Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013391001 Vitis vinifera HOM05D001617 ORTHO05D008611 9.6e-98 360.1 181 100.0
TAR625G0652 Trochodendron aralioides HOM05D001617 ORTHO05D008611 8.8e-51 204.1 180 59.4
CSS0049801 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 4.5e-47 191.8 168 58.3
Nn5g30995 Nelumbo nucifera HOM05D001617 ORTHO05D008611 5.9e-47 191.4 180 57.2
Dinv40191 Davidia involucrata HOM05D001617 ORTHO05D008611 2.3e-46 189.5 181 54.1
CSS0040657 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 3.8e-46 188.7 168 58.3
RcHm_v2.0_Chr2g0097101 Rosa chinensis HOM05D001617 ORTHO05D008611 4.2e-45 185.3 176 56.8
FAN19G1097 Fragaria x ananassa HOM05D001617 ORTHO05D002495 9.5e-45 184.1 181 54.1
QL02p015100 Quercus lobata HOM05D001617 ORTHO05D008611 2.1e-44 183.0 177 59.3
Actinidia22895 Actinidia chinensis HOM05D001617 ORTHO05D008611 2.8e-44 182.6 175 54.9
FvH4_1g10271 Fragaria vesca HOM05D001617 ORTHO05D008611 2.8e-44 182.6 176 55.1
Actinidia17356 Actinidia chinensis HOM05D001617 ORTHO05D008611 3.6e-44 182.2 167 59.3
MD15G1230700 Malus domestica HOM05D001617 ORTHO05D008611 3.6e-44 182.2 176 55.7
MD02G1114800 Malus domestica HOM05D001617 ORTHO05D008611 6.1e-44 181.4 176 54.0
Prupe.7G183400 Prunus persica HOM05D001617 ORTHO05D008611 1.4e-43 180.3 174 54.6
Potri.018G026700 Populus trichocarpa HOM05D001617 ORTHO05D008611 1.8e-43 179.9 181 52.5
Haze_03607 Corylus avellana HOM05D001617 ORTHO05D008611 5.2e-43 178.3 181 52.5
Potri.006G255301 Populus trichocarpa HOM05D001617 ORTHO05D008611 1.5e-42 176.8 179 52.0
Hma1.2p1_0300F.1_g117970 Hydrangea macrophylla HOM05D001617 ORTHO05D008611 2.6e-42 176.0 168 56.0
Manes.03G014200 Manihot esculenta HOM05D001617 ORTHO05D008611 3.4e-42 175.6 178 50.0
AUR62003746 Chenopodium quinoa HOM05D001617 ORTHO05D008611 1.3e-41 173.7 181 48.1
Rhsim10G0195300 Rhododendron simsii HOM05D001617 ORTHO05D008611 3.7e-41 172.2 177 54.2
Lalb_Chr05g0214811 Lupinus albus HOM05D001617 ORTHO05D008611 4.9e-41 171.8 177 52.0
Cc07_g11900 Coffea canephora HOM05D001617 ORTHO05D008611 6.3e-41 171.4 173 53.8
Phvul.002G116800 Phaseolus vulgaris HOM05D001617 ORTHO05D008611 6.3e-41 171.4 177 50.3
Sabra06G0199600 Salix brachista HOM05D001617 ORTHO05D008611 1.4e-40 170.2 182 50.5
Duzib147G0359 Durio zibethinus HOM05D001617 ORTHO05D008611 1.8e-40 169.9 180 53.3
TPR.G27884 Trifolium pratense HOM05D001617 ORTHO05D008611 1.8e-40 169.9 181 49.2
Ca_24984_v3 Cicer arietinum L. HOM05D001617 ORTHO05D008611 3.1e-40 169.1 177 51.4
Sc07g0001380 Simmondsia chinensis HOM05D001617 ORTHO05D008611 3.1e-40 169.1 173 52.6
TPR.G24692 Trifolium pratense HOM05D001617 ORTHO05D008611 5.4e-40 168.3 177 50.3
CiPaw.08G181900 Carya illinoinensis HOM05D001617 ORTHO05D008611 7.0e-40 167.9 180 50.6
arahy.Tifrunner.gnm1.ann1.00REGV Arachis hypogaea HOM05D001617 ORTHO05D008611 9.2e-40 167.5 182 50.0
arahy.Tifrunner.gnm1.ann1.P3NXZX Arachis hypogaea HOM05D001617 ORTHO05D008611 9.2e-40 167.5 182 50.0
Psat4g142640 Pisum sativum HOM05D001617 ORTHO05D008611 1.2e-39 167.2 177 49.2
Glyma.01G158500 Glycine max HOM05D001617 ORTHO05D008611 1.6e-39 166.8 177 50.3
AUR62002049 Chenopodium quinoa HOM05D001617 ORTHO05D008611 2.0e-39 166.4 181 46.4
Glyma.11G086100 Glycine max HOM05D001617 ORTHO05D008611 2.7e-39 166.0 176 48.9
Thecc.01G005100 Theobroma cacao HOM05D001617 ORTHO05D008611 3.5e-39 165.6 181 50.3
Lj2g0016890 Lotus japonicus HOM05D001617 ORTHO05D008611 5.9e-39 164.9 178 50.6
Atru.chr3.130 Acer truncatum HOM05D001617 ORTHO05D008611 1.0e-38 164.1 182 48.9
FAN23G1150 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.0e-38 164.1 211 44.5
Solyc02g038814.1 Solanum lycopersicum HOM05D001617 ORTHO05D008611 2.9e-38 162.5 171 50.3
Sopen02g012580 Solanum pennellii HOM05D001617 ORTHO05D008611 2.9e-38 162.5 171 50.3
Aqoxy6G01611 Aquilegia oxysepala HOM05D001617 ORTHO05D008611 5.0e-38 161.8 177 49.7
AT4G35530 Arabidopsis thaliana HOM05D001617 ORTHO05D008611 6.6e-38 161.4 186 49.5
Sed0024019 Sechium edule HOM05D001617 ORTHO05D008611 6.6e-38 161.4 178 46.1
ECA240G2496 Erigeron canadensis HOM05D001617 ORTHO05D008611 8.6e-38 161.0 174 51.1
Medtr7g006210 Medicago truncatula HOM05D001617 ORTHO05D008611 8.6e-38 161.0 171 49.1
Lalb_Chr16g0380051 Lupinus albus HOM05D001617 ORTHO05D008611 1.5e-37 160.2 177 48.6
QL02p015033 Quercus lobata HOM05D001617 ORTHO05D008611 1.9e-37 159.8 162 57.4
CsaV3_3G000210 Cucumis sativus L. HOM05D001617 ORTHO05D008611 2.5e-37 159.5 183 46.4
QL06p053003 Quercus lobata HOM05D001617 ORTHO05D008611 3.3e-37 159.1 181 48.6
HanXRQChr03g0061381 Helianthus annuus HOM05D001617 ORTHO05D008611 5.6e-37 158.3 176 50.0
Lsat_1_v5_gn_7_41980 Lactuca sativa HOM05D001617 ORTHO05D008611 5.6e-37 158.3 169 50.3
Ciclev10026581m.g Citrus clementina HOM05D001617 ORTHO05D008611 7.3e-37 157.9 177 49.7
AL7G15630 Arabidopsis lyrata HOM05D001617 ORTHO05D008611 1.2e-36 157.1 185 46.5
Eucgr.I02221 Eucalyptus grandis HOM05D001617 ORTHO05D008611 1.6e-36 156.8 173 50.3
Peaxi162Scf00580g00110 Petunia axillaris HOM05D001617 ORTHO05D008611 1.6e-36 156.8 177 50.3
Nitab4.5_0001365g0060 Nicotiana tabacum HOM05D001617 ORTHO05D008611 2.1e-36 156.4 182 47.8
PGR119G0287 Punica granatum HOM05D001617 ORTHO05D008611 6.1e-36 154.8 166 49.4
ATR0807G073 Amborella trichopoda HOM05D001617 ORTHO05D008611 8.0e-36 154.5 180 46.1
HPP92_001135 Vanilla planifolia HOM05D001617 ORTHO05D008611 1.0e-35 154.1 166 46.4
Migut.H02499 Erythranthe guttata HOM05D001617 ORTHO05D008611 1.8e-35 153.3 186 45.2
Carub.0007s0479 Capsella rubella HOM05D001617 ORTHO05D008611 2.3e-35 152.9 182 46.7
THA.LOC104819716 Tarenaya hassleriana HOM05D001617 ORTHO05D008611 4.0e-35 152.1 186 46.8
A01p03080 Brassica napus HOM05D001617 ORTHO05D008611 5.2e-35 151.8 182 46.7
PGSC0003DMG400017488 Solanum tuberosum HOM05D001617 ORTHO05D008611 5.2e-35 151.8 193 46.1
PSO210G2591 Papaver somniferum HOM05D001617 ORTHO05D008611 1.2e-34 150.6 183 47.0
BraA01t00292Z Brassica rapa HOM05D001617 ORTHO05D008611 1.5e-34 150.2 182 46.2
Aa31LG6G12490 Aethionema arabicum HOM05D001617 ORTHO05D008611 2.0e-34 149.8 181 47.5
Thhalv10026286m.g Eutrema salsugineum HOM05D001617 ORTHO05D008611 2.0e-34 149.8 187 46.5
TWI09G0535 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 2.0e-34 149.8 170 50.0
Nitab4.5_0000467g0050 Nicotiana tabacum HOM05D001617 ORTHO05D008611 2.6e-34 149.4 199 43.7
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 9.8e-34 147.5 117 60.7
C07p61220 Brassica napus HOM05D001617 ORTHO05D008611 2.9e-33 146.0 182 46.2
BolC7t46548H Brassica oleracea HOM05D001617 ORTHO05D008611 2.9e-33 146.0 182 46.2
SGA_v2.0_scaffold280G46856 Striga asiatica HOM05D001617 ORTHO05D008611 4.9e-33 145.2 180 46.7
A03p63650 Brassica napus HOM05D001617 ORTHO05D008611 6.4e-33 144.8 170 47.6
BraA03t15436Z Brassica rapa HOM05D001617 ORTHO05D008611 6.4e-33 144.8 170 47.6
Gohir.A02G178000 Gossypium hirsutum HOM05D001617 ORTHO05D008611 6.4e-33 144.8 169 52.7
Gohir.D03G001800 Gossypium hirsutum HOM05D001617 ORTHO05D008611 6.4e-33 144.8 169 51.5
Os05g0165400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 1.4e-32 143.7 160 48.8
PSO761G0409 Papaver somniferum HOM05D001617 ORTHO05D008611 1.9e-32 143.3 186 45.7
BcaNung03634 Brassica carinata HOM05D001617 ORTHO05D008611 2.4e-32 142.9 176 44.3
Gorai.003G002100 Gossypium raimondii HOM05D001617 ORTHO05D008611 3.2e-32 142.5 160 52.5
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 4.1e-32 142.1 139 56.8
Sp7g33310 Schrenkiella parvula HOM05D001617 ORTHO05D008611 5.4e-32 141.7 177 45.2
MELO3C013716.2 Cucumis melo HOM05D001617 ORTHO05D008611 2.3e-30 136.3 92 65.2
Medtr8g446540 Medicago truncatula HOM05D001617 ORTHO05D008611 3.0e-30 136.0 153 47.7
SalBow8G0576 Salvia bowleyana HOM05D001617 ORTHO05D008611 5.0e-30 135.2 156 45.5
Lj2g0001157 Lotus japonicus HOM05D001617 ORTHO05D008611 3.3e-29 132.5 110 61.8
Zm00001eb123330 Zea mays HOM05D001617 ORTHO05D008611 5.6e-29 131.7 161 49.7
CARHR243860 Cardamine hirsuta HOM05D001617 ORTHO05D008611 9.5e-29 131.0 107 57.9
ClCG10G000190 Citrullus lanatus HOM05D001617 ORTHO05D008611 9.5e-29 131.0 200 40.0
Hund03599 Selenicereus undatus HOM05D001617 ORTHO05D008611 3.1e-27 125.9 180 43.3
SEGI_30027 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 4.0e-27 125.6 174 40.2
EL10Ac6g15051 Beta vulgaris HOM05D001617 ORTHO05D008611 5.2e-27 125.2 221 36.2
CANSAT25G0226 Cannabis sativa HOM05D001617 ORTHO05D008611 1.5e-26 123.6 131 51.1
TWI73G0916 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 4.4e-26 122.1 124 54.8
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 1.7e-25 120.2 154 42.9
Manes.03G014750 Manihot esculenta HOM05D001617 ORTHO05D008611 1.7e-25 120.2 178 39.3
COL.COLO4_22553 Corchorus olitorius HOM05D001617 ORTHO05D008611 2.9e-25 119.4 175 40.6
FAN26G0309 Fragaria x ananassa HOM05D001617 ORTHO05D002495 6.4e-25 118.2 83 63.9
BcaNung00584 Brassica carinata HOM05D001617 ORTHO05D008611 1.4e-24 117.1 182 40.7
SEGI_12529 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 1.4e-24 117.1 99 53.5
TAR381G0965 Trochodendron aralioides HOM05D001617 ORTHO05D008611 4.3e-21 105.5 75 66.7
unitig_46.g18791 Utricularia gibba HOM05D001617 ORTHO05D008611 1.6e-20 103.6 177 36.2
Pp3c25_310 Physcomitrium patens HOM05D001617 ORTHO05D008611 2.3e-19 99.8 87 54.0
C01p03430 Brassica napus HOM05D001617 ORTHO05D008611 1.5e-18 97.1 204 36.8
BolC1t00330H Brassica oleracea HOM05D001617 ORTHO05D008611 1.5e-18 97.1 204 36.8
Os01g0166400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 2.0e-18 96.7 69 58.0
AagrBONN_evm.TU.Sc2ySwM_368.1506 Anthoceros agrestis HOM05D001617 ORTHO05D008611 9.9e-18 94.4 99 43.4
Mapoly0064s0006 Marchantia polymorpha HOM05D001617 ORTHO05D008611 1.7e-17 93.6 106 42.5
arahy.Tifrunner.gnm1.ann1.JF0LYH Arachis hypogaea HOM05D001617 ORTHO05D008611 7.3e-13 78.2 87 51.7
FAN28G0538 Fragaria x ananassa HOM05D001617 ORTHO05D002495 3.6e-12 75.9 83 49.4
CBR_g38242 Chara braunii HOM05D001617 ORTHO05D008611 6.8e-11 71.6 88 37.5
Medtr7g005770 Medicago truncatula HOM05D001617 ORTHO05D008611 6.8e-11 71.6 66 53.0
SHI18558 Sapria himalayana HOM05D000291 ORTHO05D001358 1.7e-09 67.0 150 32.7


User provided reference genes

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