Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013469001 Vitis vinifera HOM05D001427 ORTHO05D001320 3.5e-64 248.1 120 100.0
Cfa014174 Carpinus fangiana HOM05D001427 ORTHO05D001320 6.1e-32 141.0 123 64.2
Haze_22898 Corylus avellana HOM05D001427 ORTHO05D001320 3.9e-31 138.3 123 63.4
CiPaw.07G129600 Carya illinoinensis HOM05D001427 ORTHO05D001320 1.1e-30 136.7 124 62.1
Dinv05520 Davidia involucrata HOM05D001427 ORTHO05D001320 2.2e-29 132.5 123 61.8
MD00G1147000 Malus domestica HOM05D001427 ORTHO05D001320 2.8e-29 132.1 123 62.6
Potri.002G001100 Populus trichocarpa HOM05D001427 ORTHO05D001320 1.1e-28 130.2 123 56.1
Prupe.5G000400 Prunus persica HOM05D001427 ORTHO05D001320 7.0e-28 127.5 125 60.8
COL.COLO4_16218 Corchorus olitorius HOM05D001427 ORTHO05D001320 1.0e-26 123.6 119 56.3
Thecc.08G097000 Theobroma cacao HOM05D001427 ORTHO05D001320 2.2e-26 122.5 122 57.4
Sabra02G0000900 Salix brachista HOM05D001427 ORTHO05D006885 1.1e-25 120.2 121 53.7
Ciclev10000992m.g Citrus clementina HOM05D001427 ORTHO05D001320 1.5e-25 119.8 120 57.5
Actinidia17099 Actinidia chinensis HOM05D001427 ORTHO05D001320 7.2e-25 117.5 124 54.0
Manes.18G000200 Manihot esculenta HOM05D001427 ORTHO05D001320 3.6e-24 115.2 120 57.5
Actinidia15535 Actinidia chinensis HOM05D001427 ORTHO05D001320 1.0e-23 113.6 124 53.2
Potri.005G260000 Populus trichocarpa HOM05D001427 ORTHO05D001320 1.0e-23 113.6 81 66.7
Duzib041G0466 Durio zibethinus HOM05D001427 ORTHO05D001320 2.3e-23 112.5 122 56.6
Gohir.A01G101200 Gossypium hirsutum HOM05D001427 ORTHO05D001320 4.0e-23 111.7 120 55.0
QL02p016478 Quercus lobata HOM05D001427 ORTHO05D001320 5.2e-23 111.3 123 56.1
MD16G1282800 Malus domestica HOM05D001427 ORTHO05D001320 6.7e-23 110.9 115 58.3
Atru.chr13.14 Acer truncatum HOM05D001427 ORTHO05D001320 8.8e-23 110.5 132 53.0
Gohir.D01G086100 Gossypium hirsutum HOM05D001427 ORTHO05D001320 8.8e-23 110.5 120 54.2
Gorai.002G111500 Gossypium raimondii HOM05D001427 ORTHO05D001320 8.8e-23 110.5 120 54.2
Duzib093G1659 Durio zibethinus HOM05D001427 ORTHO05D001320 2.0e-22 109.4 102 59.8
Cc10_g12820 Coffea canephora HOM05D001427 ORTHO05D001320 7.5e-22 107.5 73 71.2
vmacro21732 Vaccinium macrocarpon HOM05D001427 ORTHO05D001320 9.7e-22 107.1 124 52.4
TWI12G1006 Tripterygium wilfordii HOM05D001427 ORTHO05D001320 2.2e-21 105.9 121 53.7
Sabra05G0201500 Salix brachista HOM05D001427 ORTHO05D001320 8.3e-21 104.0 69 72.5
Cpa.g.sc36.87 Carica papaya HOM05D001427 ORTHO05D001320 1.1e-20 103.6 160 43.1
TAR625G0385 Trochodendron aralioides HOM05D001427 ORTHO05D001320 3.5e-19 98.6 123 52.0
ClCG11G019210 Citrullus lanatus HOM05D001427 ORTHO05D001320 1.0e-18 97.1 121 46.3
FvH4_5g26800 Fragaria vesca HOM05D001427 ORTHO05D001320 1.3e-18 96.7 73 65.8
FAN18G3491 Fragaria x ananassa HOM05D001427 ORTHO05D001320 1.3e-18 96.7 73 65.8
Medtr1g026560 Medicago truncatula HOM05D001427 ORTHO05D001320 1.3e-18 96.7 116 48.3
Rhsim06G0000300 Rhododendron simsii HOM05D001427 ORTHO05D006885 1.7e-18 96.3 128 47.7
RcHm_v2.0_Chr7g0217711 Rosa chinensis HOM05D001427 ORTHO05D001320 2.9e-18 95.5 73 64.4
TAR628G1114 Trochodendron aralioides HOM05D001427 ORTHO05D001320 2.9e-18 95.5 116 50.0
FAN04G0129 Fragaria x ananassa HOM05D001427 ORTHO05D001320 6.5e-18 94.4 73 65.8
FAN08G3288 Fragaria x ananassa HOM05D001427 ORTHO05D001320 6.5e-18 94.4 73 65.8
Aqoxy5G00923 Aquilegia oxysepala HOM05D001427 ORTHO05D001320 8.5e-18 94.0 126 49.2
MELO3C017075.2 Cucumis melo HOM05D001427 ORTHO05D001320 8.5e-18 94.0 121 46.3
Lj5g0008855 Lotus japonicus HOM05D001427 ORTHO05D001320 8.5e-18 94.0 116 47.4
TAR376G0107 Trochodendron aralioides HOM05D001427 ORTHO05D001320 1.1e-17 93.6 116 48.3
VMungo0647G1928 Vigna mungo HOM05D001427 ORTHO05D001320 1.1e-17 93.6 113 47.8
Glyma.14G224200 Glycine max HOM05D001427 ORTHO05D001320 4.2e-17 91.7 116 47.4
TPR.G26423 Trifolium pratense HOM05D001427 ORTHO05D001320 4.2e-17 91.7 119 46.2
CsaV3_4G037810 Cucumis sativus L. HOM05D001427 ORTHO05D001320 2.7e-16 89.0 121 46.3
Lalb_Chr01g0008241 Lupinus albus HOM05D001427 ORTHO05D001320 2.7e-16 89.0 124 46.0
AUR62042531 Chenopodium quinoa HOM05D001427 ORTHO05D001320 3.6e-16 88.6 105 49.5
Phvul.L001611 Phaseolus vulgaris HOM05D001427 ORTHO05D001320 3.6e-16 88.6 116 47.4
Eucgr.F01956 Eucalyptus grandis HOM05D001427 ORTHO05D001320 4.7e-16 88.2 73 63.0
AUR62035194 Chenopodium quinoa HOM05D001427 ORTHO05D001320 1.0e-15 87.0 97 52.6
arahy.Tifrunner.gnm1.ann1.MCT3JP Arachis hypogaea HOM05D001427 ORTHO05D001320 2.3e-15 85.9 116 44.0
CSS0008953 Camellia sinensis var. sinensis HOM05D001427 ORTHO05D001320 2.3e-15 85.9 75 61.3
Lalb_Chr03g0033731 Lupinus albus HOM05D001427 ORTHO05D001320 2.3e-15 85.9 125 45.6
FAN13G3231 Fragaria x ananassa HOM05D001427 ORTHO05D001320 3.0e-15 85.5 72 62.5
Glyma.17G262500 Glycine max HOM05D001427 ORTHO05D001320 3.0e-15 85.5 116 44.8
arahy.Tifrunner.gnm1.ann1.T53XC3 Arachis hypogaea HOM05D001427 ORTHO05D001320 4.0e-15 85.1 116 44.0
PSO017G6586 Papaver somniferum HOM05D001427 ORTHO05D001320 1.5e-14 83.2 74 58.1
PSO170G5991 Papaver somniferum HOM05D001427 ORTHO05D001320 1.5e-14 83.2 74 58.1
Sed0005403 Sechium edule HOM05D001427 ORTHO05D001320 1.5e-14 83.2 120 43.3
DCAR_023010 Daucus carota HOM05D001427 ORTHO05D001320 5.7e-14 81.3 107 45.8
Nitab4.5_0001309g0130 Nicotiana tabacum HOM05D001427 ORTHO05D001320 1.3e-13 80.1 119 42.0
PGR083G0133 Punica granatum HOM05D001427 ORTHO05D001320 2.2e-13 79.3 99 48.5
THA.LOC104813212 Tarenaya hassleriana HOM05D001427 ORTHO05D001320 2.2e-13 79.3 76 56.6
Nitab4.5_0003423g0050 Nicotiana tabacum HOM05D001427 ORTHO05D001320 2.8e-13 79.0 79 54.4
Aa31LG4G6760 Aethionema arabicum HOM05D001427 ORTHO05D001320 3.7e-13 78.6 101 47.5
EL10Ac1g01747 Beta vulgaris HOM05D001427 ORTHO05D001320 3.7e-13 78.6 105 43.8
Eucgr.F03634 Eucalyptus grandis HOM05D001427 ORTHO05D001320 1.1e-12 77.0 104 47.1
Oeu061451.1 Olea europaea HOM05D001427 ORTHO05D001320 1.1e-12 77.0 117 41.9
Oeu046068.1 Olea europaea HOM05D001427 ORTHO05D001320 3.1e-12 75.5 78 50.0
THA.LOC104801649 Tarenaya hassleriana HOM05D001427 ORTHO05D001320 3.1e-12 75.5 76 56.6
Hund05062 Selenicereus undatus HOM05D001427 ORTHO05D001320 9.1e-12 73.9 56 64.3
PGSC0003DMG400029308 Solanum tuberosum HOM05D001427 ORTHO05D001320 7.7e-11 70.9 79 49.4
Peaxi162Scf00064g01427 Petunia axillaris HOM05D001427 ORTHO05D001320 2.9e-10 68.9 70 51.4
Solyc12g095780.2 Solanum lycopersicum HOM05D001427 ORTHO05D001320 2.9e-10 68.9 81 46.9
Sopen12g031680 Solanum pennellii HOM05D001427 ORTHO05D001320 2.9e-10 68.9 81 46.9
MBI01_g32853_MAGBIO Magnolia biondii HOM05D001427 ORTHO05D001320 3.8e-10 68.6 107 39.3
SalBow6G1519 Salvia bowleyana HOM05D001427 ORTHO05D001320 1.9e-09 66.2 74 52.7
Actinidia37288 Actinidia chinensis HOM05D001427 ORTHO05D001320 3.3e-09 65.5 78 46.2
CAN.G208.44 Capsicum annuum HOM05D001427 ORTHO05D001320 3.3e-09 65.5 78 46.2
SalBow7G2397 Salvia bowleyana HOM05D001427 ORTHO05D001320 5.5e-09 64.7 51 62.7
Lalb_Chr19g0131801 Lupinus albus HOM05D001427 ORTHO05D001320 7.2e-09 64.3 71 53.5
Lj4A814T58 Lonicera japonica HOM05D001427 ORTHO05D001320 9.5e-09 63.9 95 46.3
Thhalv10005687m.g Eutrema salsugineum HOM05D001427 ORTHO05D001320 1.6e-08 63.2 59 61.0
Manes.05G113447 Manihot esculenta HOM05D001427 ORTHO05D001320 1.6e-08 63.2 71 52.1
MSTRG.970 Avicennia marina HOM05D001427 ORTHO05D001320 2.1e-08 62.8 111 39.6
A08p06430 Brassica napus HOM05D001427 ORTHO05D001320 2.1e-08 62.8 90 46.7
BraA08t32652Z Brassica rapa HOM05D001427 ORTHO05D001320 2.1e-08 62.8 90 46.7
BcaC07g37306 Brassica carinata HOM05D001427 ORTHO05D001320 2.8e-08 62.4 59 61.0
C08p07410 Brassica napus HOM05D001427 ORTHO05D001320 2.8e-08 62.4 59 61.0
CSS0043814 Camellia sinensis var. sinensis HOM05D001427 ORTHO05D001320 2.8e-08 62.4 119 38.7
Sp1g32290 Schrenkiella parvula HOM05D001427 ORTHO05D001320 4.7e-08 61.6 59 59.3
MSTRG.24937 Avicennia marina HOM05D001427 ORTHO05D001320 6.1e-08 61.2 78 46.2
PGR031G2421 Punica granatum HOM05D001427 ORTHO05D001320 6.1e-08 61.2 125 38.4
HanXRQChr07g0204331 Helianthus annuus HOM05D001427 ORTHO05D001320 8.0e-08 60.8 50 62.0
Carub.0001s3442 Capsella rubella HOM05D001427 ORTHO05D001320 1.4e-07 60.1 74 54.1
Sc15g0003990 Simmondsia chinensis HOM05D001427 ORTHO05D001320 1.4e-07 60.1 93 45.2
Migut.C00152 Erythranthe guttata HOM05D001427 ORTHO05D001320 2.3e-07 59.3 43 60.5
A07p28400 Brassica napus HOM05D001427 ORTHO05D001320 3.0e-07 58.9 97 41.2
Oeu036722.1 Olea europaea HOM05D001427 ORTHO05D001320 3.0e-07 58.9 74 41.9
Thhalv10018563m.g Eutrema salsugineum HOM05D001427 ORTHO05D001320 4.0e-07 58.5 99 37.4
Lsat_1_v5_gn_8_25641 Lactuca sativa HOM05D001427 ORTHO05D001320 4.0e-07 58.5 57 50.9
C06p31860 Brassica napus HOM05D001427 ORTHO05D001320 6.8e-07 57.8 97 40.2
BolC6t38312H Brassica oleracea HOM05D001427 ORTHO05D001320 6.8e-07 57.8 97 40.2
BcaB04g17616 Brassica carinata HOM05D001427 ORTHO05D001320 8.9e-07 57.4 59 57.6
BcaC08g45514 Brassica carinata HOM05D001427 ORTHO05D001320 8.9e-07 57.4 97 39.2
Aa31LG6G10030 Aethionema arabicum HOM05D001427 ORTHO05D001320 1.5e-06 56.6 72 50.0
BcaB02g07072 Brassica carinata HOM05D001427 ORTHO05D001320 2.0e-06 56.2 97 39.2
unitig_21.g20597 Utricularia gibba HOM05D001427 ORTHO05D001320 2.0e-06 56.2 63 50.8
CARHR035270 Cardamine hirsuta HOM05D001427 ORTHO05D001320 2.6e-06 55.8 41 73.2
SGA_v2.0_scaffold188G40295 Striga asiatica HOM05D001427 ORTHO05D001320 2.6e-06 55.8 67 47.8
unitig_744.g24088 Utricularia gibba HOM05D001427 ORTHO05D001320 2.6e-06 55.8 69 47.8
CARHR070220 Cardamine hirsuta HOM05D001427 ORTHO05D001320 5.7e-06 54.7 98 39.8
Sp5g31820 Schrenkiella parvula HOM05D001427 ORTHO05D001320 5.7e-06 54.7 97 39.2
THA.LOC104812027 Tarenaya hassleriana HOM05D001427 ORTHO05D001320 5.7e-06 54.7 44 61.4
AT1G76660 Arabidopsis thaliana HOM05D001427 ORTHO05D001320 7.5e-06 54.3 97 37.1


User provided reference genes

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