Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 8.1e-191 670.2 336 100.0
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 8.2e-127 457.6 360 67.2
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 1.2e-122 443.7 350 65.7
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 3.6e-122 442.2 339 68.1
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 4.7e-122 441.8 340 66.8
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 4.7e-122 441.8 343 67.6
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 4.4e-120 435.3 342 67.3
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 1.2e-117 427.2 327 68.2
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 7.7e-117 424.5 330 67.3
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 2.2e-116 422.9 364 64.0
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 8.5e-116 421.0 338 65.7
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 1.2e-114 417.2 357 62.7
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 2.1e-114 416.4 359 62.1
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 8.0e-114 414.5 338 67.2
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 8.0e-114 414.5 360 63.3
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 1.5e-112 410.2 346 64.2
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.7e-111 406.8 346 63.6
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 4.1e-110 402.1 381 60.6
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 1.2e-109 400.6 360 61.1
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 2.0e-109 399.8 344 64.0
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.0e-108 397.5 374 61.0
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 5.0e-108 395.2 360 61.7
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 8.6e-108 394.4 377 58.9
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 9.5e-107 391.0 381 59.3
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 1.6e-106 390.2 338 60.1
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 2.8e-106 389.4 317 65.6
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 2.0e-104 383.3 253 75.9
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 3.4e-104 382.5 290 70.3
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 5.7e-104 381.7 363 59.0
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 2.2e-103 379.8 306 66.3
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 2.8e-103 379.4 335 61.2
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 1.8e-102 376.7 357 59.7
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 1.8e-102 376.7 306 66.0
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 2.4e-102 376.3 268 73.9
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 2.4e-102 376.3 272 70.6
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 4.1e-102 375.6 358 59.5
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 5.4e-102 375.2 335 61.2
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 5.9e-101 371.7 346 59.0
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 7.8e-101 371.3 300 66.0
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 7.8e-101 371.3 339 60.5
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 1.7e-100 370.2 352 58.2
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 8.6e-100 367.9 245 74.7
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 1.5e-99 367.1 332 59.0
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 1.5e-99 367.1 325 59.4
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 4.3e-99 365.5 249 72.3
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 5.6e-99 365.2 248 73.4
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 8.0e-98 361.3 313 60.4
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 1.0e-97 360.9 328 58.2
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 2.3e-97 359.8 301 62.8
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 5.2e-97 358.6 338 59.8
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 5.2e-97 358.6 307 60.6
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 1.2e-96 357.5 348 56.9
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 2.0e-96 356.7 323 61.6
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 2.6e-96 356.3 336 56.8
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 7.5e-96 354.8 373 55.2
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 9.8e-96 354.4 359 56.5
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 9.8e-96 354.4 331 59.5
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 1.3e-95 354.0 357 56.6
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 1.7e-95 353.6 341 57.8
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 1.4e-94 350.5 243 72.8
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 2.4e-94 349.7 362 53.9
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 2.4e-94 349.7 301 64.8
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 2.4e-94 349.7 327 58.1
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 2.4e-94 349.7 378 53.2
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 2.4e-94 349.7 337 55.5
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 9.2e-94 347.8 326 58.6
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 1.6e-93 347.1 350 55.7
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 2.0e-93 346.7 304 61.2
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 3.5e-93 345.9 334 57.2
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 4.6e-93 345.5 348 54.0
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 4.6e-93 345.5 269 68.0
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 1.7e-92 343.6 244 71.7
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.3e-92 343.2 334 56.9
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 5.0e-92 342.0 275 68.7
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 1.5e-91 340.5 273 65.9
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 5.6e-91 338.6 239 71.1
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.6e-90 337.0 334 56.0
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 1.6e-90 337.0 289 63.3
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 4.7e-90 335.5 341 54.0
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 4.7e-90 335.5 369 52.0
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 4.7e-90 335.5 369 52.0
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 1.4e-89 334.0 367 51.8
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 1.8e-89 333.6 302 58.6
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 1.8e-89 333.6 339 54.9
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 3.1e-89 332.8 369 51.5
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 3.1e-89 332.8 323 55.4
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 3.1e-89 332.8 282 61.3
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 4.0e-89 332.4 370 52.2
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 5.2e-89 332.0 367 51.5
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 6.8e-89 331.6 334 55.7
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.2e-88 330.9 349 53.9
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 1.5e-88 330.5 369 50.1
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 7.5e-88 328.2 312 55.8
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 2.2e-87 326.6 242 69.8
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 2.2e-87 326.6 217 74.7
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 3.2e-86 322.8 261 65.1
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 2.1e-85 320.1 306 56.2
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 9.5e-83 311.2 238 67.6
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 2.1e-82 310.1 298 57.4
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 4.7e-82 308.9 175 83.4
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 6.2e-82 308.5 205 74.1
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 2.0e-80 303.5 242 65.3
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 8.3e-79 298.1 252 63.5
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 3.5e-77 292.7 233 68.7
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 4.0e-73 279.3 187 72.2
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 1.9e-70 270.4 209 62.7
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 2.7e-69 266.5 263 50.6
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 3.3e-67 259.6 277 49.8
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 9.6e-67 258.1 251 52.2
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 3.6e-66 256.1 242 53.7
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 4.9e-63 245.7 150 82.0
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 2.1e-53 213.8 121 84.3
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 2.3e-52 210.3 189 54.5
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 1.1e-51 208.0 249 47.4
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 9.6e-51 204.9 179 55.9
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 3.1e-49 199.9 192 53.6
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 4.5e-48 196.1 103 89.3
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 7.6e-48 195.3 192 51.6
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 2.9e-31 140.2 79 81.0
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 3.2e-30 136.7 69 89.9
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 2.5e-22 110.5 188 42.6
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 3.8e-15 86.7 58 69.0
TAR188G0003 Trochodendron aralioides HOM05D005712 ORTHO05D007865 1.2e-13 81.6 106 44.3
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 8.2e-10 68.9 135 34.1
BcaC07g39055 Brassica carinata HOM05D005712 ORTHO05D032168 2.2e-07 60.8 143 33.6
C08p20390 Brassica napus HOM05D005712 ORTHO05D032168 2.2e-07 60.8 138 35.5
Cpa.g.c30633.1 Carica papaya HOM05D005712 ORTHO05D120172 6.5e-07 59.3 61 59.0
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 1.9e-06 57.8 43 62.8


User provided reference genes

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