Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 9.2e-93 343.6 178 100.0
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 9.3e-45 184.1 171 60.2
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 4.6e-44 181.8 164 62.2
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 6.0e-44 181.4 174 60.3
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 3.0e-43 179.1 164 63.4
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 3.3e-42 175.6 164 60.4
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 5.6e-42 174.9 171 59.6
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 1.3e-41 173.7 171 57.3
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 2.1e-41 172.9 165 61.2
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 2.1e-41 172.9 165 61.2
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 1.1e-40 170.6 168 58.3
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 4.0e-40 168.7 168 57.1
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 2.6e-39 166.0 156 62.2
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 7.6e-39 164.5 168 58.3
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 1.0e-38 164.1 161 58.4
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 1.7e-38 163.3 173 57.8
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 2.5e-37 159.5 171 53.8
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 7.1e-37 157.9 171 55.6
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 9.3e-37 157.5 171 55.0
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 9.3e-37 157.5 171 55.0
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 1.6e-36 156.8 171 52.6
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 4.6e-36 155.2 164 59.1
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 7.9e-36 154.5 171 54.4
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.0e-35 154.1 171 53.2
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 1.0e-35 154.1 143 62.9
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 1.8e-35 153.3 168 54.8
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 5.1e-35 151.8 171 53.2
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 8.7e-35 151.0 171 55.0
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 1.1e-34 150.6 177 54.8
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 1.1e-34 150.6 176 53.4
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 1.5e-34 150.2 166 54.2
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 2.5e-34 149.4 171 52.6
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 2.5e-34 149.4 171 50.3
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 3.3e-34 149.1 143 59.4
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 4.3e-34 148.7 171 53.2
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 4.3e-34 148.7 171 49.7
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 5.7e-34 148.3 175 52.6
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 7.4e-34 147.9 168 53.6
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 1.3e-33 147.1 173 53.2
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 3.7e-33 145.6 167 56.3
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 3.7e-33 145.6 171 49.1
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 8.2e-33 144.4 176 52.8
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 1.1e-32 144.1 172 54.7
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 1.4e-32 143.7 167 54.5
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 4.1e-32 142.1 171 53.8
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 9.0e-32 141.0 171 51.5
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 1.5e-31 140.2 171 50.3
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 2.6e-31 139.4 164 51.2
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 2.6e-31 139.4 171 52.0
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 5.9e-31 138.3 128 64.1
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 5.9e-31 138.3 158 55.1
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 7.6e-31 137.9 158 55.7
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 1.7e-30 136.7 158 57.0
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 2.9e-30 136.0 179 49.7
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 3.8e-30 135.6 85 81.2
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 5.0e-30 135.2 173 53.2
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 6.5e-30 134.8 122 64.8
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 1.4e-29 133.7 100 70.0
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 1.9e-29 133.3 90 77.8
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 3.2e-29 132.5 173 51.4
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 4.2e-29 132.1 151 55.0
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 4.2e-29 132.1 168 51.8
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 5.5e-29 131.7 166 54.2
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 5.5e-29 131.7 164 53.0
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 9.3e-29 131.0 90 76.7
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 9.3e-29 131.0 126 61.1
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 2.1e-28 129.8 176 50.6
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 2.7e-28 129.4 165 52.7
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 2.7e-28 129.4 116 65.5
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 6.1e-28 128.3 79 83.5
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 6.1e-28 128.3 125 61.6
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 7.9e-28 127.9 175 49.1
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 1.8e-27 126.7 164 46.3
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 3.0e-27 125.9 171 48.0
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 3.0e-27 125.9 87 75.9
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 6.7e-27 124.8 152 51.3
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 8.8e-27 124.4 146 52.1
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 1.5e-26 123.6 175 49.1
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 3.3e-26 122.5 162 49.4
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 3.3e-26 122.5 114 64.0
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 7.4e-26 121.3 129 59.7
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 9.7e-26 120.9 179 48.0
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 1.3e-25 120.6 109 61.5
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 1.3e-25 120.6 77 79.2
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 1.3e-25 120.6 161 47.8
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 1.7e-25 120.2 105 62.9
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 2.2e-25 119.8 112 59.8
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 2.2e-25 119.8 112 59.8
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 2.2e-25 119.8 117 57.3
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 2.2e-25 119.8 81 77.8
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 2.2e-25 119.8 81 77.8
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.7e-25 119.0 171 43.3
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 3.7e-25 119.0 167 49.7
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 3.7e-25 119.0 167 49.7
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 3.7e-25 119.0 165 50.9
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 4.8e-25 118.6 90 72.2
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 1.4e-24 117.1 108 58.3
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 1.4e-24 117.1 108 58.3
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 1.4e-24 117.1 108 58.3
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 2.4e-24 116.3 166 48.8
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.4e-24 116.3 166 48.8
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 3.1e-24 115.9 143 46.2
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 6.9e-24 114.8 77 74.0
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 7.7e-23 111.3 117 57.3
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 2.9e-22 109.4 104 55.8
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 8.5e-22 107.8 77 68.8
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 1.2e-20 104.0 125 55.2
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 1.8e-19 100.1 84 64.3
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 1.1e-18 97.4 76 65.8
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 1.5e-18 97.1 58 81.0
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 3.3e-18 95.9 77 63.6
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.5e-15 85.5 113 46.9
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 1.1e-13 80.9 74 55.4
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 4.2e-13 79.0 71 59.2
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.2e-13 79.0 80 56.2
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 5.5e-13 78.6 86 51.2
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 6.1e-12 75.1 82 48.8


User provided reference genes

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