Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 2.2e-210 735.3 368 100.0
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 3.7e-128 462.2 371 65.0
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 3.1e-127 459.1 379 65.4
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 5.5e-124 448.4 380 61.1
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 2.3e-122 443.0 385 62.9
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 3.0e-122 442.6 385 62.9
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 8.7e-122 441.0 333 67.9
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 1.5e-121 440.3 373 61.7
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 1.5e-121 440.3 384 62.2
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 1.9e-121 439.9 373 63.3
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 3.3e-121 439.1 384 62.5
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 2.2e-120 436.4 382 62.3
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 3.7e-120 435.6 350 66.0
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 2.4e-119 433.0 298 74.8
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 1.0e-117 427.6 373 59.5
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 1.9e-116 423.3 386 61.4
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 3.2e-116 422.5 373 59.5
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 7.2e-116 421.4 331 64.7
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 1.2e-115 420.6 380 58.7
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 2.7e-115 419.5 383 60.1
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 1.0e-114 417.5 352 64.2
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 3.3e-113 412.5 339 65.8
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 3.3e-113 412.5 377 59.9
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 4.3e-113 412.1 366 60.1
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 2.2e-112 409.8 379 59.4
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 2.2e-112 409.8 364 60.7
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 1.1e-111 407.5 328 62.2
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 1.4e-111 407.1 385 56.4
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 4.1e-111 405.6 357 62.2
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 1.2e-110 404.1 314 66.6
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 1.2e-110 404.1 345 62.3
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 1.2e-110 404.1 375 58.4
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 2.0e-110 403.3 417 55.2
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 7.7e-110 401.4 383 58.2
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 1.3e-109 400.6 340 63.2
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 1.7e-109 400.2 375 58.7
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 1.7e-109 400.2 296 67.2
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 2.2e-109 399.8 383 58.5
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 3.8e-109 399.1 384 56.5
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 4.2e-108 395.6 321 62.9
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 5.5e-108 395.2 383 55.4
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 1.2e-107 394.0 387 57.4
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 6.1e-107 391.7 362 57.5
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 3.0e-106 389.4 310 65.8
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 3.9e-106 389.0 329 60.5
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 5.1e-106 388.7 380 55.3
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 6.7e-106 388.3 321 61.4
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 6.7e-106 388.3 322 62.4
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 8.8e-106 387.9 377 55.7
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 8.8e-106 387.9 368 58.4
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 2.6e-105 386.3 330 60.6
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 3.3e-105 386.0 328 60.4
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 1.3e-104 384.0 365 60.0
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 1.3e-104 384.0 374 58.8
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 1.7e-104 383.6 325 58.5
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 4.8e-104 382.1 380 56.3
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 1.4e-103 380.6 378 57.1
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 2.4e-103 379.8 346 58.1
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 7.0e-103 378.3 318 59.1
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 7.0e-103 378.3 318 59.1
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 1.2e-102 377.5 382 55.0
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 1.5e-102 377.1 380 55.5
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.5e-102 377.1 339 58.7
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.5e-102 377.1 315 61.6
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 1.5e-102 377.1 334 57.5
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 2.0e-102 376.7 381 54.9
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 1.3e-101 374.0 335 58.5
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 2.9e-101 372.9 377 53.8
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 5.0e-101 372.1 353 54.1
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 6.5e-101 371.7 371 54.2
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 6.5e-101 371.7 373 55.0
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 8.5e-101 371.3 361 53.5
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 7.2e-100 368.2 341 56.3
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 1.2e-99 367.5 366 53.6
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 2.1e-99 366.7 325 57.2
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 2.7e-99 366.3 335 56.7
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 3.6e-99 365.9 350 57.7
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 8.0e-99 364.8 404 52.5
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 3.9e-98 362.5 385 52.5
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 4.4e-97 359.0 339 58.4
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 7.4e-97 358.2 292 64.0
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 1.3e-96 357.5 348 54.6
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 1.7e-96 357.1 278 63.7
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 2.2e-96 356.7 350 54.3
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 2.4e-95 353.2 379 53.0
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 1.6e-94 350.5 356 54.5
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 5.9e-94 348.6 292 61.3
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 1.3e-93 347.4 323 55.4
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 7.2e-92 341.7 322 54.0
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 3.0e-90 336.3 290 58.6
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 4.0e-90 335.9 235 71.5
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 6.7e-90 335.1 236 69.1
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 3.3e-89 332.8 386 50.8
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 1.4e-87 327.4 332 55.1
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 7.7e-86 321.6 355 50.7
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 7.2e-76 288.5 326 48.2
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 2.8e-75 286.6 350 46.3
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 2.2e-72 276.9 220 62.3
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 4.9e-72 275.8 224 61.6
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 2.2e-64 250.4 352 40.6
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 2.3e-61 240.4 186 69.4
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 7.3e-60 235.3 238 54.2
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 9.8e-57 224.9 252 49.6
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 3.0e-53 213.4 170 64.7
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 6.2e-51 205.7 184 54.9
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 3.4e-49 199.9 191 52.9
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 1.2e-43 181.4 320 37.2
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 2.4e-42 177.2 303 37.6
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 1.7e-40 171.0 230 37.8
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 3.8e-40 169.9 261 36.4
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 1.9e-39 167.5 189 48.1
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 1.9e-39 167.5 182 53.8
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 9.2e-39 165.2 293 34.5
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 9.2e-39 165.2 147 60.5
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 1.7e-37 161.0 241 37.3
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 2.3e-37 160.6 267 35.2
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 6.6e-37 159.1 255 36.9
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 7.6e-33 145.6 306 30.1
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 8.4e-32 142.1 248 33.9
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 4.2e-31 139.8 263 33.5
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 1.0e-29 135.2 151 45.0
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 7.3e-28 129.0 136 47.1
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 1.3e-27 128.3 188 42.6
Duzib213G0106 Durio zibethinus HOM05D006259 ORTHO05D007804 5.3e-26 122.9 105 58.1
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 6.9e-18 95.9 220 28.2
Atru.chr2.2423 Acer truncatum HOM05D006259 ORTHO05D007804 1.3e-13 81.6 122 41.8
Actinidia09700 Actinidia chinensis HOM05D006259 ORTHO05D053169 5.8e-09 66.2 70 54.3
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 1.3e-08 65.1 52 51.9
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 3.8e-08 63.5 48 54.2


User provided reference genes

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