
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 7.5e-210 733.8 427 78.9
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 7.5e-210 733.8 423 81.6
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 2.2e-209 732.3 413 82.3
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 3.7e-209 731.5 412 82.0
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 2.4e-208 728.8 424 79.7
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 2.7e-207 725.3 412 80.6
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 7.8e-207 723.8 411 80.8
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 1.3e-206 723.0 426 77.0
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 1.7e-206 722.6 421 78.4
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 6.6e-206 720.7 415 81.7
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 1.9e-205 719.2 412 80.3
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 2.5e-205 718.8 425 76.5
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 4.3e-205 718.0 424 76.4
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 4.3e-205 718.0 424 76.2
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 5.6e-205 717.6 412 78.4
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 2.1e-204 715.7 424 77.6
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 6.2e-204 714.1 425 76.9
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 1.1e-203 713.4 419 77.8
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 1.8e-203 712.6 419 78.3
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 8.9e-203 710.3 424 77.6
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 4.4e-202 708.0 424 76.9
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 2.9e-201 705.3 450 73.8
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 4.9e-201 704.5 424 75.9
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 6.4e-201 704.1 425 79.1
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 1.1e-200 703.4 424 75.7
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 3.2e-200 701.8 419 76.6
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 7.0e-200 700.7 424 75.7
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 2.7e-199 698.7 419 76.6
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 6.0e-199 697.6 424 75.5
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 3.9e-198 694.9 424 75.5
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 3.9e-198 694.9 424 75.7
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 8.6e-198 693.7 424 75.2
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 1.1e-197 693.3 405 77.8
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 1.1e-197 693.3 425 77.9
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 1.5e-197 693.0 424 75.0
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 3.3e-197 691.8 412 77.7
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 4.3e-197 691.4 424 74.5
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 5.6e-197 691.0 424 75.2
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 5.6e-197 691.0 421 74.8
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 1.2e-196 689.9 424 74.8
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 1.2e-196 689.9 412 76.2
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 1.6e-196 689.5 424 75.2
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 2.1e-196 689.1 424 74.1
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 2.1e-196 689.1 424 73.8
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 2.8e-196 688.7 422 76.3
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 4.7e-196 688.0 425 74.1
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 8.1e-196 687.2 424 74.1
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.1e-195 686.8 423 75.7
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 1.1e-195 686.8 419 75.9
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 5.2e-195 684.5 404 79.0
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 7.5e-194 680.6 425 73.4
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 9.9e-194 680.2 412 76.5
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.7e-193 679.5 393 78.4
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 3.2e-192 675.2 424 73.1
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 7.8e-191 670.6 418 74.4
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 3.0e-190 668.7 402 76.4
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 1.5e-189 666.4 424 74.1
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 6.2e-188 661.0 540 61.3
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.8e-187 659.4 419 73.5
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 5.2e-187 657.9 424 70.8
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 3.4e-186 655.2 425 72.0
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 8.4e-185 650.6 425 71.5
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 1.9e-184 649.4 409 73.3
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 2.3e-182 642.5 412 73.5
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 3.3e-181 638.6 435 69.7
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 6.2e-180 634.4 458 70.1
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 1.3e-177 626.7 469 65.0
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 3.8e-177 625.2 413 72.6
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 4.2e-176 621.7 413 70.5
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 2.8e-172 609.0 422 66.1
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.5e-165 586.6 415 68.7
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 7.6e-162 574.3 386 69.4
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 1.3e-158 563.5 371 72.0
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 3.0e-158 562.4 414 65.2
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 1.6e-156 556.6 313 81.5
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 1.4e-152 543.5 363 70.0
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 1.9e-152 543.1 387 69.5
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 1.5e-149 533.5 313 77.6
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 8.8e-142 507.7 424 61.3
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 2.6e-101 373.2 214 79.9
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 1.3e-97 360.9 346 46.5
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 4.3e-96 355.9 205 81.0
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 1.7e-92 344.0 204 76.5
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 8.0e-87 325.1 368 42.7
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 8.9e-86 321.6 346 44.8
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 1.6e-74 284.3 366 36.6
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 1.5e-64 251.1 280 43.6
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 1.4e-46 191.4 106 80.2
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 1.9e-40 171.0 103 72.8
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 1.8e-38 164.5 114 66.7
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 1.8e-38 164.5 114 66.7
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 6.9e-38 162.5 103 69.9
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 1.5e-37 161.4 85 83.5
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 2.5e-32 144.1 139 56.8
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.2e-13 82.0 49 73.5
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 5.9e-13 79.7 50 70.0
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 7.7e-13 79.3 49 71.4
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 4.7e-10 70.1 45 68.9
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 6.1e-10 69.7 48 64.6
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 3.0e-09 67.4 63 54.0
QL06p017442 Quercus lobata HOM05D006845 ORTHO05D014305 4.1e-06 57.0 37 67.6


User provided reference genes

Program Settings