Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 8.2e-100 367.1 188 100.0
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 1.3e-76 290.0 181 81.2
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 3.7e-76 288.5 175 82.3
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 2.4e-75 285.8 184 78.8
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 2.4e-75 285.8 188 77.7
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 3.1e-75 285.4 160 86.9
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 4.1e-75 285.0 158 89.9
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 5.3e-75 284.6 169 84.6
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 3.5e-74 282.0 182 78.0
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 3.8e-73 278.5 187 76.5
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 6.5e-73 277.7 186 78.0
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 1.1e-72 276.9 169 80.5
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 1.6e-71 273.1 181 77.9
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 2.1e-71 272.7 182 75.8
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 3.6e-71 271.9 169 78.7
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 6.1e-71 271.2 185 75.1
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 6.1e-71 271.2 178 76.4
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 1.0e-70 270.4 170 78.8
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 1.4e-70 270.0 187 71.7
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 1.4e-70 270.0 184 72.8
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 2.3e-70 269.2 191 72.3
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 5.2e-70 268.1 182 74.7
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 8.8e-70 267.3 182 74.7
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 1.2e-69 266.9 191 71.7
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 2.0e-69 266.2 164 77.4
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 4.4e-69 265.0 175 76.6
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 5.7e-69 264.6 176 75.0
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 9.8e-69 263.8 184 75.0
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 9.8e-69 263.8 182 74.2
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 9.8e-69 263.8 182 75.8
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 1.3e-68 263.5 182 74.7
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 1.3e-68 263.5 182 74.7
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 1.7e-68 263.1 171 78.4
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 2.2e-68 262.7 163 80.4
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 2.8e-68 262.3 188 72.3
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 3.7e-68 261.9 167 77.8
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 4.8e-68 261.5 167 76.6
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 6.3e-68 261.2 163 79.8
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 8.3e-68 260.8 160 78.8
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 1.1e-67 260.4 184 74.5
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.1e-67 260.4 167 77.2
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 4.1e-67 258.5 191 70.7
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 4.1e-67 258.5 161 81.4
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 5.4e-67 258.1 171 77.2
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 5.4e-67 258.1 167 76.6
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 5.4e-67 258.1 176 72.7
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 7.0e-67 257.7 170 74.1
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 1.2e-66 256.9 178 71.9
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 5.9e-66 254.6 185 71.9
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 2.3e-65 252.7 180 73.3
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 3.8e-65 251.9 187 72.2
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 3.8e-65 251.9 179 73.7
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 5.0e-65 251.5 184 69.6
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 7.2e-64 247.7 191 70.2
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 1.2e-63 246.9 166 71.7
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 3.6e-63 245.4 184 66.3
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 3.6e-63 245.4 230 59.1
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 6.1e-63 244.6 182 72.0
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 6.1e-63 244.6 175 70.3
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 5.2e-62 241.5 179 72.6
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 8.8e-62 240.7 182 65.9
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 1.2e-61 240.4 177 66.1
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 3.4e-61 238.8 160 74.4
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 4.4e-61 238.4 177 65.5
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 9.8e-61 237.3 188 64.9
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 9.8e-61 237.3 175 68.6
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 1.8e-59 233.0 188 69.1
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 1.8e-59 233.0 168 69.6
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 4.1e-59 231.9 188 64.9
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 5.4e-59 231.5 185 65.4
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 7.0e-59 231.1 188 62.8
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 1.2e-58 230.3 182 64.8
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.6e-58 229.9 147 78.2
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 2.7e-58 229.2 188 67.0
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 2.7e-58 229.2 168 68.5
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 3.5e-58 228.8 188 67.0
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 1.7e-57 226.5 168 66.1
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 1.7e-57 226.5 168 66.1
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 1.7e-57 226.5 182 63.2
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 3.8e-57 225.3 168 65.5
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 3.8e-57 225.3 168 65.5
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 5.0e-57 224.9 168 65.5
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 6.6e-57 224.6 139 82.7
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 6.6e-57 224.6 152 75.0
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 3.3e-56 222.2 168 65.5
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 4.3e-56 221.9 147 76.2
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 1.0e-54 217.2 182 61.5
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 4.0e-54 215.3 168 64.3
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 5.2e-54 214.9 133 79.7
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 1.2e-53 213.8 138 76.1
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 4.9e-52 208.4 161 65.2
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 7.8e-50 201.1 133 75.9
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 4.1e-43 178.7 199 53.3
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 1.3e-41 173.7 188 50.5
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 1.5e-40 170.2 118 69.5
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 6.2e-39 164.9 162 57.4
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 5.2e-38 161.8 161 50.9
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 5.8e-37 158.3 178 52.8
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 1.3e-36 157.1 195 46.7
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 1.5e-32 143.7 97 77.3
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 2.8e-31 139.4 83 75.9
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 1.9e-27 126.7 170 45.3
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 2.1e-26 123.2 128 52.3
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.0e-25 120.9 89 68.5
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 6.9e-22 108.2 175 42.3
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 1.7e-20 103.6 97 55.7
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 2.2e-20 103.2 77 71.4
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 3.8e-20 102.4 167 35.3
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 1.3e-17 94.0 138 39.9
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 3.4e-13 79.3 61 60.7
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 5.1e-09 65.5 40 77.5
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 2.1e-07 60.1 78 43.6
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 4.0e-06 55.8 36 69.4


User provided reference genes

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