Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 2.6e-287 991.5 543 100.0
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 2.7e-151 539.7 580 54.8
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 1.8e-147 526.9 545 56.5
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 3.0e-147 526.2 548 56.2
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 1.2e-146 524.2 548 56.4
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 4.6e-143 512.3 546 55.5
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 1.7e-142 510.4 555 54.1
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 3.9e-142 509.2 546 54.0
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 2.9e-137 493.0 545 53.4
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 1.3e-134 484.2 546 53.5
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 3.0e-134 483.0 575 50.6
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 8.6e-134 481.5 545 53.6
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 8.1e-132 474.9 548 54.4
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 2.3e-131 473.4 547 51.9
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 1.2e-130 471.1 567 50.4
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.5e-130 470.7 554 51.1
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 2.6e-130 469.9 556 51.1
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 1.7e-129 467.2 557 50.8
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.1e-128 464.5 552 50.7
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 2.7e-127 459.9 648 46.3
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 4.0e-123 446.0 579 47.8
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 1.2e-122 444.5 545 50.1
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 2.6e-122 443.4 550 48.2
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.7e-121 440.7 550 48.0
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 2.9e-121 439.9 545 48.1
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 1.1e-120 438.0 572 46.7
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 1.2e-119 434.5 510 52.0
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 7.8e-119 431.8 608 45.2
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 5.1e-118 429.1 545 47.9
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 8.6e-118 428.3 550 47.5
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 5.6e-117 425.6 557 47.6
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 7.3e-117 425.2 603 45.4
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 2.4e-115 420.2 541 47.7
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 3.1e-115 419.9 542 48.5
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.2e-114 417.9 604 45.0
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 3.4e-114 416.4 553 47.9
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 1.3e-113 414.5 551 46.6
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 2.2e-113 413.7 546 48.2
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 3.8e-113 412.9 603 44.1
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 7.1e-112 408.7 553 48.1
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 1.2e-111 407.9 547 47.5
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 3.5e-111 406.4 611 44.7
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 2.3e-110 403.7 586 45.7
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 5.1e-110 402.5 481 51.8
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 4.3e-109 399.4 552 47.1
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 4.3e-109 399.4 553 45.2
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 7.3e-109 398.7 545 47.0
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 4.8e-108 396.0 548 45.6
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 8.1e-108 395.2 552 46.9
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 1.1e-107 394.8 542 44.1
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 4.4e-106 389.4 553 46.8
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 4.9e-105 386.0 608 41.9
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 6.4e-105 385.6 615 42.9
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 6.4e-105 385.6 541 45.7
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 3.2e-104 383.3 552 45.5
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 4.2e-104 382.9 560 44.5
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 9.3e-104 381.7 542 44.3
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 2.7e-103 380.2 555 46.1
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 6.0e-103 379.0 549 46.4
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 1.7e-102 377.5 549 43.7
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 1.9e-101 374.0 552 44.7
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 3.3e-101 373.2 556 43.5
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 1.6e-100 370.9 378 56.1
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 5.5e-96 355.9 548 44.3
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 1.1e-93 348.2 566 41.5
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 4.9e-89 332.8 533 43.0
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 1.3e-86 324.7 570 40.9
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 4.3e-85 319.7 548 38.1
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 5.7e-85 319.3 586 40.4
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 1.8e-83 314.3 548 38.7
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 9.0e-83 312.0 481 43.5
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 1.5e-82 311.2 514 38.1
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 4.5e-82 309.7 554 38.3
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 1.7e-81 307.8 563 37.7
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 2.5e-80 303.9 480 43.3
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 9.3e-80 302.0 564 37.9
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 7.9e-79 298.9 552 36.8
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 2.8e-76 290.4 463 42.8
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 2.5e-69 267.3 478 39.7
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 1.1e-64 251.9 468 40.0
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 3.7e-60 236.9 468 36.1
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 3.1e-59 233.8 425 42.6
CSS0007449 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 5.5e-48 196.4 356 40.7
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 4.4e-45 186.8 400 32.2
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 3.0e-38 164.1 483 29.2
TAR633G1182 Trochodendron aralioides HOM05D007575 ORTHO05D009611 6.6e-33 146.4 174 48.3
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 3.0e-30 137.5 127 52.0
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 1.2e-29 135.6 575 26.8
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 1.5e-29 135.2 558 26.3
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 4.4e-29 133.7 225 36.4
Lsat_1_v5_gn_5_138981 Lactuca sativa HOM05D007575 ORTHO05D009611 9.8e-29 132.5 342 31.3
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 2.4e-27 127.9 435 28.3
SalBow5G2148 Salvia bowleyana HOM05D007575 ORTHO05D009611 1.5e-24 118.6 173 40.5
SalBow5G4021 Salvia bowleyana HOM05D007575 ORTHO05D009611 1.5e-24 118.6 173 40.5
Eucgr.A00051 Eucalyptus grandis HOM05D007575 ORTHO05D009611 2.1e-23 114.8 176 43.8
PGSC0003DMG400021612 Solanum tuberosum HOM05D007575 ORTHO05D009611 6.0e-18 96.7 76 63.2
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 1.3e-17 95.5 176 38.1
CBR_g123 Chara braunii HOM05D007575 ORTHO05D009611 8.3e-12 76.3 747 21.2
MBI08_g05086_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 9.5e-08 62.8 61 54.1
Potri.014G075600 Populus trichocarpa HOM05D002884 ORTHO05D003178 6.2e-07 60.1 112 33.0
Sabra14G0056200 Salix brachista HOM05D002884 ORTHO05D003178 6.2e-07 60.1 112 33.0
GSVIVG01013583001 Vitis vinifera HOM05D000264 ORTHO05D000152 3.1e-06 57.8 34 76.5
Gohir.A09G193001 Gossypium hirsutum HOM05D002884 ORTHO05D003178 5.2e-06 57.0 80 35.0
VMungo1215G1054 Vigna mungo HOM05D002884 ORTHO05D003178 5.2e-06 57.0 77 33.8


User provided reference genes

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