Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 6.5e-284 979.9 459 100.0
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 2.1e-266 921.8 459 92.6
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 5.2e-265 917.1 459 91.3
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 8.8e-265 916.4 460 91.1
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 9.8e-264 912.9 459 91.3
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 1.3e-263 912.5 459 91.5
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 3.7e-263 911.0 459 91.1
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 7.0e-262 906.7 459 91.7
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 7.0e-262 906.7 459 90.4
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 7.7e-261 903.3 459 90.6
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 1.0e-260 902.9 459 90.8
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 2.9e-260 901.4 460 90.2
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.9e-260 901.4 459 90.4
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 3.8e-260 901.0 459 90.2
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 9.5e-259 896.3 460 89.6
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 2.1e-258 895.2 459 89.3
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 2.8e-258 894.8 459 89.8
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 3.6e-258 894.4 475 86.9
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 8.0e-258 893.3 459 89.1
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 1.0e-257 892.9 459 87.6
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 1.0e-257 892.9 459 89.8
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 1.4e-257 892.5 461 89.8
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 1.2e-256 889.4 459 88.0
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.0e-256 888.6 460 89.6
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.0e-256 888.6 460 89.6
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 2.0e-256 888.6 461 89.6
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 5.7e-256 887.1 460 88.9
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 9.8e-256 886.3 460 88.7
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 2.2e-255 885.2 460 88.3
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 8.3e-255 883.2 459 88.7
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 1.1e-254 882.9 460 88.9
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.4e-254 882.5 461 88.7
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 9.2e-254 879.8 481 85.0
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 1.2e-253 879.4 461 88.5
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.0e-253 878.6 461 88.5
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 3.0e-252 874.8 459 87.8
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 3.9e-252 874.4 459 86.1
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 3.9e-252 874.4 461 88.1
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 5.0e-252 874.0 460 87.0
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 6.6e-252 873.6 459 87.6
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 1.1e-251 872.8 459 86.3
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 3.3e-251 871.3 459 87.6
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 2.8e-250 868.2 460 87.2
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 2.3e-249 865.1 460 83.7
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 4.0e-249 864.4 459 84.7
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 6.8e-249 863.6 459 84.5
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 6.8e-249 863.6 459 84.5
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 8.9e-249 863.2 459 86.1
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 1.2e-248 862.8 460 85.7
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 1.5e-248 862.4 459 84.5
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 7.5e-248 860.1 459 86.5
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 2.2e-247 858.6 460 85.2
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 1.1e-246 856.3 460 84.6
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 3.2e-246 854.7 460 85.0
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 1.2e-245 852.8 461 85.0
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 7.8e-245 850.1 461 85.0
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 8.6e-244 846.7 459 83.2
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 2.5e-243 845.1 459 83.0
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 7.3e-243 843.6 459 83.0
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 7.3e-243 843.6 459 83.0
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 8.1e-242 840.1 459 82.8
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 8.1e-242 840.1 459 83.9
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 2.3e-241 838.6 458 83.6
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 7.5e-240 833.6 459 84.3
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 7.5e-240 833.6 455 84.2
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 7.5e-240 833.6 459 82.4
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 9.8e-240 833.2 460 82.8
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 2.9e-239 831.6 462 82.3
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 5.4e-238 827.4 460 82.4
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 2.7e-237 825.1 460 83.5
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 3.5e-237 824.7 443 84.9
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 7.8e-237 823.5 486 77.4
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 1.3e-236 822.8 460 83.5
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 5.1e-236 820.8 459 83.7
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 2.8e-234 815.1 459 82.8
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 4.7e-234 814.3 497 77.5
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 4.9e-231 804.3 458 79.7
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 9.2e-230 800.0 460 82.2
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 2.1e-226 788.9 459 78.2
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 4.4e-224 781.2 458 77.7
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 3.8e-223 778.1 464 76.9
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 4.6e-221 771.2 459 76.9
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 2.8e-210 735.3 498 70.3
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 5.1e-204 714.5 458 75.5
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.1e-203 713.4 459 72.3
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 7.9e-197 690.6 454 69.2
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 2.5e-195 685.6 394 79.2
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.7e-194 681.8 450 67.6
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 7.6e-192 674.1 450 67.3
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 2.3e-188 662.5 340 90.0
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 6.7e-188 661.0 341 90.6
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 6.7e-188 661.0 341 90.6
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 8.7e-188 660.6 338 90.5
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.5e-187 659.8 456 66.4
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.3e-187 658.7 338 90.5
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 4.3e-187 658.3 338 90.5
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 7.7e-184 647.5 338 89.6
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 7.2e-182 641.0 321 92.8
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 1.8e-180 636.3 465 61.9
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 4.1e-177 625.2 337 85.5
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 6.9e-177 624.4 338 86.1
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.0e-172 610.5 337 84.0
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.4e-171 605.1 323 87.3
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 9.1e-169 597.4 450 59.1
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.8e-156 554.7 290 89.0
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 2.0e-155 553.1 337 78.9
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 3.4e-155 552.4 300 85.7
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.7e-151 540.0 291 84.5
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.7e-151 540.0 300 84.7
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 5.4e-145 518.5 277 85.2
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 1.3e-138 497.3 338 66.0
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 1.3e-135 487.3 280 81.1
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 3.9e-111 406.0 449 43.0
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 3.6e-101 372.9 486 39.5
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 2.2e-77 293.9 168 78.6
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.9e-57 227.6 110 93.6
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.9e-57 227.6 110 93.6
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.2e-57 226.5 110 92.7
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 3.3e-54 216.9 163 63.8
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 1.8e-44 184.5 103 83.5
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 1.7e-10 71.6 40 77.5


User provided reference genes

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