Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 0.0e+00 1079.7 528 100.0
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 4.0e-229 798.1 579 70.1
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 2.4e-221 772.3 628 64.0
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 7.6e-220 767.3 592 66.7
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 2.9e-219 765.4 600 65.7
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 5.5e-218 761.1 583 67.9
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 1.2e-217 760.0 591 66.5
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 2.3e-216 755.7 579 65.6
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 4.8e-214 748.0 580 66.7
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 8.2e-214 747.3 585 65.8
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 4.1e-213 745.0 607 63.8
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 2.0e-212 742.7 584 65.8
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.0e-211 740.3 588 64.3
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 8.5e-211 737.3 572 64.9
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.9e-210 736.1 607 62.4
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 1.4e-208 729.9 611 62.0
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 3.0e-208 728.8 594 64.1
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 6.7e-208 727.6 598 62.9
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 6.7e-208 727.6 590 63.6
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 2.5e-207 725.7 592 63.0
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 3.3e-207 725.3 612 61.9
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 1.7e-206 723.0 594 62.8
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 3.7e-206 721.8 590 62.7
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 4.8e-206 721.5 589 63.5
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 2.4e-205 719.2 601 62.9
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 3.1e-205 718.8 592 62.8
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 9.1e-205 717.2 598 63.5
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 7.7e-204 714.1 595 61.7
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 1.0e-203 713.8 608 62.0
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 3.8e-203 711.8 542 64.4
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 8.5e-203 710.7 586 63.3
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 8.5e-203 710.7 595 61.0
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 3.2e-202 708.8 594 62.1
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 1.2e-201 706.8 595 61.0
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 3.9e-200 701.8 600 61.8
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 3.9e-200 701.8 505 69.3
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 5.1e-200 701.4 593 60.4
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 8.8e-200 700.7 602 59.5
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 1.1e-199 700.3 605 60.0
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 2.0e-199 699.5 611 59.7
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 7.4e-199 697.6 624 59.1
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 2.8e-198 695.7 622 58.2
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 2.8e-198 695.7 592 62.0
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 4.8e-198 694.9 617 61.3
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.8e-197 693.0 586 62.5
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 3.1e-197 692.2 605 60.3
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 5.3e-197 691.4 596 60.4
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.5e-196 689.9 534 67.0
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 2.6e-196 689.1 588 61.4
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 3.4e-196 688.7 579 62.0
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 1.0e-195 687.2 557 63.9
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 1.7e-195 686.4 611 59.6
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 2.2e-195 686.0 603 58.7
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 2.2e-195 686.0 570 62.1
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 3.8e-195 685.3 601 58.6
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 8.5e-195 684.1 589 60.3
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 1.1e-194 683.7 615 60.2
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 1.9e-194 682.9 607 60.0
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 3.2e-194 682.2 608 58.2
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 4.2e-194 681.8 601 58.2
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 9.4e-194 680.6 577 60.8
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 1.2e-193 680.2 594 61.1
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 2.1e-193 679.5 548 64.1
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 2.1e-193 679.5 552 62.5
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 3.6e-193 678.7 616 59.3
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 3.6e-193 678.7 604 60.8
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 4.7e-193 678.3 584 60.4
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 8.0e-193 677.6 548 63.3
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 3.9e-192 675.2 592 60.1
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 1.5e-191 673.3 598 58.9
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 9.7e-191 670.6 594 59.3
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 2.2e-187 659.4 575 60.7
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 6.5e-187 657.9 528 62.3
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 8.5e-187 657.5 604 56.8
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 4.2e-186 655.2 613 57.1
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 4.2e-186 655.2 610 55.9
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 2.7e-185 652.5 607 56.7
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 1.4e-184 650.2 604 56.3
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 1.4e-184 650.2 604 56.3
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 1.8e-184 649.8 606 55.9
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 3.0e-184 649.0 614 56.4
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 1.5e-183 646.7 612 55.6
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 3.3e-183 645.6 622 55.5
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 3.3e-183 645.6 557 60.7
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 3.3e-183 645.6 542 61.3
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 6.3e-182 641.3 605 56.7
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 1.5e-178 630.2 593 55.3
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 5.7e-175 618.2 471 66.5
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 1.4e-173 613.6 419 71.8
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 1.8e-173 613.2 621 53.1
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 2.4e-173 612.8 528 60.4
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 1.9e-170 603.2 590 54.4
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 4.9e-166 588.6 604 53.0
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 6.3e-166 588.2 569 57.3
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 8.6e-155 551.2 609 50.6
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 4.7e-153 545.4 399 64.4
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 3.1e-144 516.2 524 54.2
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 1.2e-143 514.2 439 60.4
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 1.0e-139 501.1 533 51.4
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.6e-137 493.8 414 61.4
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 1.9e-101 374.0 324 61.4
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 3.9e-99 366.3 340 57.4
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 7.2e-85 318.9 499 37.9
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 1.8e-48 198.0 275 39.3
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 4.1e-48 196.8 457 31.5
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 2.0e-47 194.5 515 29.1
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 4.5e-47 193.4 275 38.9
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 8.6e-46 189.1 395 30.6
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 9.5e-37 159.1 144 57.6
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 1.9e-32 144.8 90 70.0
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 2.4e-24 117.9 64 84.4
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 3.2e-24 117.5 98 66.3
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 4.1e-24 117.1 73 72.6
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 5.4e-24 116.7 124 55.6
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 6.6e-22 109.8 67 73.1
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 3.3e-21 107.5 58 81.0
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 8.4e-17 92.8 265 28.7


User provided reference genes

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