Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013638001 Vitis vinifera HOM05D000318 ORTHO05D440573 5.2e-26 120.2 56 100.0
Dinv38973 Davidia involucrata HOM05D000318 ORTHO05D009141 6.8e-10 66.6 33 87.9
VMungo0251G0790 Vigna mungo HOM05D000032 ORTHO05D002227 6.8e-10 66.6 43 69.8
GSVIVG01019805001 Vitis vinifera HOM05D000318 ORTHO05D009141 6.8e-10 66.6 33 87.9
arahy.Tifrunner.gnm1.ann1.2A0H1U Arachis hypogaea HOM05D000318 ORTHO05D009141 2.0e-09 65.1 33 87.9
vmacro11304 Vaccinium macrocarpon HOM05D000318 ORTHO05D009141 3.4e-09 64.3 33 84.8
MELO3C005652.2 Cucumis melo HOM05D000318 ORTHO05D009141 4.4e-09 63.9 33 84.8
CsaV3_5G003020 Cucumis sativus L. HOM05D005566 ORTHO05D007534 4.4e-09 63.9 33 84.8
PSO063G4890 Papaver somniferum HOM05D000318 ORTHO05D009141 4.4e-09 63.9 33 84.8
PSO782G3853 Papaver somniferum HOM05D000318 ORTHO05D009141 4.4e-09 63.9 33 84.8
EL10Ac5g12768 Beta vulgaris HOM05D000318 ORTHO05D009141 5.8e-09 63.5 33 84.8
CSS0008231 Camellia sinensis var. sinensis HOM05D000318 ORTHO05D009141 5.8e-09 63.5 33 84.8
Migut.E01113 Erythranthe guttata HOM05D000318 ORTHO05D009141 5.8e-09 63.5 33 84.8
SalBow1G5358 Salvia bowleyana HOM05D000318 ORTHO05D009141 5.8e-09 63.5 31 87.1
Hund11491 Selenicereus undatus HOM05D000318 ORTHO05D009141 5.8e-09 63.5 31 90.3
TWI15G0460 Tripterygium wilfordii HOM05D000318 ORTHO05D009141 5.8e-09 63.5 33 81.8
Nn1g01430 Nelumbo nucifera HOM05D000318 ORTHO05D009141 7.5e-09 63.2 33 81.8
Rhsim02G0223600 Rhododendron simsii HOM05D005566 ORTHO05D007534 7.5e-09 63.2 31 87.1
Ca_17551_v3 Cicer arietinum L. HOM05D000318 ORTHO05D009141 9.8e-09 62.8 33 84.8
Medtr8g097280 Medicago truncatula HOM05D000318 ORTHO05D009141 9.8e-09 62.8 33 84.8
Nitab4.5_0001356g0040 Nicotiana tabacum HOM05D000318 ORTHO05D009141 9.8e-09 62.8 33 84.8
Nitab4.5_0008905g0050 Nicotiana tabacum HOM05D000318 ORTHO05D009141 9.8e-09 62.8 33 84.8
Peaxi162Scf00714g00122 Petunia axillaris HOM05D000318 ORTHO05D009141 9.8e-09 62.8 33 84.8
Phvul.002G287500 Phaseolus vulgaris HOM05D000318 ORTHO05D009141 9.8e-09 62.8 33 84.8
Potri.001G107200 Populus trichocarpa HOM05D000318 ORTHO05D009141 9.8e-09 62.8 33 81.8
Sabra01G0081200 Salix brachista HOM05D000318 ORTHO05D009141 9.8e-09 62.8 33 81.8
TPR.G12836 Trifolium pratense HOM05D000318 ORTHO05D009141 9.8e-09 62.8 33 84.8
Eucgr.E00568 Eucalyptus grandis HOM05D000318 ORTHO05D009141 1.3e-08 62.4 33 81.8
Lj8A233G54 Lonicera japonica HOM05D000318 ORTHO05D009141 1.3e-08 62.4 33 81.8
Aqoxy5G04020 Aquilegia oxysepala HOM05D000318 ORTHO05D009141 1.7e-08 62.0 33 81.8
MSTRG.1881 Avicennia marina HOM05D000318 ORTHO05D009141 1.7e-08 62.0 33 81.8
Nn6g33533 Nelumbo nucifera HOM05D000318 ORTHO05D009141 1.7e-08 62.0 33 81.8
arahy.Tifrunner.gnm1.ann1.8RU08H Arachis hypogaea HOM05D005566 ORTHO05D007534 2.2e-08 61.6 33 81.8
arahy.Tifrunner.gnm1.ann1.H32RIC Arachis hypogaea HOM05D005566 ORTHO05D007534 2.2e-08 61.6 33 81.8
AUR62010606 Chenopodium quinoa HOM05D000318 ORTHO05D009141 2.2e-08 61.6 31 87.1
Haze_08894 Corylus avellana HOM05D000318 ORTHO05D009141 2.2e-08 61.6 33 81.8
SGA_v2.0_scaffold144G35960 Striga asiatica HOM05D000250 ORTHO05D002850 2.2e-08 61.6 32 84.4
Actinidia02023 Actinidia chinensis HOM05D000318 ORTHO05D009141 2.9e-08 61.2 33 78.8
Ciclev10021645m.g Citrus clementina HOM05D000318 ORTHO05D009141 2.9e-08 61.2 32 81.2
Glyma.05G205600 Glycine max HOM05D000318 ORTHO05D009141 2.9e-08 61.2 33 81.8
TPR.G27200 Trifolium pratense HOM05D000318 ORTHO05D009141 2.9e-08 61.2 33 81.8
TAR629G0468 Trochodendron aralioides HOM05D000318 ORTHO05D009141 2.9e-08 61.2 33 78.8
Actinidia14545 Actinidia chinensis HOM05D000318 ORTHO05D009141 3.7e-08 60.8 33 78.8
CiPaw.12G095400 Carya illinoinensis HOM05D000318 ORTHO05D009141 3.7e-08 60.8 33 78.8
ECA246G3976 Erigeron canadensis HOM05D000318 ORTHO05D009141 3.7e-08 60.8 31 83.9
FAN08G2943 Fragaria x ananassa HOM05D005566 ORTHO05D007534 3.7e-08 60.8 33 81.8
FAN13G1151 Fragaria x ananassa HOM05D005566 ORTHO05D007534 3.7e-08 60.8 33 81.8
Psat7g034960 Pisum sativum HOM05D000318 ORTHO05D009141 3.7e-08 60.8 33 81.8
RcHm_v2.0_Chr7g0198441 Rosa chinensis HOM05D000318 ORTHO05D009141 3.7e-08 60.8 33 81.8
COL.COLO4_34426 Corchorus olitorius HOM05D005566 ORTHO05D007534 4.9e-08 60.5 31 80.6
Duzib205G0400 Durio zibethinus HOM05D000318 ORTHO05D009141 4.9e-08 60.5 30 83.3
Gohir.A08G180000 Gossypium hirsutum HOM05D000318 ORTHO05D009141 4.9e-08 60.5 30 83.3
Gohir.D08G198800 Gossypium hirsutum HOM05D000318 ORTHO05D009141 4.9e-08 60.5 30 83.3
Gorai.004G209600 Gossypium raimondii HOM05D000318 ORTHO05D009141 4.9e-08 60.5 30 83.3
Thecc.03G275200 Theobroma cacao HOM05D000318 ORTHO05D009141 4.9e-08 60.5 30 83.3
Prupe.5G095600 Prunus persica HOM05D000318 ORTHO05D009141 6.4e-08 60.1 33 78.8
HanXRQChr17g0533341 Helianthus annuus HOM05D000318 ORTHO05D009141 8.3e-08 59.7 33 78.8
MD06G1077800 Malus domestica HOM05D000318 ORTHO05D009141 8.3e-08 59.7 33 78.8
PGR031G2759 Punica granatum HOM05D000318 ORTHO05D009141 8.3e-08 59.7 33 78.8
Sed0021933 Sechium edule HOM05D000318 ORTHO05D009141 8.3e-08 59.7 32 81.2
CANSAT21G2466 Cannabis sativa HOM05D000318 ORTHO05D009141 1.1e-07 59.3 32 81.2
CAN.G859.11 Capsicum annuum HOM05D000318 ORTHO05D009141 1.9e-07 58.5 33 78.8
Duzib084G0779 Durio zibethinus HOM05D000318 ORTHO05D009141 1.9e-07 58.5 30 80.0
Lj4g0013226 Lotus japonicus HOM05D000318 ORTHO05D009141 2.4e-07 58.2 30 83.3
Sc22g0000220 Simmondsia chinensis HOM05D000318 ORTHO05D009141 2.4e-07 58.2 31 80.6
PGSC0003DMG400003061 Solanum tuberosum HOM05D000318 ORTHO05D009141 2.4e-07 58.2 33 78.8
Cpa.g.sc98.26 Carica papaya HOM05D000318 ORTHO05D009141 3.2e-07 57.8 30 83.3
DCAR_004650 Daucus carota HOM05D000318 ORTHO05D009141 3.2e-07 57.8 33 72.7
FvH4_5g01944 Fragaria vesca HOM05D000318 ORTHO05D009141 3.2e-07 57.8 33 75.8
FAN18G1004 Fragaria x ananassa HOM05D005566 ORTHO05D007534 3.2e-07 57.8 33 75.8
Manes.02G024300 Manihot esculenta HOM05D000318 ORTHO05D009141 3.2e-07 57.8 33 75.8
Aa31LG2G710 Aethionema arabicum HOM05D000318 ORTHO05D007251 4.1e-07 57.4 33 75.8
Lsat_1_v5_gn_6_87160 Lactuca sativa HOM05D000318 ORTHO05D009141 4.1e-07 57.4 31 71.0
MBI17_g08174_MAGBIO Magnolia biondii HOM05D000318 ORTHO05D009141 4.1e-07 57.4 33 72.7
HPP92_004976 Vanilla planifolia HOM05D000318 ORTHO05D009141 4.1e-07 57.4 31 77.4
Carub.0002s0156 Capsella rubella HOM05D000318 ORTHO05D009141 5.4e-07 57.0 33 75.8
CARHR048150 Cardamine hirsuta HOM05D000318 ORTHO05D009141 5.4e-07 57.0 33 75.8
Cc08_g14340 Coffea canephora HOM05D000318 ORTHO05D009141 5.4e-07 57.0 31 80.6
AL2G11880 Arabidopsis lyrata HOM05D000318 ORTHO05D007251 7.0e-07 56.6 33 75.8
AL2G11970 Arabidopsis lyrata HOM05D000318 ORTHO05D007251 7.0e-07 56.6 33 75.8
AL2G12010 Arabidopsis lyrata HOM05D000318 ORTHO05D009141 7.0e-07 56.6 33 75.8
AT1G63260 Arabidopsis thaliana HOM05D000318 ORTHO05D009141 7.0e-07 56.6 33 75.8
BcaC04g22708 Brassica carinata HOM05D000318 ORTHO05D009141 7.0e-07 56.6 33 75.8
A09p13550 Brassica napus HOM05D000318 ORTHO05D009141 7.0e-07 56.6 33 75.8
C09p16060 Brassica napus HOM05D000318 ORTHO05D009141 7.0e-07 56.6 33 75.8
BolC9t54523H Brassica oleracea HOM05D000318 ORTHO05D009141 7.0e-07 56.6 33 75.8
BraA09t37006Z Brassica rapa HOM05D000318 ORTHO05D009141 7.0e-07 56.6 33 75.8
Thhalv10023642m.g Eutrema salsugineum HOM05D000318 ORTHO05D009141 7.0e-07 56.6 33 72.7
Os10g0503600 Oryza sativa ssp. japonica HOM05D000318 ORTHO05D009141 7.0e-07 56.6 33 66.7
Sp2g01260 Schrenkiella parvula HOM05D000318 ORTHO05D009141 7.0e-07 56.6 33 75.8
ECA240G2842 Erigeron canadensis HOM05D000318 ORTHO05D009141 9.2e-07 56.2 33 69.7
Glyma.08G012500 Glycine max HOM05D000318 ORTHO05D009141 9.2e-07 56.2 33 78.8
Solyc08g080730.3 Solanum lycopersicum HOM05D000318 ORTHO05D009141 9.2e-07 56.2 33 75.8
Sopen08g029040 Solanum pennellii HOM05D000318 ORTHO05D009141 9.2e-07 56.2 33 75.8
Zm00001eb044140 Zea mays HOM05D000318 ORTHO05D009141 1.2e-06 55.8 33 69.7
Lalb_Chr05g0224931 Lupinus albus HOM05D000318 ORTHO05D009141 2.1e-06 55.1 31 74.2
BcaC06g31942 Brassica carinata HOM05D000318 ORTHO05D009141 3.5e-06 54.3 33 72.7
Atru.chr13.1694 Acer truncatum HOM05D000318 ORTHO05D009141 6.0e-06 53.5 28 78.6


User provided reference genes

Program Settings