Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013998001 Vitis vinifera HOM05D002866 ORTHO05D008929 3.1e-40 167.9 80 100.0
GSVIVG01013991001 Vitis vinifera HOM05D002866 ORTHO05D008929 4.5e-39 164.1 80 97.5
Cfa013559 Carpinus fangiana HOM05D002866 ORTHO05D008929 5.5e-37 157.1 80 91.2
QL05p020902 Quercus lobata HOM05D002866 ORTHO05D008929 5.5e-37 157.1 79 92.4
vmacro22348 Vaccinium macrocarpon HOM05D002866 ORTHO05D008929 7.2e-37 156.8 80 90.0
Rhsim03G0162900 Rhododendron simsii HOM05D002866 ORTHO05D008929 1.2e-36 156.0 80 90.0
Atru.chr1.858_Atru.chr1.859 Acer truncatum HOM05D002866 ORTHO05D008929 6.1e-36 153.7 80 87.5
CSS0005256 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008929 6.1e-36 153.7 80 87.5
CSS0048324 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008929 6.1e-36 153.7 80 87.5
Thecc.03G150200 Theobroma cacao HOM05D002866 ORTHO05D008929 6.1e-36 153.7 80 88.8
QL05p021044 Quercus lobata HOM05D002866 ORTHO05D008929 7.9e-36 153.3 79 91.1
RcHm_v2.0_Chr1g0373871 Rosa chinensis HOM05D002866 ORTHO05D008929 7.9e-36 153.3 80 87.5
CiPaw.07G051200 Carya illinoinensis HOM05D002866 ORTHO05D008929 1.0e-35 152.9 80 90.0
FvH4_7g27050 Fragaria vesca HOM05D002866 ORTHO05D008929 1.0e-35 152.9 80 87.5
FAN10G2637 Fragaria x ananassa HOM05D002866 ORTHO05D008929 1.0e-35 152.9 80 87.5
Actinidia13601 Actinidia chinensis HOM05D002866 ORTHO05D008929 1.8e-35 152.1 79 88.6
CANSAT56G0775 Cannabis sativa HOM05D002866 ORTHO05D008929 3.0e-35 151.4 79 87.3
Manes.06G132400 Manihot esculenta HOM05D002866 ORTHO05D008929 3.0e-35 151.4 80 87.5
MD07G1250300 Malus domestica HOM05D002866 ORTHO05D008929 5.1e-35 150.6 80 87.5
Prupe.2G273700 Prunus persica HOM05D002866 ORTHO05D008929 5.1e-35 150.6 80 86.2
Haze_22179 Corylus avellana HOM05D002866 ORTHO05D000055 6.7e-35 150.2 80 91.2
Nn6g33860 Nelumbo nucifera HOM05D002866 ORTHO05D008929 6.7e-35 150.2 80 85.0
Sabra14G0144000 Salix brachista HOM05D002866 ORTHO05D008929 6.7e-35 150.2 80 85.0
TAR629G2248 Trochodendron aralioides HOM05D002866 ORTHO05D008929 6.7e-35 150.2 80 87.5
Cpa.g.sc13.272 Carica papaya HOM05D002866 ORTHO05D008929 8.7e-35 149.8 80 87.5
TWI14G1303 Tripterygium wilfordii HOM05D002866 ORTHO05D008929 8.7e-35 149.8 80 85.0
COL.COLO4_14062 Corchorus olitorius HOM05D002866 ORTHO05D008929 1.1e-34 149.4 80 85.0
Potri.014G191900 Populus trichocarpa HOM05D002866 ORTHO05D008929 1.1e-34 149.4 80 86.2
Sed0016729 Sechium edule HOM05D002866 ORTHO05D008929 1.1e-34 149.4 80 85.0
Gohir.A12G197100 Gossypium hirsutum HOM05D002866 ORTHO05D008929 1.5e-34 149.1 80 85.0
Gohir.D12G199700 Gossypium hirsutum HOM05D002866 ORTHO05D008929 1.5e-34 149.1 80 85.0
Gorai.008G214900 Gossypium raimondii HOM05D002866 ORTHO05D008929 1.5e-34 149.1 80 85.0
Phvul.005G009200 Phaseolus vulgaris HOM05D002866 ORTHO05D008929 1.9e-34 148.7 79 86.1
Aqoxy3G02801 Aquilegia oxysepala HOM05D002866 ORTHO05D008929 2.5e-34 148.3 80 85.0
Actinidia24979 Actinidia chinensis HOM05D002866 ORTHO05D008929 3.3e-34 147.9 80 83.8
Oeu021694.1 Olea europaea HOM05D002866 ORTHO05D008929 3.3e-34 147.9 79 83.5
Lj3g0001933 Lotus japonicus HOM05D002866 ORTHO05D008929 4.3e-34 147.5 80 85.0
THA.LOC104818311 Tarenaya hassleriana HOM05D002866 ORTHO05D008929 4.3e-34 147.5 79 83.5
Ciclev10005302m.g Citrus clementina HOM05D002866 ORTHO05D008929 5.7e-34 147.1 80 86.2
Glyma.06G317300 Glycine max HOM05D002866 ORTHO05D008929 7.4e-34 146.7 80 83.8
Peaxi162Scf00271g00827 Petunia axillaris HOM05D002866 ORTHO05D008929 7.4e-34 146.7 80 81.2
TPR.G12157 Trifolium pratense HOM05D002866 ORTHO05D008929 7.4e-34 146.7 80 85.0
unitig_60.g25662 Utricularia gibba HOM05D002866 ORTHO05D008929 7.4e-34 146.7 79 83.5
Lj1A976T81 Lonicera japonica HOM05D002866 ORTHO05D008929 9.7e-34 146.4 77 85.7
Migut.F01192 Erythranthe guttata HOM05D002866 ORTHO05D008929 1.3e-33 146.0 79 81.0
PGR042G0411 Punica granatum HOM05D002866 ORTHO05D008929 1.3e-33 146.0 80 83.8
VMungo1080G1351 Vigna mungo HOM05D002866 ORTHO05D008929 1.6e-33 145.6 80 83.8
MBI04_g34103_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008929 2.8e-33 144.8 80 82.5
Hund11850 Selenicereus undatus HOM05D002866 ORTHO05D008929 2.8e-33 144.8 79 82.3
Ca_14047_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008929 3.7e-33 144.4 80 82.5
FAN03G0702 Fragaria x ananassa HOM05D002866 ORTHO05D008929 3.7e-33 144.4 80 83.8
PSO063G6150 Papaver somniferum HOM05D002866 ORTHO05D008929 3.7e-33 144.4 80 78.8
Duzib084G0424 Durio zibethinus HOM05D002866 ORTHO05D008929 4.8e-33 144.1 80 82.5
Medtr3g008180 Medicago truncatula HOM05D002866 ORTHO05D008929 4.8e-33 144.1 80 83.8
SalBow2G0523 Salvia bowleyana HOM05D002866 ORTHO05D008929 4.8e-33 144.1 79 83.5
ECA238G1321 Erigeron canadensis HOM05D002866 ORTHO05D008929 8.2e-33 143.3 80 78.8
Sopen03g024270 Solanum pennellii HOM05D002866 ORTHO05D008929 8.2e-33 143.3 79 79.7
Lsat_1_v5_gn_2_127761 Lactuca sativa HOM05D002866 ORTHO05D008929 1.1e-32 142.9 80 78.8
Psat5g228760 Pisum sativum HOM05D002866 ORTHO05D008929 1.1e-32 142.9 80 82.5
EL10Ac3g05868 Beta vulgaris HOM05D002866 ORTHO05D008929 1.4e-32 142.5 79 81.0
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 1.4e-32 142.5 80 80.0
BraA03t13840Z Brassica rapa HOM05D002866 ORTHO05D008929 1.4e-32 142.5 80 80.0
Eucgr.A02913 Eucalyptus grandis HOM05D002866 ORTHO05D008929 1.4e-32 142.5 79 81.0
CsaV3_4G004140 Cucumis sativus L. HOM05D002866 ORTHO05D008929 1.8e-32 142.1 80 82.5
Cc02_g04590 Coffea canephora HOM05D002866 ORTHO05D008929 2.4e-32 141.7 80 80.0
PGSC0003DMG400018851 Solanum tuberosum HOM05D002866 ORTHO05D008929 2.4e-32 141.7 79 78.5
AUR62002233 Chenopodium quinoa HOM05D002866 ORTHO05D008929 3.1e-32 141.4 79 79.7
HanXRQChr14g0461261 Helianthus annuus HOM05D002866 ORTHO05D008929 3.1e-32 141.4 80 80.0
AL8G38240 Arabidopsis lyrata HOM05D002866 ORTHO05D008929 4.1e-32 141.0 80 78.8
Nitab4.5_0002346g0020 Nicotiana tabacum HOM05D002866 ORTHO05D008929 4.1e-32 141.0 80 80.0
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 5.3e-32 140.6 80 78.8
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 5.3e-32 140.6 80 78.8
Ah.07g207570 Amaranthus hybridus HOM05D002866 ORTHO05D008929 6.9e-32 140.2 79 78.5
CARHR275310 Cardamine hirsuta HOM05D002866 ORTHO05D008929 9.0e-32 139.8 80 80.0
AUR62015445 Chenopodium quinoa HOM05D002866 ORTHO05D008929 9.0e-32 139.8 79 78.5
Thhalv10004474m.g Eutrema salsugineum HOM05D002866 ORTHO05D008929 1.2e-31 139.4 80 80.0
Sc13g0007920 Simmondsia chinensis HOM05D002866 ORTHO05D008929 1.2e-31 139.4 79 79.7
AT5G61540 Arabidopsis thaliana HOM05D002866 ORTHO05D008929 1.5e-31 139.0 80 78.8
Solyc03g093440.4 Solanum lycopersicum HOM05D002866 ORTHO05D008929 1.5e-31 139.0 77 79.2
Zm00001eb074820 Zea mays HOM05D002866 ORTHO05D008929 2.6e-31 138.3 80 77.5
CAN.G485.17 Capsicum annuum HOM05D002866 ORTHO05D008929 3.4e-31 137.9 79 74.7
FAN06G4646 Fragaria x ananassa HOM05D002866 ORTHO05D008929 3.4e-31 137.9 73 86.3
Os04g0549300 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008929 3.4e-31 137.9 80 81.2
Carub.0008s2223 Capsella rubella HOM05D002866 ORTHO05D008929 4.5e-31 137.5 80 77.5
HPP92_021029 Vanilla planifolia HOM05D002866 ORTHO05D008929 5.9e-31 137.1 80 78.8
HPP92_027439 Vanilla planifolia HOM05D002866 ORTHO05D008929 5.9e-31 137.1 80 80.0
GSVIVG01013994001 Vitis vinifera HOM05D002866 ORTHO05D008929 1.0e-30 136.3 67 95.5
Lalb_Chr15g0079681 Lupinus albus HOM05D002866 ORTHO05D008929 1.3e-30 136.0 80 80.0
Hund11848 Selenicereus undatus HOM05D002866 ORTHO05D008929 1.3e-30 136.0 73 83.6
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 3.8e-30 134.4 73 82.2
Sp2g24740 Schrenkiella parvula HOM05D002866 ORTHO05D008929 5.0e-30 134.0 80 77.5
Dinv06583 Davidia involucrata HOM05D002866 ORTHO05D008929 1.1e-29 132.9 73 82.2
CBR_g51802 Chara braunii HOM05D002866 ORTHO05D000301 2.3e-27 125.2 79 70.9
SGA_v2.0_scaffold56G19920 Striga asiatica HOM05D002866 ORTHO05D008929 2.3e-27 125.2 77 75.3
Mapoly0043s0091 Marchantia polymorpha HOM05D002866 ORTHO05D008929 8.8e-27 123.2 79 70.9
AagrBONN_evm.TU.Sc2ySwM_228.4013 Anthoceros agrestis HOM05D002866 ORTHO05D008929 2.5e-26 121.7 79 72.2
SMO115G0123 Selaginella moellendorffii HOM05D002866 ORTHO05D008929 5.7e-26 120.6 79 72.2
Aa31LG11G1880 Aethionema arabicum HOM05D002866 ORTHO05D008929 9.7e-26 119.8 70 75.7
Pp3c27_3290 Physcomitrium patens HOM05D002866 ORTHO05D008929 1.3e-25 119.4 79 69.6
AL365U10020 Arabidopsis lyrata HOM05D002866 ORTHO05D008929 4.1e-24 114.4 67 74.6
Nitab4.5_0001267g0010 Nicotiana tabacum HOM05D002866 ORTHO05D008929 1.7e-22 109.0 62 75.8
FAN01G2533 Fragaria x ananassa HOM05D002866 ORTHO05D008929 7.2e-21 103.6 53 90.6
arahy.Tifrunner.gnm1.ann1.DW86GH Arachis hypogaea HOM05D002866 ORTHO05D008929 1.2e-15 86.3 51 76.5
PRCOL_00000617 Prasinoderma coloniale HOM05D002866 ORTHO05D008929 4.5e-07 57.8 67 47.8


User provided reference genes

Program Settings