Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014263001 Vitis vinifera HOM05D005433 ORTHO05D006675 2.3e-143 512.3 278 100.0
CiPaw.12G116900 Carya illinoinensis HOM05D005433 ORTHO05D006675 1.8e-87 326.6 284 67.3
TAR624G0745 Trochodendron aralioides HOM05D005433 ORTHO05D006675 7.6e-86 321.2 283 66.1
QL08p023594 Quercus lobata HOM05D005433 ORTHO05D006675 1.7e-85 320.1 290 66.2
CSS0020446 Camellia sinensis var. sinensis HOM05D005433 ORTHO05D006675 4.2e-84 315.5 288 66.3
Cfa020622 Carpinus fangiana HOM05D005433 ORTHO05D006675 2.7e-83 312.8 285 64.2
Haze_09383 Corylus avellana HOM05D005433 ORTHO05D006675 3.3e-81 305.8 287 62.7
Thecc.07G099400 Theobroma cacao HOM05D005433 ORTHO05D006675 9.6e-81 304.3 288 64.9
Cpa.g.sc80.11 Carica papaya HOM05D005433 ORTHO05D006675 2.1e-80 303.1 274 65.7
MD03G1235600 Malus domestica HOM05D005433 ORTHO05D006675 1.1e-79 300.8 292 63.4
Hma1.2p1_0416F.1_g148475 Hydrangea macrophylla HOM05D005433 ORTHO05D006675 1.4e-79 300.4 247 72.9
PGR083G2284 Punica granatum HOM05D005433 ORTHO05D006675 3.1e-79 299.3 287 65.5
Duzib213G0446 Durio zibethinus HOM05D005433 ORTHO05D006675 3.4e-78 295.8 286 63.3
Gohir.A01G060400 Gossypium hirsutum HOM05D005433 ORTHO05D006675 1.3e-77 293.9 287 65.2
Gohir.D01G046900 Gossypium hirsutum HOM05D005433 ORTHO05D006675 2.2e-77 293.1 287 65.2
Gorai.002G066400 Gossypium raimondii HOM05D005433 ORTHO05D006675 2.2e-77 293.1 287 65.2
Nn1g06380 Nelumbo nucifera HOM05D005433 ORTHO05D006675 4.9e-77 292.0 292 61.3
Nitab4.5_0001208g0170 Nicotiana tabacum HOM05D005433 ORTHO05D006675 4.2e-76 288.9 287 61.7
Nitab4.5_0005232g0030 Nicotiana tabacum HOM05D005433 ORTHO05D006675 1.2e-75 287.3 287 62.0
ClCG05G009210 Citrullus lanatus HOM05D005433 ORTHO05D006675 2.1e-75 286.6 290 61.0
Sabra11G0091300 Salix brachista HOM05D005433 ORTHO05D006675 7.9e-75 284.6 276 62.0
Ciclev10009151m.g Citrus clementina HOM05D005433 ORTHO05D006675 1.3e-74 283.9 290 62.4
PGSC0003DMG400021311 Solanum tuberosum HOM05D005433 ORTHO05D006675 3.0e-74 282.7 283 60.4
Eucgr.F01178 Eucalyptus grandis HOM05D005433 ORTHO05D006675 1.1e-73 280.8 268 62.7
RcHm_v2.0_Chr5g0032261 Rosa chinensis HOM05D005433 ORTHO05D006675 1.5e-73 280.4 290 59.0
Potri.011G097800 Populus trichocarpa HOM05D005433 ORTHO05D006675 2.5e-73 279.6 268 63.4
TWI38G0185 Tripterygium wilfordii HOM05D005433 ORTHO05D006675 2.5e-73 279.6 277 61.4
Lalb_Chr25g0286191 Lupinus albus HOM05D005433 ORTHO05D006675 1.6e-72 276.9 233 67.0
Peaxi162Scf00027g01311 Petunia axillaris HOM05D005433 ORTHO05D006675 1.6e-72 276.9 270 62.2
CAN.G1119.17 Capsicum annuum HOM05D005433 ORTHO05D006675 2.2e-72 276.6 268 61.2
Manes.03G104600 Manihot esculenta HOM05D005433 ORTHO05D006675 2.8e-72 276.2 285 63.2
MBI07_g32542_MAGBIO Magnolia biondii HOM05D005433 ORTHO05D006675 3.7e-72 275.8 273 62.3
Sopen10g003020 Solanum pennellii HOM05D005433 ORTHO05D006675 1.4e-71 273.9 290 57.9
Actinidia35236 Actinidia chinensis HOM05D005433 ORTHO05D006675 3.1e-71 272.7 292 60.3
CsaV3_3G019570 Cucumis sativus L. HOM05D005433 ORTHO05D006675 5.3e-71 271.9 285 59.6
arahy.Tifrunner.gnm1.ann1.H96BGA Arachis hypogaea HOM05D005433 ORTHO05D006675 6.9e-71 271.6 268 60.4
EL10Ac4g08262 Beta vulgaris HOM05D005433 ORTHO05D006675 9.0e-71 271.2 269 62.5
FvH4_3g19170 Fragaria vesca HOM05D005433 ORTHO05D006675 9.0e-71 271.2 293 58.0
Solyc10g007120.4 Solanum lycopersicum HOM05D005433 ORTHO05D006675 1.2e-70 270.8 290 58.6
FAN11G1719 Fragaria x ananassa HOM05D005433 ORTHO05D006675 2.0e-70 270.0 294 58.8
PSO675G6755 Papaver somniferum HOM05D005433 ORTHO05D006675 2.0e-70 270.0 280 61.4
arahy.Tifrunner.gnm1.ann1.7LX6SY Arachis hypogaea HOM05D005433 ORTHO05D006675 7.7e-70 268.1 228 67.1
Aqoxy4G00583 Aquilegia oxysepala HOM05D005433 ORTHO05D006675 1.0e-69 267.7 284 60.2
Cc05_g11610 Coffea canephora HOM05D005433 ORTHO05D006675 1.0e-69 267.7 284 58.8
FAN25G0011 Fragaria x ananassa HOM05D005433 ORTHO05D006675 2.2e-69 266.5 293 57.3
Sc16g0007310 Simmondsia chinensis HOM05D005433 ORTHO05D006675 2.2e-69 266.5 284 59.2
AUR62036145 Chenopodium quinoa HOM05D005433 ORTHO05D006675 2.9e-69 266.2 247 63.6
CANSAT35G1219 Cannabis sativa HOM05D005433 ORTHO05D006675 3.8e-69 265.8 269 62.5
DCAR_019573 Daucus carota HOM05D005433 ORTHO05D006675 5.0e-69 265.4 282 62.8
PSO541G1927 Papaver somniferum HOM05D005433 ORTHO05D006675 5.0e-69 265.4 282 60.6
Rhsim04G0023000 Rhododendron simsii HOM05D005433 ORTHO05D006675 8.5e-69 264.6 289 60.6
vmacro09517 Vaccinium macrocarpon HOM05D005433 ORTHO05D006675 8.5e-69 264.6 318 55.3
FAN16G0161 Fragaria x ananassa HOM05D005433 ORTHO05D006675 4.2e-68 262.3 295 56.6
Glyma.12G227200 Glycine max HOM05D005433 ORTHO05D006675 4.2e-68 262.3 271 60.9
Lsat_1_v5_gn_5_127421 Lactuca sativa HOM05D005433 ORTHO05D006675 3.6e-67 259.2 261 63.6
Lj3g0015051 Lotus japonicus HOM05D005433 ORTHO05D006675 3.6e-67 259.2 287 58.2
CDE10G1174 Ceratophyllum demersum HOM05D005433 ORTHO05D006675 6.7e-66 255.0 251 61.4
FAN21G1059 Fragaria x ananassa HOM05D005433 ORTHO05D006675 6.7e-66 255.0 291 56.7
VMungo0331G0725 Vigna mungo HOM05D005433 ORTHO05D006675 8.8e-66 254.6 282 59.2
ECA234G3266 Erigeron canadensis HOM05D005433 ORTHO05D006675 1.1e-65 254.2 277 58.5
THA.LOC104810456 Tarenaya hassleriana HOM05D005433 ORTHO05D006675 3.3e-65 252.7 288 56.2
SalBow8G0584 Salvia bowleyana HOM05D005433 ORTHO05D006675 1.4e-63 247.3 294 57.1
Dinv14949 Davidia involucrata HOM05D005433 ORTHO05D006675 2.4e-63 246.5 205 72.2
A05p34330 Brassica napus HOM05D005433 ORTHO05D006675 3.1e-63 246.1 294 54.8
Phvul.010G112200 Phaseolus vulgaris HOM05D005433 ORTHO05D006675 5.3e-63 245.4 275 56.7
C05p52110 Brassica napus HOM05D005433 ORTHO05D006675 6.9e-63 245.0 294 54.1
BolC5t33896H Brassica oleracea HOM05D005433 ORTHO05D006675 6.9e-63 245.0 294 54.1
SGA_v2.0_scaffold73G24224 Striga asiatica HOM05D005433 ORTHO05D006675 6.9e-63 245.0 264 57.6
Aa31LG8G2320 Aethionema arabicum HOM05D005433 ORTHO05D006675 1.5e-62 243.8 288 55.9
BcaB06g29536 Brassica carinata HOM05D005433 ORTHO05D006675 1.5e-62 243.8 294 53.7
BraA05t22254Z Brassica rapa HOM05D005433 ORTHO05D006675 4.5e-62 242.3 294 54.1
Migut.M00771 Erythranthe guttata HOM05D005433 ORTHO05D006675 2.9e-61 239.6 271 57.9
Gorai.007G325500 Gossypium raimondii HOM05D005433 ORTHO05D006675 2.9e-61 239.6 275 56.7
HanXRQChr10g0302491 Helianthus annuus HOM05D005433 ORTHO05D006675 3.8e-61 239.2 271 58.7
Gohir.A11G286600 Gossypium hirsutum HOM05D005433 ORTHO05D006675 6.5e-61 238.4 278 55.8
AL3G27460 Arabidopsis lyrata HOM05D005433 ORTHO05D006675 8.5e-61 238.0 255 56.1
Gohir.D11G306500 Gossypium hirsutum HOM05D005433 ORTHO05D006675 3.2e-60 236.1 278 56.5
Ca_03534_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 5.5e-60 235.3 277 54.9
Ca_30930_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 5.5e-60 235.3 277 54.9
Sp3g13310 Schrenkiella parvula HOM05D005433 ORTHO05D006675 7.2e-60 235.0 295 52.9
TPR.G17538 Trifolium pratense HOM05D005433 ORTHO05D006675 1.6e-59 233.8 227 59.5
Prupe.4G173400 Prunus persica HOM05D005433 ORTHO05D006675 3.6e-59 232.6 225 64.4
MSTRG.15245 Avicennia marina HOM05D005433 ORTHO05D006675 4.7e-59 232.3 279 57.0
Carub.0003s1475 Capsella rubella HOM05D005433 ORTHO05D006675 4.7e-59 232.3 290 52.1
Thhalv10021284m.g Eutrema salsugineum HOM05D005433 ORTHO05D006675 1.4e-58 230.7 297 53.9
ATR0602G229 Amborella trichopoda HOM05D005433 ORTHO05D006675 3.0e-58 229.6 249 58.6
Psat5g241440 Pisum sativum HOM05D005433 ORTHO05D006675 3.9e-58 229.2 247 55.9
AT3G15110 Arabidopsis thaliana HOM05D005433 ORTHO05D006675 5.1e-58 228.8 284 54.2
Atru.chr2.2384 Acer truncatum HOM05D005433 ORTHO05D006675 5.7e-57 225.3 205 62.9
MD11G1256600 Malus domestica HOM05D005433 ORTHO05D006675 4.8e-56 222.2 204 66.2
unitig_85.g27411 Utricularia gibba HOM05D005433 ORTHO05D006675 2.4e-55 219.9 283 50.5
unitig_86.g29837 Utricularia gibba HOM05D005433 ORTHO05D006675 2.4e-55 219.9 283 50.5
Medtr2g078540 Medicago truncatula HOM05D005433 ORTHO05D006675 1.5e-54 217.2 271 50.9
Os02g0307800 Oryza sativa ssp. japonica HOM05D005433 ORTHO05D006675 2.6e-54 216.5 258 55.8
Glyma.06G235100 Glycine max HOM05D005433 ORTHO05D006675 6.5e-53 211.8 253 55.3
Zm00001eb235270 Zea mays HOM05D005433 ORTHO05D006675 2.1e-51 206.8 274 51.8
MSTRG.12890 Avicennia marina HOM05D005433 ORTHO05D006675 2.2e-48 196.8 283 49.8
AUR62019491 Chenopodium quinoa HOM05D005433 ORTHO05D006675 4.8e-48 195.7 252 54.0
Lj2g0011732 Lotus japonicus HOM05D005433 ORTHO05D006675 5.3e-47 192.2 276 47.8
Sed0015039 Sechium edule HOM05D005433 ORTHO05D006675 7.0e-47 191.8 153 68.6
Lj8A153T41 Lonicera japonica HOM05D005433 ORTHO05D006675 9.1e-47 191.4 191 64.4
Medtr6g042030 Medicago truncatula HOM05D005433 ORTHO05D006675 1.9e-44 183.7 165 65.5
Thecc.07G099700 Theobroma cacao HOM05D005433 ORTHO05D006675 2.3e-42 176.8 142 69.0
Migut.H01964 Erythranthe guttata HOM05D005433 ORTHO05D006675 8.8e-42 174.9 213 53.5
Psat1g075280 Pisum sativum HOM05D005433 ORTHO05D006675 8.8e-42 174.9 261 46.4
arahy.Tifrunner.gnm1.ann1.2X8QJZ Arachis hypogaea HOM05D005433 ORTHO05D006675 5.3e-39 165.6 272 45.2
HPP92_027387 Vanilla planifolia HOM05D005433 ORTHO05D006675 7.0e-39 165.2 191 54.5
arahy.Tifrunner.gnm1.ann1.8TDA44 Arachis hypogaea HOM05D005433 ORTHO05D006675 7.7e-38 161.8 280 45.0
TPR.G19712 Trifolium pratense HOM05D005433 ORTHO05D006675 3.8e-37 159.5 269 45.7
AagrBONN_evm.TU.Sc2ySwM_368.1222 Anthoceros agrestis HOM05D005433 ORTHO05D006675 3.6e-35 152.9 203 47.3
Pp3c11_19700 Physcomitrium patens HOM05D005433 ORTHO05D006675 4.7e-35 152.5 195 50.3
Mapoly0060s0103 Marchantia polymorpha HOM05D005433 ORTHO05D006675 2.3e-34 150.2 172 54.7
Lsat_1_v5_gn_7_42380 Lactuca sativa HOM05D005433 ORTHO05D006675 8.3e-32 141.7 141 62.4
C09p61630 Brassica napus HOM05D005433 ORTHO05D006675 2.3e-29 133.7 157 53.5
BolC9t59001H Brassica oleracea HOM05D005433 ORTHO05D006675 2.3e-29 133.7 157 53.5
C02p31450 Brassica napus HOM05D005433 ORTHO05D006675 2.8e-27 126.7 102 67.6
SGA_v2.0_scaffold70G23696 Striga asiatica HOM05D005433 ORTHO05D006675 8.0e-27 125.2 123 60.2
Lsat_1_v5_gn_0_4360 Lactuca sativa HOM05D005433 ORTHO05D006675 6.8e-26 122.1 145 55.9
SMO143G0248 Selaginella moellendorffii HOM05D009232 ORTHO05D006675 2.2e-24 117.1 188 43.1
Glyma.13G273100 Glycine max HOM05D005433 ORTHO05D006675 3.7e-24 116.3 146 55.5
Lalb_Chr03g0030801 Lupinus albus HOM05D005433 ORTHO05D006675 2.4e-23 113.6 144 50.0
CBR_g28819 Chara braunii HOM05D005433 ORTHO05D006675 1.2e-22 111.3 236 40.7
Oeu051093.1 Olea europaea HOM05D005433 ORTHO05D006675 5.0e-21 105.9 163 46.0
Oeu051094.1 Olea europaea HOM05D005433 ORTHO05D006675 3.3e-20 103.2 231 39.0
BcaB01g02390 Brassica carinata HOM05D005433 ORTHO05D006675 8.0e-19 98.6 206 41.7
CARHR090080 Cardamine hirsuta HOM05D005433 ORTHO05D006675 9.8e-17 91.7 74 67.6
EL10Ac5g11588 Beta vulgaris HOM05D005433 ORTHO05D006675 3.7e-16 89.7 70 70.0
Oeu055126.1 Olea europaea HOM05D005433 ORTHO05D006675 7.0e-15 85.5 127 48.8
TAR629G0034 Trochodendron aralioides HOM05D005433 ORTHO05D006675 1.3e-13 81.3 81 58.0
MCO01G315 Micromonas commoda HOM05D005433 ORTHO05D006675 2.3e-13 80.5 174 33.3
Cre03.g167400 Chlamydomonas reinhardtii HOM05D005433 ORTHO05D006675 1.1e-10 71.6 181 30.9
Lsat_1_v5_gn_4_180780 Lactuca sativa HOM05D005433 ORTHO05D006675 2.3e-10 70.5 59 67.8
Lsat_1_v5_gn_5_140640 Lactuca sativa HOM05D005433 ORTHO05D006675 3.7e-08 63.2 40 75.0
Actinidia09909 Actinidia chinensis HOM05D005433 ORTHO05D006675 6.4e-08 62.4 43 74.4
C01p49410 Brassica napus HOM05D005433 ORTHO05D040690 6.0e-06 55.8 147 34.0


User provided reference genes

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