Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014290001 Vitis vinifera HOM05D006014 ORTHO05D007608 7.3e-93 344.0 184 100.0
Manes.15G089600 Manihot esculenta HOM05D006014 ORTHO05D007608 1.9e-64 249.6 185 76.8
ClCG11G017820 Citrullus lanatus HOM05D006014 ORTHO05D007608 1.5e-61 240.0 188 73.9
Ciclev10009636m.g Citrus clementina HOM05D006014 ORTHO05D007608 5.6e-61 238.0 183 72.1
Nitab4.5_0003033g0060 Nicotiana tabacum HOM05D006014 ORTHO05D007608 2.4e-59 232.6 179 72.1
Hma1.2p1_1411F.1_g281760 Hydrangea macrophylla HOM05D006014 ORTHO05D007608 3.1e-59 232.3 180 72.2
CSS0037767 Camellia sinensis var. sinensis HOM05D006014 ORTHO05D007608 6.9e-59 231.1 180 71.7
TAR626G1430 Trochodendron aralioides HOM05D006014 ORTHO05D007608 1.5e-58 229.9 177 73.4
Dinv14938 Davidia involucrata HOM05D006014 ORTHO05D007608 4.4e-58 228.4 182 70.3
Potri.001G396600 Populus trichocarpa HOM05D006014 ORTHO05D007608 4.4e-58 228.4 174 71.3
Sed0004006 Sechium edule HOM05D006014 ORTHO05D007608 4.4e-58 228.4 184 70.7
CANSAT35G1465 Cannabis sativa HOM05D006014 ORTHO05D007608 5.8e-58 228.0 175 74.3
QL08p024005 Quercus lobata HOM05D006014 ORTHO05D007608 5.8e-58 228.0 173 74.0
MD03G1232600 Malus domestica HOM05D006014 ORTHO05D007608 9.9e-58 227.3 171 72.5
Sabra16G0259700 Salix brachista HOM05D006014 ORTHO05D007608 9.9e-58 227.3 170 71.8
Thecc.07G096300 Theobroma cacao HOM05D006014 ORTHO05D007608 1.3e-57 226.9 176 72.7
FAN21G0470 Fragaria x ananassa HOM05D006014 ORTHO05D007608 2.9e-57 225.7 174 73.0
COL.COLO4_03477 Corchorus olitorius HOM05D006014 ORTHO05D007608 3.8e-57 225.3 176 72.2
RcHm_v2.0_Chr5g0032711 Rosa chinensis HOM05D006014 ORTHO05D007608 3.8e-57 225.3 173 72.8
FvH4_3g19430 Fragaria vesca HOM05D006014 ORTHO05D007608 4.9e-57 224.9 174 73.0
FAN11G2300 Fragaria x ananassa HOM05D006014 ORTHO05D007608 4.9e-57 224.9 174 73.0
Gohir.D05G347800 Gossypium hirsutum HOM05D006014 ORTHO05D007608 4.9e-57 224.9 171 71.3
Gorai.009G375600 Gossypium raimondii HOM05D006014 ORTHO05D007608 4.9e-57 224.9 171 71.3
CiPaw.11G167800 Carya illinoinensis HOM05D006014 ORTHO05D007608 6.4e-57 224.6 153 79.1
Eucgr.F01167 Eucalyptus grandis HOM05D006014 ORTHO05D007608 6.4e-57 224.6 172 73.8
Nn1g04203 Nelumbo nucifera HOM05D006014 ORTHO05D007608 8.4e-57 224.2 184 69.0
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 1.9e-56 223.0 143 82.5
Gohir.A04G035600 Gossypium hirsutum HOM05D006014 ORTHO05D007608 1.9e-56 223.0 171 71.3
FAN25G0078 Fragaria x ananassa HOM05D006014 ORTHO05D007608 2.4e-56 222.6 174 72.4
PGR083G0398 Punica granatum HOM05D006014 ORTHO05D007608 2.4e-56 222.6 176 70.5
Cc05_g11740 Coffea canephora HOM05D006014 ORTHO05D007608 5.4e-56 221.5 179 68.7
MD11G1253300 Malus domestica HOM05D006014 ORTHO05D007608 5.4e-56 221.5 178 70.2
MELO3C025609.2 Cucumis melo HOM05D006014 ORTHO05D007608 7.1e-56 221.1 188 69.1
TWI38G2086 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 3.5e-55 218.8 172 69.8
CsaV3_4G033460 Cucumis sativus L. HOM05D006014 ORTHO05D007608 1.0e-54 217.2 188 68.6
Glyma.12G162300 Glycine max HOM05D006014 ORTHO05D007608 1.7e-54 216.5 169 72.2
Solyc07g062870.3 Solanum lycopersicum HOM05D006014 ORTHO05D007608 5.1e-54 214.9 179 65.9
Sopen07g031070 Solanum pennellii HOM05D006014 ORTHO05D007608 5.1e-54 214.9 179 65.9
Prupe.4G176000 Prunus persica HOM05D006014 ORTHO05D007608 6.6e-54 214.5 188 65.4
TAR624G0768 Trochodendron aralioides HOM05D006014 ORTHO05D007608 1.1e-53 213.8 158 74.1
Nitab4.5_0013317g0010 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.9e-53 213.0 180 65.6
Oeu051088.1 Olea europaea HOM05D006014 ORTHO05D007608 3.3e-53 212.2 176 68.8
Peaxi162Scf00069g01737 Petunia axillaris HOM05D006014 ORTHO05D007608 3.3e-53 212.2 179 65.4
DCAR_019570 Daucus carota HOM05D006014 ORTHO05D007608 9.6e-53 210.7 177 68.9
Duzib170G0605 Durio zibethinus HOM05D006014 ORTHO05D007608 9.6e-53 210.7 179 68.2
Lalb_Chr07g0182891 Lupinus albus HOM05D006014 ORTHO05D007608 2.1e-52 209.5 175 64.6
PGSC0003DMG400012405 Solanum tuberosum HOM05D006014 ORTHO05D007608 1.1e-51 207.2 177 65.0
TPR.G28172 Trifolium pratense HOM05D006014 ORTHO05D007608 1.1e-51 207.2 169 70.4
Glyma.06G236200 Glycine max HOM05D006014 ORTHO05D007608 1.8e-51 206.5 174 69.0
Lj3g0022855 Lotus japonicus HOM05D006014 ORTHO05D007608 5.3e-51 204.9 166 70.5
Ca_23028_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 9.0e-51 204.1 166 69.9
Ca_23030_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 9.0e-51 204.1 166 69.9
Psat4g136440 Pisum sativum HOM05D006014 ORTHO05D007608 1.2e-50 203.8 168 68.5
THA.LOC104815561 Tarenaya hassleriana HOM05D006014 ORTHO05D007608 3.4e-50 202.2 184 65.2
BolC1t04895H Brassica oleracea HOM05D006014 ORTHO05D007608 4.5e-50 201.8 186 63.4
Oeu037371.1 Olea europaea HOM05D006014 ORTHO05D007608 9.9e-50 200.7 163 69.3
Migut.H01957 Erythranthe guttata HOM05D006014 ORTHO05D007608 2.2e-49 199.5 184 63.0
C01p49380 Brassica napus HOM05D006014 ORTHO05D007608 2.9e-49 199.1 182 63.2
A05p34280 Brassica napus HOM05D006014 ORTHO05D007608 4.9e-49 198.4 192 59.9
BraA05t22249Z Brassica rapa HOM05D006014 ORTHO05D007608 4.9e-49 198.4 192 59.9
CDE10G1292 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 4.9e-49 198.4 170 67.6
Lsat_1_v5_gn_5_128220 Lactuca sativa HOM05D006014 ORTHO05D007608 6.4e-49 198.0 178 66.9
CARHR090180 Cardamine hirsuta HOM05D006014 ORTHO05D007608 8.4e-49 197.6 183 62.3
CDE10G0058 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 1.1e-48 197.2 170 67.6
Sc03g0010200 Simmondsia chinensis HOM05D006014 ORTHO05D007608 1.1e-48 197.2 180 65.0
Nitab4.5_0000332g0180 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.4e-48 196.8 179 63.7
PSO675G1148 Papaver somniferum HOM05D006014 ORTHO05D007608 2.4e-48 196.1 180 60.0
Sp3g13400 Schrenkiella parvula HOM05D006014 ORTHO05D007608 3.2e-48 195.7 187 61.0
arahy.Tifrunner.gnm1.ann1.FY4UJ9 Arachis hypogaea HOM05D006014 ORTHO05D007608 5.4e-48 194.9 209 59.3
SalBow8G3070 Salvia bowleyana HOM05D006014 ORTHO05D007608 5.4e-48 194.9 181 62.4
MSTRG.12894 Avicennia marina HOM05D006014 ORTHO05D007608 7.1e-48 194.5 180 63.9
MBI07_g30170_MAGBIO Magnolia biondii HOM05D006014 ORTHO05D007608 9.3e-48 194.1 137 75.2
Cfa020606 Carpinus fangiana HOM05D006014 ORTHO05D007608 1.2e-47 193.7 123 83.7
BcaB06g29543 Brassica carinata HOM05D006014 ORTHO05D007608 1.6e-47 193.4 186 60.2
PSO541G1420 Papaver somniferum HOM05D006014 ORTHO05D007608 1.6e-47 193.4 180 59.4
BcaB04g20944 Brassica carinata HOM05D006014 ORTHO05D007608 2.1e-47 193.0 176 63.6
C05p52040 Brassica napus HOM05D006014 ORTHO05D007608 2.7e-47 192.6 186 59.7
A01p38830 Brassica napus HOM05D006014 ORTHO05D007608 3.5e-47 192.2 180 63.3
BraA01t03929Z Brassica rapa HOM05D006014 ORTHO05D007608 3.5e-47 192.2 180 63.3
VMungo1127G0848 Vigna mungo HOM05D006014 ORTHO05D007608 4.6e-47 191.8 174 63.8
Phvul.011G162800 Phaseolus vulgaris HOM05D006014 ORTHO05D007608 6.0e-47 191.4 169 66.3
A03p39200 Brassica napus HOM05D006014 ORTHO05D007608 7.9e-47 191.0 189 59.8
Hund04492 Selenicereus undatus HOM05D006014 ORTHO05D007608 1.0e-46 190.7 176 63.1
AL3G27580 Arabidopsis lyrata HOM05D006014 ORTHO05D007608 1.8e-46 189.9 181 62.4
AT3G15190 Arabidopsis thaliana HOM05D006014 ORTHO05D007608 2.3e-46 189.5 183 61.7
BraA03t13069Z Brassica rapa HOM05D006014 ORTHO05D007608 2.3e-46 189.5 182 60.4
ECA234G0345 Erigeron canadensis HOM05D006014 ORTHO05D007608 2.3e-46 189.5 179 62.0
Nitab4.5_0002330g0100 Nicotiana tabacum HOM05D006014 ORTHO05D007608 2.3e-46 189.5 197 57.9
HanXRQChr10g0302621 Helianthus annuus HOM05D006014 ORTHO05D007608 3.9e-46 188.7 183 63.4
Ah.06g184580 Amaranthus hybridus HOM05D006014 ORTHO05D007608 5.1e-46 188.3 171 63.2
Medtr8g061350 Medicago truncatula HOM05D006014 ORTHO05D007608 6.7e-46 188.0 176 64.2
Aqoxy1G02326 Aquilegia oxysepala HOM05D006014 ORTHO05D007608 1.9e-45 186.4 176 59.1
Carub.0003s1484 Capsella rubella HOM05D006014 ORTHO05D007608 4.3e-45 185.3 183 60.7
Thhalv10021521m.g Eutrema salsugineum HOM05D006014 ORTHO05D007608 5.6e-45 184.9 190 58.4
Aa31LG8G2390 Aethionema arabicum HOM05D006014 ORTHO05D007608 7.4e-45 184.5 186 58.1
Rhsim04G0022600 Rhododendron simsii HOM05D006014 ORTHO05D007608 9.6e-45 184.1 177 60.5
Sed0026173 Sechium edule HOM05D006014 ORTHO05D007608 1.3e-44 183.7 174 61.5
EL10Ac4g08237 Beta vulgaris HOM05D006014 ORTHO05D007608 1.6e-44 183.3 184 58.7
AUR62036161 Chenopodium quinoa HOM05D006014 ORTHO05D007608 2.8e-44 182.6 184 59.2
AUR62019472 Chenopodium quinoa HOM05D006014 ORTHO05D007608 3.7e-44 182.2 184 59.2
Actinidia35240 Actinidia chinensis HOM05D006014 ORTHO05D007608 3.4e-42 175.6 118 80.5
BcaC01g03887 Brassica carinata HOM05D006014 ORTHO05D007608 5.8e-42 174.9 112 79.5
C03p47570 Brassica napus HOM05D006014 ORTHO05D007608 5.8e-42 174.9 112 79.5
BolC3t17032H Brassica oleracea HOM05D006014 ORTHO05D007608 5.8e-42 174.9 112 79.5
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 2.2e-41 172.9 184 59.8
arahy.Tifrunner.gnm1.ann1.QT5AN8 Arachis hypogaea HOM05D006014 ORTHO05D007608 1.9e-40 169.9 259 46.3
ATR0737G141 Amborella trichopoda HOM05D006014 ORTHO05D007608 4.2e-40 168.7 114 77.2
TWI39G1175 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 2.1e-39 166.4 127 68.5
Lj3g0017472 Lotus japonicus HOM05D006014 ORTHO05D007608 5.0e-33 145.2 118 68.6
Mapoly0009s0159 Marchantia polymorpha HOM05D006014 ORTHO05D007608 5.0e-33 145.2 185 51.4
SEGI_01083 Sequoiadendron giganteum HOM05D006014 ORTHO05D007608 9.3e-32 141.0 173 52.0
Lj8A154T77 Lonicera japonica HOM05D006014 ORTHO05D007608 6.1e-31 138.3 173 50.9
Zm00001eb360330 Zea mays HOM05D006014 ORTHO05D007608 1.1e-29 134.0 171 51.5
Pp3c24_17080 Physcomitrium patens HOM05D006014 ORTHO05D007608 1.8e-27 126.7 126 56.3
BcaC09g48477 Brassica carinata HOM05D006014 ORTHO05D007608 2.4e-27 126.3 140 56.4
CBR_g30802 Chara braunii HOM05D006014 ORTHO05D007608 3.1e-27 125.9 123 55.3
SGA_v2.0_scaffold70G23686 Striga asiatica HOM05D006014 ORTHO05D007608 3.1e-27 125.9 352 33.0
Os01g0678600 Oryza sativa ssp. japonica HOM05D006014 ORTHO05D007608 5.3e-27 125.2 123 57.7
AagrBONN_evm.TU.Sc2ySwM_344.3794 Anthoceros agrestis HOM05D006014 ORTHO05D007608 2.5e-24 116.3 184 44.6
vmacro09523 Vaccinium macrocarpon HOM05D006014 ORTHO05D007608 2.7e-23 112.8 83 69.9
Pp3c20_13390 Physcomitrium patens HOM05D006014 ORTHO05D007608 3.6e-23 112.5 107 57.0
Dinv20203 Davidia involucrata HOM05D006014 ORTHO05D007608 2.0e-21 106.7 115 60.9
Cpa.g.sc131.85 Carica papaya HOM05D006014 ORTHO05D007608 1.8e-19 100.1 108 63.9
CBR_g39307 Chara braunii HOM05D006014 ORTHO05D007608 1.8e-19 100.1 77 64.9
Gohir.A13G146850 Gossypium hirsutum HOM05D006014 ORTHO05D007608 4.2e-16 89.0 71 67.6
Cre12.g494750 Chlamydomonas reinhardtii HOM05D006014 ORTHO05D007608 1.6e-15 87.0 107 49.5
HPP92_010061 Vanilla planifolia HOM05D006014 ORTHO05D007608 1.7e-12 77.0 115 45.2
MCO10G118 Micromonas commoda HOM05D006014 ORTHO05D007608 2.8e-12 76.3 91 47.3
Atru.chr2.2408 Acer truncatum HOM05D006014 ORTHO05D007608 1.0e-09 67.8 53 66.0
QL11p029078 Quercus lobata HOM05D006014 ORTHO05D013998 4.2e-08 62.4 40 80.0


User provided reference genes

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