Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 5.0e-296 1020.4 526 100.0
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 3.2e-218 761.9 525 74.3
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 1.1e-213 746.9 525 73.7
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 3.1e-213 745.3 525 73.7
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 9.0e-213 743.8 528 73.7
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 1.2e-212 743.4 528 73.9
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 3.4e-212 741.9 526 72.6
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 1.4e-210 736.5 525 71.6
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 4.2e-210 734.9 525 72.8
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 1.6e-209 733.0 525 72.2
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 1.3e-208 729.9 525 73.7
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.9e-207 726.1 525 71.0
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 4.3e-207 724.9 525 72.4
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 1.3e-206 723.4 525 72.0
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 2.8e-206 722.2 525 72.6
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 8.2e-206 720.7 525 71.4
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 1.4e-205 719.9 526 70.9
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 1.8e-205 719.5 525 72.0
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 8.4e-203 710.7 540 69.1
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 1.4e-202 709.9 548 68.6
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 5.5e-202 708.0 548 68.4
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 1.6e-201 706.4 525 70.7
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 2.7e-201 705.7 519 71.7
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 6.1e-201 704.5 537 69.8
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 7.9e-201 704.1 526 68.3
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 1.0e-200 703.7 526 68.6
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 1.8e-200 703.0 526 68.6
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 1.1e-199 700.3 525 69.5
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 1.9e-199 699.5 526 70.2
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 1.9e-199 699.5 524 69.7
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 3.3e-199 698.7 540 66.9
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 9.7e-199 697.2 526 69.0
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 3.7e-198 695.3 524 69.7
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 8.2e-198 694.1 525 69.3
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 1.8e-197 693.0 527 69.4
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 3.4e-196 688.7 525 69.3
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 5.0e-195 684.9 527 68.7
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 3.6e-193 678.7 525 68.4
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 7.9e-193 677.6 525 68.2
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 1.4e-192 676.8 525 69.3
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 5.1e-192 674.9 519 68.8
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 5.1e-192 674.9 519 68.8
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 1.1e-191 673.7 526 66.9
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 2.5e-191 672.5 526 67.3
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 1.7e-190 669.8 569 64.3
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 2.2e-190 669.5 525 67.6
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 4.1e-189 665.2 539 66.2
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 1.5e-188 663.3 514 66.3
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 2.6e-188 662.5 526 65.8
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 1.4e-186 656.8 526 64.8
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 2.1e-185 652.9 525 65.1
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 7.9e-185 651.0 525 65.0
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 7.9e-185 651.0 643 57.9
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 7.9e-185 651.0 526 64.8
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.4e-184 650.2 525 65.7
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 1.8e-184 649.8 526 64.8
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 3.0e-184 649.0 525 64.0
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 3.9e-184 648.7 526 64.6
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 2.8e-182 642.5 527 64.5
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 3.1e-181 639.0 526 63.3
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 1.2e-180 637.1 465 71.0
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 8.5e-179 630.9 526 63.1
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 3.0e-176 622.5 556 61.2
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 8.2e-174 614.4 525 62.5
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 1.2e-172 610.5 526 63.5
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 3.2e-170 602.4 521 59.3
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 7.2e-170 601.3 521 59.9
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 4.7e-169 598.6 525 59.4
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 1.4e-168 597.0 521 59.5
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 1.7e-166 590.1 521 59.9
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 3.7e-166 589.0 521 58.5
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 5.4e-165 585.1 525 62.1
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 3.5e-164 582.4 470 64.3
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 4.5e-164 582.0 521 59.7
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 4.5e-164 582.0 521 57.6
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 3.2e-162 575.9 527 58.6
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 4.2e-162 575.5 574 56.4
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 1.2e-159 567.4 547 55.0
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 1.2e-159 567.4 535 55.9
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 3.4e-159 565.8 503 58.3
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 3.7e-158 562.4 532 57.3
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 1.0e-155 554.3 517 57.4
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 3.3e-154 549.3 521 55.9
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 6.1e-153 545.0 447 63.5
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 5.9e-148 528.5 423 67.4
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 1.0e-147 527.7 451 63.6
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 1.3e-147 527.3 389 71.0
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 7.0e-141 505.0 516 50.8
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 3.6e-137 492.7 516 50.2
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 4.4e-135 485.7 392 65.1
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 1.6e-132 477.2 413 63.9
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 2.8e-121 439.9 556 47.8
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 1.5e-119 434.1 526 48.9
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 5.8e-111 405.6 328 65.5
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 1.2e-108 397.9 328 64.0
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 1.5e-98 364.4 290 63.8
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 1.5e-98 364.4 290 63.8
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 1.2e-92 344.7 378 51.6
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 2.1e-89 334.0 236 75.4
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 3.4e-87 326.6 370 53.2
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 5.0e-86 322.8 513 38.4
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 5.1e-83 312.8 541 35.9
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 7.2e-77 292.4 523 36.3
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 4.6e-76 289.7 195 74.9
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 2.8e-73 280.4 292 57.9
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 8.2e-73 278.9 268 57.1
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 2.2e-62 244.2 229 56.3
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 6.7e-59 232.6 172 68.0
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 1.4e-56 224.9 163 68.1
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 1.8e-56 224.6 213 57.7
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 6.1e-52 209.5 461 32.5
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 5.4e-40 169.9 290 39.0
QL08p023949 Quercus lobata HOM05D005607 ORTHO05D008142 1.1e-37 162.2 104 76.0
FAN25G1444 Fragaria x ananassa HOM05D005607 ORTHO05D008142 8.9e-35 152.5 111 66.7
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.1e-29 135.6 124 54.8
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.7e-22 111.7 182 37.9
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 4.3e-21 107.1 95 62.1
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 3.4e-18 97.4 101 49.5
HanXRQChr10g0304121 Helianthus annuus HOM05D005607 ORTHO05D008142 1.4e-11 75.5 116 49.1
CBR_g2888 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-10 72.0 77 46.8
MELO3C030698.2 Cucumis melo HOM05D005607 ORTHO05D169846 1.7e-09 68.6 97 46.4
SEGI_12563 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 4.9e-09 67.0 73 52.1
MELO3C033981.2 Cucumis melo HOM05D005607 ORTHO05D166899 7.1e-08 63.2 69 55.1
RcHm_v2.0_Chr1g0340011 Rosa chinensis HOM05D005607 ORTHO05D008142 6.0e-07 60.1 69 55.1
RcHm_v2.0_Chr1g0357081 Rosa chinensis HOM05D005607 ORTHO05D340723 5.1e-06 57.0 55 60.0


User provided reference genes

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