Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013352001 Vitis vinifera HOM05D000842 ORTHO05D000650 2.1e-97 359.0 176 100.0
GSVIVG01016844001 Vitis vinifera HOM05D000842 ORTHO05D000650 6.0e-20 101.7 61 83.6
Lj5C46T6 Lonicera japonica HOM05D000842 ORTHO05D000650 1.1e-16 90.9 54 81.5
Gohir.A02G115500 Gossypium hirsutum HOM05D000842 ORTHO05D000650 4.0e-16 89.0 54 79.6
Gohir.D03G056500 Gossypium hirsutum HOM05D000842 ORTHO05D000650 4.0e-16 89.0 54 79.6
Gorai.003G059600 Gossypium raimondii HOM05D000842 ORTHO05D000650 4.0e-16 89.0 54 79.6
Actinidia09026 Actinidia chinensis HOM05D000842 ORTHO05D000650 5.3e-16 88.6 54 81.5
TAR383G0631 Trochodendron aralioides HOM05D000842 ORTHO05D000650 1.2e-15 87.4 54 79.6
Dinv37922 Davidia involucrata HOM05D000842 ORTHO05D000650 1.5e-15 87.0 54 77.8
Thecc.06G109500 Theobroma cacao HOM05D000842 ORTHO05D000650 2.0e-15 86.7 54 77.8
CSS0009776 Camellia sinensis var. sinensis HOM05D000842 ORTHO05D000650 2.6e-15 86.3 52 80.8
VMungo1080G1632 Vigna mungo HOM05D000842 ORTHO05D000650 3.4e-15 85.9 61 68.9
Actinidia39116 Actinidia chinensis HOM05D000842 ORTHO05D000650 4.5e-15 85.5 54 79.6
Hma1.2p1_0388F.1_g142260 Hydrangea macrophylla HOM05D000842 ORTHO05D000650 5.8e-15 85.1 54 77.8
Phvul.005G160200 Phaseolus vulgaris HOM05D000842 ORTHO05D000650 5.8e-15 85.1 61 68.9
DCAR_026382 Daucus carota HOM05D000842 ORTHO05D000650 7.6e-15 84.7 61 72.1
Prupe.3G051000 Prunus persica HOM05D000842 ORTHO05D000650 9.9e-15 84.3 61 68.9
RcHm_v2.0_Chr2g0146461 Rosa chinensis HOM05D000842 ORTHO05D000650 9.9e-15 84.3 57 71.9
Glyma.13G350800 Glycine max HOM05D000842 ORTHO05D000650 1.3e-14 84.0 61 67.2
Nn2g14738 Nelumbo nucifera HOM05D000842 ORTHO05D000650 1.3e-14 84.0 61 68.9
RcHm_v2.0_Chr2g0142861 Rosa chinensis HOM05D000842 ORTHO05D000650 1.3e-14 84.0 61 70.5
Dinv30387 Davidia involucrata HOM05D000842 ORTHO05D000650 1.7e-14 83.6 54 74.1
Glyma.15G023600 Glycine max HOM05D000842 ORTHO05D000650 1.7e-14 83.6 61 67.2
Rhsim12G0205300 Rhododendron simsii HOM05D000842 ORTHO05D000650 1.7e-14 83.6 54 75.9
TAR624G1368 Trochodendron aralioides HOM05D000842 ORTHO05D000650 1.7e-14 83.6 91 51.6
ECA234G1704 Erigeron canadensis HOM05D000842 ORTHO05D000650 2.9e-14 82.8 61 70.5
Gohir.A10G060900 Gossypium hirsutum HOM05D000842 ORTHO05D000650 3.8e-14 82.4 54 74.1
Hma1.2p1_0516F.1_g170560 Hydrangea macrophylla HOM05D000842 ORTHO05D000650 3.8e-14 82.4 56 69.6
HPP92_014257 Vanilla planifolia HOM05D000842 ORTHO05D000650 3.8e-14 82.4 115 46.1
CSS0002312 Camellia sinensis var. sinensis HOM05D000842 ORTHO05D000650 4.9e-14 82.0 53 75.5
CSS0040988 Camellia sinensis var. sinensis HOM05D000842 ORTHO05D000650 4.9e-14 82.0 53 75.5
CANSAT64G1462 Cannabis sativa HOM05D000842 ORTHO05D000650 4.9e-14 82.0 54 74.1
DCAR_007618 Daucus carota HOM05D000842 ORTHO05D000650 4.9e-14 82.0 54 74.1
HanXRQChr12g0360621 Helianthus annuus HOM05D000842 ORTHO05D000650 4.9e-14 82.0 54 77.8
Lalb_Chr22g0351761 Lupinus albus HOM05D000842 ORTHO05D000650 4.9e-14 82.0 54 75.9
TAR626G0918 Trochodendron aralioides HOM05D000842 ORTHO05D000650 4.9e-14 82.0 54 75.9
arahy.Tifrunner.gnm1.ann1.GZNN80 Arachis hypogaea HOM05D000842 ORTHO05D000650 6.4e-14 81.6 54 75.9
Cpa.g.sc25.65 Carica papaya HOM05D000842 ORTHO05D000650 6.4e-14 81.6 54 74.1
Lalb_Chr14g0372831 Lupinus albus HOM05D000842 ORTHO05D000650 6.4e-14 81.6 54 75.9
Manes.04G139000 Manihot esculenta HOM05D000842 ORTHO05D000650 6.4e-14 81.6 51 78.4
FAN02G3656 Fragaria x ananassa HOM05D000842 ORTHO05D000650 8.4e-14 81.3 61 68.9
Hma1.2p1_1116F.1_g258940 Hydrangea macrophylla HOM05D000842 ORTHO05D000650 8.4e-14 81.3 56 69.6
FAN14G1725 Fragaria x ananassa HOM05D000842 ORTHO05D000650 1.1e-13 80.9 69 62.3
MBI13_g00889_MAGBIO Magnolia biondii HOM05D000842 ORTHO05D000650 1.1e-13 80.9 56 71.4
QL05p014694 Quercus lobata HOM05D000842 ORTHO05D000650 1.1e-13 80.9 91 48.4
Ciclev10026255m.g Citrus clementina HOM05D000842 ORTHO05D000650 1.4e-13 80.5 52 76.9
vmacro16990 Vaccinium macrocarpon HOM05D000842 ORTHO05D000650 1.4e-13 80.5 55 76.4
vmacro22857 Vaccinium macrocarpon HOM05D000842 ORTHO05D000650 1.4e-13 80.5 55 76.4
MSTRG.22592 Avicennia marina HOM05D000842 ORTHO05D000650 1.9e-13 80.1 54 74.1
Cc04_g02040 Coffea canephora HOM05D000842 ORTHO05D000650 1.9e-13 80.1 89 50.6
Gohir.D10G062000 Gossypium hirsutum HOM05D000842 ORTHO05D000650 1.9e-13 80.1 54 70.4
Psat5g293360 Pisum sativum HOM05D000842 ORTHO05D000650 1.9e-13 80.1 56 69.6
TPR.G6562 Trifolium pratense HOM05D000842 ORTHO05D000650 1.9e-13 80.1 56 69.6
Aqoxy7G04070 Aquilegia oxysepala HOM05D000842 ORTHO05D000650 2.4e-13 79.7 87 48.3
arahy.Tifrunner.gnm1.ann1.22LF0C Arachis hypogaea HOM05D000842 ORTHO05D000650 2.4e-13 79.7 54 72.2
Medtr2g100240 Medicago truncatula HOM05D000842 ORTHO05D000650 2.4e-13 79.7 56 69.6
Glyma.01G128750 Glycine max HOM05D000842 ORTHO05D000650 3.2e-13 79.3 58 67.2
Sc12g0010200 Simmondsia chinensis HOM05D000842 ORTHO05D000650 3.2e-13 79.3 54 70.4
FvH4_6g33160 Fragaria vesca HOM05D000842 ORTHO05D000650 4.2e-13 79.0 61 67.2
FAN09G1652 Fragaria x ananassa HOM05D000842 ORTHO05D000650 4.2e-13 79.0 61 67.2
Gorai.011G066200 Gossypium raimondii HOM05D000842 ORTHO05D000650 4.2e-13 79.0 54 68.5
MD17G1175100 Malus domestica HOM05D000842 ORTHO05D000650 4.2e-13 79.0 61 67.2
SalBow6G4852 Salvia bowleyana HOM05D000842 ORTHO05D000650 4.2e-13 79.0 54 74.1
COL.COLO4_30649 Corchorus olitorius HOM05D000842 ORTHO05D000650 5.4e-13 78.6 52 73.1
SGA_v2.0_scaffold45G16978 Striga asiatica HOM05D000842 ORTHO05D000650 7.1e-13 78.2 54 70.4
Ca_01191_v3 Cicer arietinum L. HOM05D000842 ORTHO05D000650 9.3e-13 77.8 54 70.4
Manes.11G027300 Manihot esculenta HOM05D000842 ORTHO05D000650 1.2e-12 77.4 51 74.5
CiPaw.02G141000 Carya illinoinensis HOM05D000842 ORTHO05D000650 2.1e-12 76.6 54 66.7
CDE08G1357 Ceratophyllum demersum HOM05D000842 ORTHO05D000650 2.1e-12 76.6 53 67.9
Aa31LG10G960 Aethionema arabicum HOM05D000842 ORTHO05D000650 2.7e-12 76.3 52 69.2
Potri.003G037900 Populus trichocarpa HOM05D000842 ORTHO05D000650 2.7e-12 76.3 55 70.9
FAN05G2951 Fragaria x ananassa HOM05D000842 ORTHO05D000650 3.5e-12 75.9 60 66.7
AL1G63210 Arabidopsis lyrata HOM05D000842 ORTHO05D000650 4.6e-12 75.5 52 69.2
EL10Ac7g15775 Beta vulgaris HOM05D000842 ORTHO05D000650 4.6e-12 75.5 54 64.8
CiPaw.01G225800 Carya illinoinensis HOM05D000842 ORTHO05D000650 4.6e-12 75.5 54 72.2
Thhalv10011750m.g Eutrema salsugineum HOM05D000842 ORTHO05D000650 4.6e-12 75.5 70 58.6
Duzib160G0845 Durio zibethinus HOM05D000842 ORTHO05D000650 6.0e-12 75.1 54 66.7
Lj3g0025148 Lotus japonicus HOM05D000842 ORTHO05D000650 6.0e-12 75.1 54 66.7
Carub.0001s4367 Capsella rubella HOM05D000842 ORTHO05D000650 7.9e-12 74.7 52 69.2
AT1G55170 Arabidopsis thaliana HOM05D000842 ORTHO05D000650 1.3e-11 73.9 52 67.3
Peaxi162Scf00038g01435 Petunia axillaris HOM05D000842 ORTHO05D000650 1.3e-11 73.9 54 63.0
BcaB07g33230 Brassica carinata HOM05D000842 ORTHO05D000650 1.8e-11 73.6 52 67.3
Nitab4.5_0005281g0020 Nicotiana tabacum HOM05D000842 ORTHO05D000650 1.8e-11 73.6 54 66.7
Sp1g40840 Schrenkiella parvula HOM05D000842 ORTHO05D000650 1.8e-11 73.6 52 67.3
BcaC08g43611 Brassica carinata HOM05D000842 ORTHO05D000650 2.3e-11 73.2 52 67.3
A06p00370 Brassica napus HOM05D000842 ORTHO05D000650 2.3e-11 73.2 52 67.3
C06p10130 Brassica napus HOM05D000842 ORTHO05D000650 2.3e-11 73.2 52 67.3
BraA06t23252Z Brassica rapa HOM05D000842 ORTHO05D000650 2.3e-11 73.2 52 67.3
AUR62009811 Chenopodium quinoa HOM05D000842 ORTHO05D000650 2.3e-11 73.2 53 64.2
AUR62038123 Chenopodium quinoa HOM05D000842 ORTHO05D000650 2.3e-11 73.2 53 64.2
Solyc03g121500.3 Solanum lycopersicum HOM05D000842 ORTHO05D000650 2.3e-11 73.2 54 63.0
SGA_v2.0_scaffold71G23772 Striga asiatica HOM05D000842 ORTHO05D000650 2.3e-11 73.2 54 68.5
BcaB02g10841 Brassica carinata HOM05D000842 ORTHO05D000650 3.0e-11 72.8 96 44.8
CARHR044790 Cardamine hirsuta HOM05D000842 ORTHO05D000650 3.0e-11 72.8 87 44.8
Eucgr.J02870 Eucalyptus grandis HOM05D000842 ORTHO05D000650 3.0e-11 72.8 54 64.8
Lsat_1_v5_gn_1_36001 Lactuca sativa HOM05D000842 ORTHO05D000650 3.0e-11 72.8 54 63.0
Lsat_1_v5_gn_5_133560 Lactuca sativa HOM05D000842 ORTHO05D000650 3.0e-11 72.8 60 65.0
PGSC0003DMG400002502 Solanum tuberosum HOM05D000842 ORTHO05D000650 3.0e-11 72.8 54 61.1
SEGI_02504 Sequoiadendron giganteum HOM05D000842 ORTHO05D000650 3.9e-11 72.4 61 54.1
Sopen03g040310 Solanum pennellii HOM05D000842 ORTHO05D000650 3.9e-11 72.4 54 61.1
BolC6t36774H Brassica oleracea HOM05D000842 ORTHO05D000650 5.1e-11 72.0 52 65.4
Migut.D00973 Erythranthe guttata HOM05D000842 ORTHO05D000650 5.1e-11 72.0 54 66.7
CAN.G1389.8 Capsicum annuum HOM05D000842 ORTHO05D000650 6.7e-11 71.6 54 57.4
Nn6g35459 Nelumbo nucifera HOM05D000093 ORTHO05D000605 6.7e-11 71.6 50 74.0
Sabra03G0025600 Salix brachista HOM05D000842 ORTHO05D000650 6.7e-11 71.6 55 65.5
Ah.08g216140 Amaranthus hybridus HOM05D000842 ORTHO05D000650 8.7e-11 71.2 54 63.0
Nitab4.5_0004364g0040 Nicotiana tabacum HOM05D000250 ORTHO05D000650 1.9e-10 70.1 86 45.3
Ah.15g095600 Amaranthus hybridus HOM05D000842 ORTHO05D000650 2.5e-10 69.7 52 61.5
Hund20860 Selenicereus undatus HOM05D000842 ORTHO05D000650 2.5e-10 69.7 54 61.1
Sc15g0000100 Simmondsia chinensis HOM05D000842 ORTHO05D000650 3.3e-10 69.3 56 58.9
Atru.chr1.3678 Acer truncatum HOM05D000842 ORTHO05D000650 4.3e-10 68.9 50 70.0
SEGI_10988 Sequoiadendron giganteum HOM05D000842 ORTHO05D000650 7.4e-10 68.2 60 58.3
A05p17650 Brassica napus HOM05D000842 ORTHO05D000650 9.6e-10 67.8 52 61.5
BraA05t20657Z Brassica rapa HOM05D000842 ORTHO05D000650 9.6e-10 67.8 52 61.5
Haze_15940 Corylus avellana HOM05D000842 ORTHO05D000650 9.6e-10 67.8 46 69.6
AagrBONN_evm.TU.Sc2ySwM_228.3775 Anthoceros agrestis HOM05D000842 ORTHO05D000650 2.8e-09 66.2 50 68.0
Oeu002510.1 Olea europaea HOM05D000842 ORTHO05D000650 2.8e-09 66.2 50 64.0
ATR0121G006 Amborella trichopoda HOM05D000842 ORTHO05D000650 3.7e-09 65.9 53 62.3
unitig_32.g11576 Utricularia gibba HOM05D000842 ORTHO05D000650 3.7e-09 65.9 53 56.6
ATR0307G011 Amborella trichopoda HOM05D000842 ORTHO05D000650 4.8e-09 65.5 50 66.0
Aqoxy3G00304 Aquilegia oxysepala HOM05D000842 ORTHO05D000650 6.2e-09 65.1 74 50.0
Os12g0193100 Oryza sativa ssp. japonica HOM05D000842 ORTHO05D000650 1.1e-08 64.3 53 49.1
C06p15820 Brassica napus HOM05D000842 ORTHO05D000650 1.8e-08 63.5 45 64.4
HanXRQChr02g0031721 Helianthus annuus HOM05D000842 ORTHO05D000650 1.8e-08 63.5 98 39.8
ECA247G0769 Erigeron canadensis HOM05D000842 ORTHO05D000650 3.1e-08 62.8 51 60.8
PSO210G6240 Papaver somniferum HOM05D000842 ORTHO05D000650 4.0e-08 62.4 48 62.5
FvH4_3g17610 Fragaria vesca HOM05D000842 ORTHO05D000650 1.2e-07 60.8 58 51.7
FAN11G0959 Fragaria x ananassa HOM05D000842 ORTHO05D000650 1.2e-07 60.8 58 51.7
FAN16G3507 Fragaria x ananassa HOM05D000842 ORTHO05D000650 1.2e-07 60.8 58 51.7
FAN21G0331 Fragaria x ananassa HOM05D000842 ORTHO05D000650 1.2e-07 60.8 58 51.7
TAR629G1485 Trochodendron aralioides HOM05D000842 ORTHO05D000650 1.2e-07 60.8 93 36.6
Oeu034247.1 Olea europaea HOM05D000842 ORTHO05D000650 2.0e-07 60.1 83 42.2
GSVIVG01021318001 Vitis vinifera HOM05D000842 ORTHO05D000650 2.0e-07 60.1 60 50.0
Nn6g34387 Nelumbo nucifera HOM05D000842 ORTHO05D000650 2.6e-07 59.7 55 54.5
Nn3g17833 Nelumbo nucifera HOM05D000842 ORTHO05D000650 3.4e-07 59.3 43 69.8
Nn3g17835 Nelumbo nucifera HOM05D000842 ORTHO05D000650 3.4e-07 59.3 43 69.8
RcHm_v2.0_Chr5g0029311 Rosa chinensis HOM05D000842 ORTHO05D000650 3.4e-07 59.3 58 50.0
Gohir.D05G337400 Gossypium hirsutum HOM05D000842 ORTHO05D000650 4.5e-07 58.9 59 50.8
MBI03_g33624_MAGBIO Magnolia biondii HOM05D000842 ORTHO05D000650 4.5e-07 58.9 54 53.7
ATR0680G176 Amborella trichopoda HOM05D000842 ORTHO05D000650 5.8e-07 58.5 48 58.3
Cc11_g10160 Coffea canephora HOM05D000842 ORTHO05D000650 5.8e-07 58.5 78 42.3
COL.COLO4_03606 Corchorus olitorius HOM05D000842 ORTHO05D000650 5.8e-07 58.5 59 50.8
CsaV3_4G032790 Cucumis sativus L. HOM05D000842 ORTHO05D000650 5.8e-07 58.5 103 34.0
FAN25G0524 Fragaria x ananassa HOM05D000842 ORTHO05D000650 5.8e-07 58.5 58 50.0
Gorai.009G361700 Gossypium raimondii HOM05D000842 ORTHO05D000650 5.8e-07 58.5 59 49.2
Prupe.4G155500 Prunus persica HOM05D000842 ORTHO05D000650 5.8e-07 58.5 57 50.9
TAR383G0159 Trochodendron aralioides HOM05D000842 ORTHO05D000650 5.8e-07 58.5 109 32.1
QL08p024827 Quercus lobata HOM05D000842 ORTHO05D000650 7.6e-07 58.2 58 51.7
TAR627G1038 Trochodendron aralioides HOM05D000842 ORTHO05D000650 7.6e-07 58.2 57 50.9
Gohir.A04G045400 Gossypium hirsutum HOM05D000842 ORTHO05D000650 9.9e-07 57.8 59 49.2
TAR622G0105 Trochodendron aralioides HOM05D000842 ORTHO05D000650 9.9e-07 57.8 88 43.2
Cc05_g10630 Coffea canephora HOM05D000842 ORTHO05D000650 1.3e-06 57.4 58 50.0
Dinv21087 Davidia involucrata HOM05D000842 ORTHO05D000650 1.3e-06 57.4 50 58.0
Dinv42793 Davidia involucrata HOM05D000842 ORTHO05D000650 1.3e-06 57.4 109 29.4
Dinv43308 Davidia involucrata HOM05D000842 ORTHO05D000650 1.3e-06 57.4 109 29.4
MD03G1250800 Malus domestica HOM05D000842 ORTHO05D000650 1.3e-06 57.4 57 50.9
HPP92_026124 Vanilla planifolia HOM05D000842 ORTHO05D000650 1.3e-06 57.4 69 37.7
ClCG11G017130 Citrullus lanatus HOM05D000842 ORTHO05D000650 1.7e-06 57.0 59 49.2
MELO3C025674.2 Cucumis melo HOM05D000842 ORTHO05D000650 1.7e-06 57.0 59 49.2
Dinv31639 Davidia involucrata HOM05D000842 ORTHO05D000650 1.7e-06 57.0 50 56.0
Rhsim09G0108200 Rhododendron simsii HOM05D000842 ORTHO05D000650 1.7e-06 57.0 50 60.0
TAR371G0119 Trochodendron aralioides HOM05D000842 ORTHO05D000650 2.2e-06 56.6 50 54.0
Cfa019507 Carpinus fangiana HOM05D000842 ORTHO05D000650 2.9e-06 56.2 58 50.0
Haze_08444 Corylus avellana HOM05D000842 ORTHO05D000650 2.9e-06 56.2 58 50.0
Nn2g10984 Nelumbo nucifera HOM05D000842 ORTHO05D000650 2.9e-06 56.2 50 54.0
QL01p040006 Quercus lobata HOM05D000842 ORTHO05D000650 2.9e-06 56.2 54 44.4
MSTRG.13530 Avicennia marina HOM05D000842 ORTHO05D000650 3.8e-06 55.8 49 53.1
Migut.E00339 Erythranthe guttata HOM05D000842 ORTHO05D000650 3.8e-06 55.8 50 54.0
MD16G1043100 Malus domestica HOM05D000842 ORTHO05D000650 3.8e-06 55.8 88 38.6
SGA_v2.0_scaffold170G38759 Striga asiatica HOM05D000842 ORTHO05D000650 3.8e-06 55.8 59 45.8
CSS0037827 Camellia sinensis var. sinensis HOM05D000842 ORTHO05D000650 4.9e-06 55.5 58 46.6
Lj3g0009813 Lotus japonicus HOM05D000842 ORTHO05D000650 4.9e-06 55.5 106 31.1
MD11G1271000 Malus domestica HOM05D000842 ORTHO05D000650 4.9e-06 55.5 55 50.9
TAR633G2814 Trochodendron aralioides HOM05D000842 ORTHO05D000650 4.9e-06 55.5 50 54.0
CBR_g3067 Chara braunii HOM05D000842 ORTHO05D000650 6.4e-06 55.1 65 46.2
AUR62002868 Chenopodium quinoa HOM05D000842 ORTHO05D000650 6.4e-06 55.1 59 47.5
AUR62035222 Chenopodium quinoa HOM05D000842 ORTHO05D000650 6.4e-06 55.1 50 52.0
ClCG08G005330 Citrullus lanatus HOM05D000842 ORTHO05D000650 6.4e-06 55.1 43 65.1
MELO3C011573.2 Cucumis melo HOM05D000842 ORTHO05D000650 6.4e-06 55.1 43 65.1
Zm00001eb164030 Zea mays HOM05D000842 ORTHO05D000650 6.4e-06 55.1 46 54.3
Hma1.2p1_0061F.1_g033940 Hydrangea macrophylla HOM05D000842 ORTHO05D000650 8.4e-06 54.7 78 39.7
PGR031G0859 Punica granatum HOM05D000842 ORTHO05D000650 8.4e-06 54.7 58 43.1
Sed0000394 Sechium edule HOM05D000842 ORTHO05D000650 8.4e-06 54.7 43 62.8


User provided reference genes

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