Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013637001 Vitis vinifera HOM05D000318 ORTHO05D009141 4.2e-29 130.6 61 100.0
GSVIVG01019805001 Vitis vinifera HOM05D000318 ORTHO05D009141 5.9e-23 110.2 60 86.7
DCAR_004650 Daucus carota HOM05D000318 ORTHO05D009141 1.7e-22 108.6 60 81.7
MBI17_g08174_MAGBIO Magnolia biondii HOM05D000318 ORTHO05D009141 1.7e-22 108.6 60 83.3
Atru.chr13.1694 Acer truncatum HOM05D000318 ORTHO05D009141 6.5e-22 106.7 60 83.3
Actinidia14545 Actinidia chinensis HOM05D000318 ORTHO05D009141 6.5e-22 106.7 60 80.0
Nn6g33533 Nelumbo nucifera HOM05D000318 ORTHO05D009141 6.5e-22 106.7 60 81.7
CSS0012007 Camellia sinensis var. sinensis HOM05D000318 ORTHO05D009141 8.5e-22 106.3 60 81.7
Rhsim02G0223600 Rhododendron simsii HOM05D005566 ORTHO05D007534 1.4e-21 105.5 60 78.3
Haze_08894 Corylus avellana HOM05D000318 ORTHO05D009141 1.9e-21 105.1 60 80.0
PGR031G2759 Punica granatum HOM05D000318 ORTHO05D009141 1.9e-21 105.1 60 80.0
QL12p018081 Quercus lobata HOM05D000318 ORTHO05D009141 1.9e-21 105.1 60 80.0
CANSAT21G2466 Cannabis sativa HOM05D000318 ORTHO05D009141 2.5e-21 104.8 60 80.0
FAN08G2943 Fragaria x ananassa HOM05D005566 ORTHO05D007534 2.5e-21 104.8 60 78.3
Nn1g01430 Nelumbo nucifera HOM05D000318 ORTHO05D009141 2.5e-21 104.8 60 80.0
Actinidia02023 Actinidia chinensis HOM05D000318 ORTHO05D009141 3.2e-21 104.4 60 78.3
FvH4_5g01944 Fragaria vesca HOM05D000318 ORTHO05D009141 3.2e-21 104.4 60 76.7
FAN18G1004 Fragaria x ananassa HOM05D005566 ORTHO05D007534 3.2e-21 104.4 60 76.7
CiPaw.12G095400 Carya illinoinensis HOM05D000318 ORTHO05D009141 4.2e-21 104.0 60 80.0
Gohir.A08G180000 Gossypium hirsutum HOM05D000318 ORTHO05D009141 4.2e-21 104.0 60 78.3
Gohir.D08G198800 Gossypium hirsutum HOM05D000318 ORTHO05D009141 4.2e-21 104.0 60 78.3
Manes.02G024300 Manihot esculenta HOM05D000318 ORTHO05D009141 5.5e-21 103.6 60 80.0
RcHm_v2.0_Chr7g0198441 Rosa chinensis HOM05D000318 ORTHO05D009141 5.5e-21 103.6 57 80.7
ClCG01G002940 Citrullus lanatus HOM05D005566 ORTHO05D007534 7.2e-21 103.2 60 76.7
MELO3C005652.2 Cucumis melo HOM05D000318 ORTHO05D009141 7.2e-21 103.2 60 76.7
CsaV3_5G003020 Cucumis sativus L. HOM05D005566 ORTHO05D007534 7.2e-21 103.2 60 76.7
Eucgr.E00568 Eucalyptus grandis HOM05D000318 ORTHO05D009141 7.2e-21 103.2 60 78.3
Gorai.004G209600 Gossypium raimondii HOM05D000318 ORTHO05D009141 7.2e-21 103.2 60 76.7
Lj8A233G54 Lonicera japonica HOM05D000318 ORTHO05D009141 7.2e-21 103.2 60 78.3
FAN13G1151 Fragaria x ananassa HOM05D005566 ORTHO05D007534 9.3e-21 102.8 60 76.7
Lj4g0013226 Lotus japonicus HOM05D000318 ORTHO05D009141 9.3e-21 102.8 60 76.7
Cc08_g14340 Coffea canephora HOM05D000318 ORTHO05D009141 1.6e-20 102.1 60 76.7
COL.COLO4_34426 Corchorus olitorius HOM05D005566 ORTHO05D007534 1.6e-20 102.1 60 76.7
MD06G1077800 Malus domestica HOM05D000318 ORTHO05D009141 1.6e-20 102.1 60 75.0
TPR.G12836 Trifolium pratense HOM05D000318 ORTHO05D009141 1.6e-20 102.1 60 76.7
Ciclev10021645m.g Citrus clementina HOM05D000318 ORTHO05D009141 2.1e-20 101.7 60 80.0
Medtr8g097280 Medicago truncatula HOM05D000318 ORTHO05D009141 2.1e-20 101.7 60 76.7
Duzib084G0779 Durio zibethinus HOM05D000318 ORTHO05D009141 2.7e-20 101.3 60 76.7
Phvul.002G287500 Phaseolus vulgaris HOM05D000318 ORTHO05D009141 2.7e-20 101.3 60 76.7
TWI15G0460 Tripterygium wilfordii HOM05D000318 ORTHO05D009141 2.7e-20 101.3 60 76.7
SalBow1G5358 Salvia bowleyana HOM05D000318 ORTHO05D009141 3.6e-20 100.9 60 78.3
Thecc.03G275200 Theobroma cacao HOM05D000318 ORTHO05D009141 3.6e-20 100.9 60 76.7
Sed0021933 Sechium edule HOM05D000318 ORTHO05D009141 4.6e-20 100.5 60 75.0
Nitab4.5_0008905g0050 Nicotiana tabacum HOM05D000318 ORTHO05D009141 6.1e-20 100.1 60 75.0
Psat7g034960 Pisum sativum HOM05D000318 ORTHO05D009141 6.1e-20 100.1 60 75.0
CSS0008231 Camellia sinensis var. sinensis HOM05D000318 ORTHO05D009141 7.9e-20 99.8 60 75.0
Glyma.08G012500 Glycine max HOM05D000318 ORTHO05D009141 7.9e-20 99.8 60 75.0
Sc22g0000220 Simmondsia chinensis HOM05D000318 ORTHO05D009141 7.9e-20 99.8 60 75.0
VMungo0251G0790 Vigna mungo HOM05D000032 ORTHO05D002227 7.9e-20 99.8 60 75.0
TAR629G0468 Trochodendron aralioides HOM05D000318 ORTHO05D009141 1.0e-19 99.4 60 73.3
Sabra01G0081200 Salix brachista HOM05D000318 ORTHO05D009141 1.3e-19 99.0 60 76.7
Hund11491 Selenicereus undatus HOM05D000318 ORTHO05D009141 1.3e-19 99.0 60 76.7
Ah.12g057310 Amaranthus hybridus HOM05D000318 ORTHO05D009141 1.8e-19 98.6 60 76.7
MSTRG.1881 Avicennia marina HOM05D000318 ORTHO05D009141 1.8e-19 98.6 60 73.3
PGSC0003DMG400003061 Solanum tuberosum HOM05D000318 ORTHO05D009141 2.3e-19 98.2 60 73.3
Lsat_1_v5_gn_6_87160 Lactuca sativa HOM05D000318 ORTHO05D009141 3.0e-19 97.8 60 73.3
Solyc08g080730.3 Solanum lycopersicum HOM05D000318 ORTHO05D009141 3.0e-19 97.8 60 71.7
HanXRQChr03g0086561 Helianthus annuus HOM05D000318 ORTHO05D009141 3.9e-19 97.4 60 75.0
Potri.001G107200 Populus trichocarpa HOM05D000318 ORTHO05D009141 5.1e-19 97.1 60 75.0
CAN.G859.11 Capsicum annuum HOM05D000318 ORTHO05D009141 8.7e-19 96.3 60 73.3
HanXRQChr17g0533341 Helianthus annuus HOM05D000318 ORTHO05D009141 8.7e-19 96.3 60 71.7
Glyma.05G205600 Glycine max HOM05D000318 ORTHO05D009141 1.1e-18 95.9 60 71.7
Sopen08g029040 Solanum pennellii HOM05D000318 ORTHO05D009141 1.1e-18 95.9 60 71.7
arahy.Tifrunner.gnm1.ann1.2A0H1U Arachis hypogaea HOM05D000318 ORTHO05D009141 1.5e-18 95.5 60 76.7
ECA246G3976 Erigeron canadensis HOM05D000318 ORTHO05D009141 1.9e-18 95.1 60 70.0
Aqoxy5G04020 Aquilegia oxysepala HOM05D000318 ORTHO05D009141 2.5e-18 94.7 60 68.3
arahy.Tifrunner.gnm1.ann1.H32RIC Arachis hypogaea HOM05D005566 ORTHO05D007534 2.5e-18 94.7 60 66.7
Peaxi162Scf00714g00122 Petunia axillaris HOM05D000318 ORTHO05D009141 2.5e-18 94.7 60 70.0
AUR62017247 Chenopodium quinoa HOM05D000318 ORTHO05D009141 3.3e-18 94.4 60 73.3
ECA240G2842 Erigeron canadensis HOM05D000318 ORTHO05D009141 3.3e-18 94.4 56 73.2
Migut.E01113 Erythranthe guttata HOM05D000318 ORTHO05D009141 3.3e-18 94.4 60 66.7
Aa31LG2G710 Aethionema arabicum HOM05D000318 ORTHO05D007251 4.3e-18 94.0 60 73.3
EL10Ac5g12768 Beta vulgaris HOM05D000318 ORTHO05D009141 4.3e-18 94.0 60 71.7
AUR62010606 Chenopodium quinoa HOM05D000318 ORTHO05D009141 4.3e-18 94.0 60 73.3
Lalb_Chr05g0224931 Lupinus albus HOM05D000318 ORTHO05D009141 4.3e-18 94.0 60 70.0
Medtr8g097250 Medicago truncatula HOM05D000318 ORTHO05D009141 4.3e-18 94.0 60 68.3
AL2G11880 Arabidopsis lyrata HOM05D000318 ORTHO05D007251 1.3e-17 92.4 60 73.3
AL2G11970 Arabidopsis lyrata HOM05D000318 ORTHO05D007251 1.3e-17 92.4 60 73.3
AL2G12010 Arabidopsis lyrata HOM05D000318 ORTHO05D009141 1.3e-17 92.4 60 73.3
AT1G63260 Arabidopsis thaliana HOM05D000318 ORTHO05D009141 1.3e-17 92.4 60 73.3
Thhalv10023642m.g Eutrema salsugineum HOM05D000318 ORTHO05D009141 1.3e-17 92.4 60 73.3
Carub.0002s0156 Capsella rubella HOM05D000318 ORTHO05D009141 1.6e-17 92.0 60 71.7
Ca_17551_v3 Cicer arietinum L. HOM05D000318 ORTHO05D009141 2.2e-17 91.7 60 70.0
SEGI_21294 Sequoiadendron giganteum HOM05D000318 ORTHO05D009141 2.2e-17 91.7 60 71.7
CARHR048150 Cardamine hirsuta HOM05D000318 ORTHO05D009141 2.8e-17 91.3 60 71.7
BcaC04g22708 Brassica carinata HOM05D000318 ORTHO05D009141 3.7e-17 90.9 60 71.7
A09p13550 Brassica napus HOM05D000318 ORTHO05D009141 3.7e-17 90.9 60 71.7
C09p16060 Brassica napus HOM05D000318 ORTHO05D009141 3.7e-17 90.9 60 71.7
BolC9t54523H Brassica oleracea HOM05D000318 ORTHO05D009141 3.7e-17 90.9 60 71.7
BraA09t37006Z Brassica rapa HOM05D000318 ORTHO05D009141 3.7e-17 90.9 60 71.7
Os10g0503600 Oryza sativa ssp. japonica HOM05D000318 ORTHO05D009141 3.7e-17 90.9 60 63.3
vmacro11304 Vaccinium macrocarpon HOM05D000318 ORTHO05D009141 3.7e-17 90.9 86 54.7
Cpa.g.sc98.26 Carica papaya HOM05D000318 ORTHO05D009141 6.3e-17 90.1 76 60.5
Duzib205G0400 Durio zibethinus HOM05D000318 ORTHO05D009141 6.3e-17 90.1 84 56.0
BcaC06g31942 Brassica carinata HOM05D000318 ORTHO05D009141 8.2e-17 89.7 60 70.0
PSO063G4890 Papaver somniferum HOM05D000318 ORTHO05D009141 8.2e-17 89.7 57 71.9
PSO143G0001 Papaver somniferum HOM05D000318 ORTHO05D009141 8.2e-17 89.7 57 71.9
Sp2g01260 Schrenkiella parvula HOM05D000318 ORTHO05D009141 8.2e-17 89.7 60 70.0
PSO782G3853 Papaver somniferum HOM05D000318 ORTHO05D009141 1.8e-16 88.6 57 71.9
HPP92_004976 Vanilla planifolia HOM05D000318 ORTHO05D009141 1.8e-16 88.6 60 65.0
Zm00001eb044140 Zea mays HOM05D000318 ORTHO05D009141 7.7e-15 83.2 60 55.0
Nitab4.5_0001356g0040 Nicotiana tabacum HOM05D000318 ORTHO05D009141 2.9e-14 81.3 47 78.7
HanXRQChr14g0455261 Helianthus annuus HOM05D000318 ORTHO05D009141 2.1e-12 75.1 62 59.7
arahy.Tifrunner.gnm1.ann1.8RU08H Arachis hypogaea HOM05D005566 ORTHO05D007534 3.6e-12 74.3 50 60.0
HanXRQChr02g0058991 Helianthus annuus HOM05D000318 ORTHO05D009141 3.0e-11 71.2 75 49.3
Dinv38973 Davidia involucrata HOM05D000318 ORTHO05D009141 2.2e-09 65.1 37 75.7
Prupe.5G095600 Prunus persica HOM05D000318 ORTHO05D009141 6.3e-09 63.5 37 75.7
SMO118G0270 Selaginella moellendorffii HOM05D000318 ORTHO05D009141 1.4e-08 62.4 55 49.1
AagrBONN_evm.TU.Sc2ySwM_228.5548 Anthoceros agrestis HOM05D000318 ORTHO05D009141 1.7e-06 55.5 55 45.5
CSS0026407 Camellia sinensis var. sinensis HOM05D000318 ORTHO05D009141 2.9e-06 54.7 72 45.8


User provided reference genes

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