Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014146001 Vitis vinifera HOM05D000054 ORTHO05D015321 9.8e-22 105.9 54 100.0
GSVIVG01014138001 Vitis vinifera HOM05D000054 ORTHO05D000171 2.0e-11 71.6 46 76.1
GSVIVG01014140001 Vitis vinifera HOM05D000054 ORTHO05D000171 5.9e-11 70.1 46 73.9
GSVIVG01014145001 Vitis vinifera HOM05D000054 ORTHO05D000171 5.9e-11 70.1 46 73.9
GSVIVG01014149001 Vitis vinifera HOM05D000054 ORTHO05D000171 5.9e-11 70.1 46 73.9
GSVIVG01014147001 Vitis vinifera HOM05D000054 ORTHO05D000171 1.1e-09 65.9 46 71.7
Rhsim04G0035500 Rhododendron simsii HOM05D000054 ORTHO05D000171 8.0e-08 59.7 46 63.0
GSVIVG01014134001 Vitis vinifera HOM05D000054 ORTHO05D000171 8.0e-08 59.7 46 65.2
Dinv13369 Davidia involucrata HOM05D000054 ORTHO05D000171 1.0e-07 59.3 46 65.2
vmacro09410 Vaccinium macrocarpon HOM05D000054 ORTHO05D000171 1.0e-07 59.3 46 65.2
CiPaw.12G111500 Carya illinoinensis HOM05D000054 ORTHO05D000171 1.8e-07 58.5 46 65.2
Cc05_g10840 Coffea canephora HOM05D000054 ORTHO05D000171 1.8e-07 58.5 46 63.0
Rhsim04G0036300 Rhododendron simsii HOM05D000054 ORTHO05D000171 2.3e-07 58.2 46 63.0
CSS0033063 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 3.1e-07 57.8 46 58.7
Dinv15014 Davidia involucrata HOM05D000054 ORTHO05D000171 3.1e-07 57.8 46 63.0
vmacro09409 Vaccinium macrocarpon HOM05D000054 ORTHO05D000171 3.1e-07 57.8 50 60.0
vmacro09404 Vaccinium macrocarpon HOM05D000054 ORTHO05D000171 4.0e-07 57.4 45 62.2
CiPaw.11G158000 Carya illinoinensis HOM05D000054 ORTHO05D000171 6.8e-07 56.6 46 63.0
Dinv15010 Davidia involucrata HOM05D000054 ORTHO05D005077 6.8e-07 56.6 45 66.7
PGR083G0379 Punica granatum HOM05D000054 ORTHO05D000171 6.8e-07 56.6 45 60.0
CiPaw.11G157800 Carya illinoinensis HOM05D000054 ORTHO05D000171 8.9e-07 56.2 46 65.2
QL10p027809 Quercus lobata HOM05D000054 ORTHO05D000171 1.2e-06 55.8 46 65.2
Hma1.2p1_0325F.1_g125780 Hydrangea macrophylla HOM05D000054 ORTHO05D015321 1.5e-06 55.5 46 63.0
Hma1.2p1_2701F.1_g327065 Hydrangea macrophylla HOM05D000054 ORTHO05D015321 1.5e-06 55.5 46 63.0
Potri.001G385400 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.5e-06 55.5 47 57.4
Potri.001G385900 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.5e-06 55.5 47 57.4
Potri.003G025800 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.5e-06 55.5 47 57.4
CiPaw.11G157900 Carya illinoinensis HOM05D000054 ORTHO05D000171 2.0e-06 55.1 46 63.0
RcHm_v2.0_Chr5g0029911 Rosa chinensis HOM05D000054 ORTHO05D000171 2.0e-06 55.1 46 60.9
RcHm_v2.0_Chr5g0029981 Rosa chinensis HOM05D000054 ORTHO05D000171 2.0e-06 55.1 46 60.9
Ca_03938_v3 Cicer arietinum L. HOM05D000054 ORTHO05D000171 2.6e-06 54.7 46 60.9
QL08p025818 Quercus lobata HOM05D000054 ORTHO05D000171 2.6e-06 54.7 46 63.0
CiPaw.11G157700 Carya illinoinensis HOM05D000054 ORTHO05D000171 3.4e-06 54.3 46 60.9
CiPaw.11G158100 Carya illinoinensis HOM05D000054 ORTHO05D000171 3.4e-06 54.3 46 63.0
Oeu058463.2 Olea europaea HOM05D000054 ORTHO05D000171 3.4e-06 54.3 46 60.9
Phvul.011G167800 Phaseolus vulgaris HOM05D000054 ORTHO05D000171 3.4e-06 54.3 50 58.0
Prupe.4G158000 Prunus persica HOM05D000054 ORTHO05D000171 3.4e-06 54.3 46 58.7
Rhsim06G0211100 Rhododendron simsii HOM05D000054 ORTHO05D000171 3.4e-06 54.3 46 56.5
Oeu010024.1 Olea europaea HOM05D000054 ORTHO05D015321 4.4e-06 53.9 46 60.9
QL02p081039 Quercus lobata HOM05D000054 ORTHO05D000171 4.4e-06 53.9 46 63.0
CsaV3_4G032890 Cucumis sativus L. HOM05D000054 ORTHO05D000171 5.8e-06 53.5 46 60.9
Hma1.2p1_0050F.1_g028940 Hydrangea macrophylla HOM05D000054 ORTHO05D000171 5.8e-06 53.5 55 56.4
MBI06_g10741_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D000171 5.8e-06 53.5 55 50.9
Lj1A826T68 Lonicera japonica HOM05D000054 ORTHO05D000171 7.5e-06 53.1 55 54.5
Nitab4.5_0000035g0400 Nicotiana tabacum HOM05D000054 ORTHO05D000171 7.5e-06 53.1 46 60.9
Nitab4.5_0003166g0030 Nicotiana tabacum HOM05D000054 ORTHO05D000171 7.5e-06 53.1 46 60.9
TPR.G13171 Trifolium pratense HOM05D000054 ORTHO05D000171 7.5e-06 53.1 46 58.7
Nn6g34454 Nelumbo nucifera HOM05D000054 ORTHO05D000171 9.8e-06 52.8 46 58.7


User provided reference genes

Program Settings