Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013576001 Vitis vinifera HOM05D005970 ORTHO05D007146 2.3e-77 292.0 131 100.0
GSVIVG01013548001 Vitis vinifera HOM05D005970 ORTHO05D007146 1.9e-26 122.9 59 86.4
Aqoxy2G04048 Aquilegia oxysepala HOM05D005970 ORTHO05D007146 1.8e-24 116.3 59 76.3
Sed0012260 Sechium edule HOM05D005970 ORTHO05D007146 1.8e-24 116.3 59 76.3
Lj3A262T16 Lonicera japonica HOM05D005970 ORTHO05D007146 3.9e-24 115.2 62 72.6
CiPaw.01G106400 Carya illinoinensis HOM05D005970 ORTHO05D007146 5.1e-24 114.8 59 74.6
ClCG08G003970 Citrullus lanatus HOM05D005970 ORTHO05D007146 5.1e-24 114.8 59 76.3
MELO3C011504.2 Cucumis melo HOM05D005970 ORTHO05D007146 5.1e-24 114.8 59 76.3
CsaV3_6G003170 Cucumis sativus L. HOM05D005970 ORTHO05D007146 5.1e-24 114.8 59 76.3
Phvul.007G002300 Phaseolus vulgaris HOM05D005970 ORTHO05D007146 5.1e-24 114.8 59 76.3
Dinv22666 Davidia involucrata HOM05D005970 ORTHO05D007146 8.7e-24 114.0 59 76.3
MD04G1032500 Malus domestica HOM05D005970 ORTHO05D007146 8.7e-24 114.0 59 79.7
MBI08_g17320_MAGBIO Magnolia biondii HOM05D005970 ORTHO05D007146 1.1e-23 113.6 59 74.6
RcHm_v2.0_Chr4g0408981 Rosa chinensis HOM05D005970 ORTHO05D007146 1.1e-23 113.6 59 78.0
ATR0618G312 Amborella trichopoda HOM05D005970 ORTHO05D007146 1.5e-23 113.2 59 76.3
Haze_11055 Corylus avellana HOM05D005970 ORTHO05D007146 1.5e-23 113.2 59 74.6
VMungo0720G0532 Vigna mungo HOM05D005970 ORTHO05D007146 1.9e-23 112.8 59 76.3
HPP92_001247 Vanilla planifolia HOM05D005970 ORTHO05D007146 2.5e-23 112.5 59 74.6
HPP92_001263 Vanilla planifolia HOM05D005970 ORTHO05D007146 2.5e-23 112.5 59 74.6
Cpa.g.sc164.4 Carica papaya HOM05D005970 ORTHO05D007146 3.3e-23 112.1 59 78.0
Lj5g0014069 Lotus japonicus HOM05D005970 ORTHO05D007146 3.3e-23 112.1 59 74.6
QL10p046561 Quercus lobata HOM05D005970 ORTHO05D007146 3.3e-23 112.1 59 74.6
Thecc.04G181600 Theobroma cacao HOM05D005970 ORTHO05D007146 3.3e-23 112.1 59 76.3
arahy.Tifrunner.gnm1.ann1.ILR90A Arachis hypogaea HOM05D005970 ORTHO05D007146 4.3e-23 111.7 59 74.6
arahy.Tifrunner.gnm1.ann1.R0ZLJW Arachis hypogaea HOM05D005970 ORTHO05D007146 4.3e-23 111.7 59 74.6
Glyma.20G248000 Glycine max HOM05D005970 ORTHO05D007146 4.3e-23 111.7 59 74.6
Duzib151G0884 Durio zibethinus HOM05D005970 ORTHO05D007146 5.6e-23 111.3 59 74.6
CSS0014236 Camellia sinensis var. sinensis HOM05D005970 ORTHO05D007146 7.4e-23 110.9 59 76.3
CANSAT80G1971 Cannabis sativa HOM05D005970 ORTHO05D007146 7.4e-23 110.9 59 72.9
TPR.G8892 Trifolium pratense HOM05D005970 ORTHO05D007146 7.4e-23 110.9 59 71.2
COL.COLO4_24350 Corchorus olitorius HOM05D005970 ORTHO05D007146 9.6e-23 110.5 59 74.6
Ca_11416_v3 Cicer arietinum L. HOM05D005970 ORTHO05D007146 1.3e-22 110.2 59 72.9
FvH4_4g11690 Fragaria vesca HOM05D005970 ORTHO05D007146 1.3e-22 110.2 59 79.7
FAN07G1016 Fragaria x ananassa HOM05D005970 ORTHO05D007146 1.3e-22 110.2 59 79.7
FAN12G0387 Fragaria x ananassa HOM05D005970 ORTHO05D007146 1.3e-22 110.2 59 79.7
FAN12G1273 Fragaria x ananassa HOM05D005970 ORTHO05D007146 1.3e-22 110.2 59 79.7
Lalb_Chr06g0164591 Lupinus albus HOM05D005970 ORTHO05D007146 1.3e-22 110.2 59 72.9
Prupe.1G181900 Prunus persica HOM05D005970 ORTHO05D007146 1.3e-22 110.2 59 76.3
Sc22g0002260 Simmondsia chinensis HOM05D005970 ORTHO05D007146 1.6e-22 109.8 59 74.6
vmacro00562 Vaccinium macrocarpon HOM05D005970 ORTHO05D007146 1.6e-22 109.8 59 72.9
Ciclev10023314m.g Citrus clementina HOM05D005970 ORTHO05D007146 2.8e-22 109.0 59 74.6
Atru.chr3.1658_Atru.chr3.1659 Acer truncatum HOM05D005970 ORTHO05D007146 3.7e-22 108.6 59 72.9
Medtr1g116780 Medicago truncatula HOM05D005970 ORTHO05D007146 3.7e-22 108.6 59 69.5
Ah.12g062330 Amaranthus hybridus HOM05D005970 ORTHO05D007146 4.8e-22 108.2 59 71.2
TAR362G0058 Trochodendron aralioides HOM05D005970 ORTHO05D007146 6.2e-22 107.8 59 74.6
Zm00001eb425400 Zea mays HOM05D005970 ORTHO05D007146 1.1e-21 107.1 59 69.5
Actinidia32934 Actinidia chinensis HOM05D005970 ORTHO05D007146 1.4e-21 106.7 59 72.9
Rhsim09G0037500 Rhododendron simsii HOM05D005970 ORTHO05D007146 1.4e-21 106.7 59 71.2
PGR083G2204 Punica granatum HOM05D005970 ORTHO05D007146 1.8e-21 106.3 59 71.2
Eucgr.A00211 Eucalyptus grandis HOM05D005970 ORTHO05D007146 3.1e-21 105.5 59 71.2
CAN.G710.55 Capsicum annuum HOM05D005970 ORTHO05D007146 2.0e-20 102.8 59 69.5
Nitab4.5_0001049g0010 Nicotiana tabacum HOM05D005970 ORTHO05D007146 2.0e-20 102.8 59 69.5
Nitab4.5_0002313g0060 Nicotiana tabacum HOM05D005970 ORTHO05D007146 2.0e-20 102.8 59 69.5
Peaxi162Scf00286g00235 Petunia axillaris HOM05D005970 ORTHO05D007146 2.0e-20 102.8 59 69.5
Solyc09g098450.4 Solanum lycopersicum HOM05D005970 ORTHO05D007146 2.0e-20 102.8 59 69.5
Sopen09g036380 Solanum pennellii HOM05D005970 ORTHO05D007146 2.0e-20 102.8 59 69.5
Potri.014G150800 Populus trichocarpa HOM05D005970 ORTHO05D007146 2.6e-20 102.4 59 67.8
Hma1.2p1_1477F.1_g285890 Hydrangea macrophylla HOM05D005970 ORTHO05D007146 3.4e-20 102.1 59 67.8
Mapoly0123s0015 Marchantia polymorpha HOM05D005970 ORTHO05D007146 3.4e-20 102.1 59 64.4
Psat6g242520 Pisum sativum HOM05D005970 ORTHO05D007146 3.4e-20 102.1 61 62.3
Os04g0489100 Oryza sativa ssp. japonica HOM05D005970 ORTHO05D007146 1.0e-19 100.5 54 70.4
Gohir.A02G013401 Gossypium hirsutum HOM05D005970 ORTHO05D007146 2.2e-19 99.4 59 64.4
ECA234G4469 Erigeron canadensis HOM05D005970 ORTHO05D007146 4.9e-19 98.2 59 64.4
Gohir.D02G014300 Gossypium hirsutum HOM05D005970 ORTHO05D007146 4.9e-19 98.2 59 62.7
Gorai.005G017800 Gossypium raimondii HOM05D005970 ORTHO05D007146 4.9e-19 98.2 59 62.7
HPP92_002722 Vanilla planifolia HOM05D005970 ORTHO05D007146 6.5e-19 97.8 59 66.1
HanXRQChr17g0557031 Helianthus annuus HOM05D005970 ORTHO05D007146 8.4e-19 97.4 59 66.1
Lsat_1_v5_gn_4_37800 Lactuca sativa HOM05D005970 ORTHO05D007146 8.4e-19 97.4 59 66.1
AUR62042870 Chenopodium quinoa HOM05D005970 ORTHO05D007146 1.1e-18 97.1 54 70.4
SMO336G0028 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 5.5e-18 94.7 59 61.0
SMO337G0034 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 5.5e-18 94.7 59 61.0
SMO337G0042 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 5.5e-18 94.7 59 61.0
Sabra02G0176700 Salix brachista HOM05D005970 ORTHO05D007146 3.5e-17 92.0 58 63.8
AL1G15700 Arabidopsis lyrata HOM05D005970 ORTHO05D007146 7.9e-17 90.9 59 64.4
AT1G05790 Arabidopsis thaliana HOM05D005970 ORTHO05D007146 7.9e-17 90.9 59 64.4
Carub.0001s0513 Capsella rubella HOM05D005970 ORTHO05D007146 7.9e-17 90.9 59 64.4
Thhalv10006938m.g Eutrema salsugineum HOM05D005970 ORTHO05D007146 7.9e-17 90.9 59 64.4
Aa31LG1G8570 Aethionema arabicum HOM05D005970 ORTHO05D007146 1.0e-16 90.5 59 64.4
THA.LOC104800916 Tarenaya hassleriana HOM05D005970 ORTHO05D007146 1.0e-16 90.5 59 64.4
A08p36290 Brassica napus HOM05D005970 ORTHO05D007146 1.3e-16 90.1 59 64.4
C08p02230 Brassica napus HOM05D005970 ORTHO05D007146 1.3e-16 90.1 59 64.4
BolC8t47015H Brassica oleracea HOM05D005970 ORTHO05D007146 1.3e-16 90.1 59 64.4
BraA08t35533Z Brassica rapa HOM05D005970 ORTHO05D007146 1.3e-16 90.1 59 64.4
Sp1g04590 Schrenkiella parvula HOM05D005970 ORTHO05D007146 1.3e-16 90.1 59 64.4
A10p04500 Brassica napus HOM05D005970 ORTHO05D007146 1.8e-16 89.7 59 62.7
C05p04110 Brassica napus HOM05D005970 ORTHO05D007146 1.8e-16 89.7 59 62.7
BolC5t29189H Brassica oleracea HOM05D005970 ORTHO05D007146 1.8e-16 89.7 59 62.7
BraA10t42716Z Brassica rapa HOM05D005970 ORTHO05D007146 1.8e-16 89.7 59 62.7
AagrBONN_evm.TU.Sc2ySwM_368.849 Anthoceros agrestis HOM05D005970 ORTHO05D007146 1.1e-15 87.0 59 57.6
AagrBONN_evm.TU.Sc2ySwM_368.857 Anthoceros agrestis HOM05D005970 ORTHO05D007146 1.1e-15 87.0 59 57.6
Sabra14G0114200 Salix brachista HOM05D005970 ORTHO05D007146 2.8e-14 82.4 108 38.0
CBR_g2768 Chara braunii HOM05D005970 ORTHO05D007146 1.1e-13 80.5 60 51.7
Pp3c6_14360 Physcomitrium patens HOM05D005970 ORTHO05D007146 7.6e-12 74.3 58 51.7
Pp3c5_12210 Physcomitrium patens HOM05D005970 ORTHO05D007146 8.4e-11 70.9 55 54.5
Nn1g09815 Nelumbo nucifera HOM05D005970 ORTHO05D007146 9.3e-10 67.4 31 77.4
CDE09G0649 Ceratophyllum demersum HOM05D005970 ORTHO05D007146 3.3e-07 58.9 31 74.2


User provided reference genes

Program Settings