Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 3.6e-239 831.2 445 100.0
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 3.7e-183 645.2 443 71.8
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 4.1e-182 641.7 447 71.1
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 1.2e-181 640.2 447 70.9
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 5.0e-180 634.8 443 70.2
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 6.1e-178 627.9 446 77.1
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 4.4e-176 621.7 443 70.4
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 9.7e-176 620.5 445 76.2
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 3.7e-175 618.6 446 76.9
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 1.8e-174 616.3 444 73.6
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 7.0e-174 614.4 442 69.0
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 2.0e-173 612.8 450 68.2
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 9.4e-171 604.0 453 66.9
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 9.4e-171 604.0 457 74.6
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 1.0e-169 600.5 446 68.4
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 1.8e-169 599.7 443 67.0
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.3e-167 593.6 447 66.2
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 2.8e-167 592.4 445 72.1
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 1.1e-166 590.5 447 72.3
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 1.8e-166 589.7 447 74.3
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 4.1e-166 588.6 443 71.3
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 9.1e-166 587.4 447 65.5
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.7e-165 585.9 447 65.3
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 3.5e-165 585.5 445 64.5
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 4.5e-165 585.1 447 65.1
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 7.7e-165 584.3 443 72.2
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 1.7e-164 583.2 451 67.0
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 3.8e-164 582.0 453 72.0
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 1.5e-163 580.1 445 70.1
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 9.4e-163 577.4 445 65.2
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 6.1e-162 574.7 443 64.6
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 1.8e-161 573.2 443 73.4
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 7.5e-160 567.8 446 63.0
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 1.7e-159 566.6 444 64.4
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 3.7e-159 565.5 465 68.4
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 1.1e-158 563.9 445 62.7
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 1.8e-158 563.1 462 67.1
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 2.4e-158 562.8 447 65.3
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 2.4e-158 562.8 451 62.7
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 9.1e-158 560.8 455 69.0
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 2.9e-156 555.8 445 64.7
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 6.6e-156 554.7 446 62.1
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 2.8e-154 549.3 446 61.7
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 2.3e-153 546.2 445 63.1
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 5.7e-152 541.6 452 60.8
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 2.2e-151 539.7 447 65.5
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 8.3e-151 537.7 445 61.3
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 4.1e-150 535.4 417 67.6
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 5.4e-150 535.0 450 61.8
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.2e-149 533.9 304 83.6
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 4.5e-149 531.9 456 61.2
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 4.5e-149 531.9 450 63.1
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 7.8e-149 531.2 443 67.0
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 1.7e-148 530.0 451 61.2
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 3.9e-148 528.9 461 59.7
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 1.1e-147 527.3 456 60.7
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 3.3e-147 525.8 453 60.7
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 4.3e-147 525.4 300 81.0
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 5.6e-147 525.0 455 64.6
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 2.8e-146 522.7 456 63.4
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 1.0e-145 520.8 443 70.0
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 3.1e-145 519.2 481 61.3
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 2.6e-144 516.2 445 60.7
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 4.4e-144 515.4 445 59.1
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 5.8e-144 515.0 454 57.5
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 5.8e-144 515.0 453 61.8
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 9.8e-144 514.2 443 60.0
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 1.7e-143 513.5 444 64.0
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 2.2e-143 513.1 459 58.8
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 6.4e-143 511.5 445 65.4
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 4.1e-142 508.8 445 64.3
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 9.2e-142 507.7 449 59.5
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 2.0e-141 506.5 446 59.0
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 2.7e-141 506.1 451 57.0
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 1.3e-140 503.8 476 60.9
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 1.1e-139 500.7 449 62.4
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 2.5e-139 499.6 421 60.3
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 3.3e-139 499.2 387 72.9
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 1.2e-138 497.3 442 57.9
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 4.0e-137 492.3 478 58.4
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 2.6e-136 489.6 301 74.8
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 5.8e-136 488.4 303 75.2
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 9.8e-136 487.6 418 63.2
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 4.9e-135 485.3 303 71.6
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 3.2e-134 482.6 447 62.6
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 4.1e-134 482.3 445 60.2
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 9.2e-134 481.1 448 57.6
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 5.6e-131 471.9 371 72.2
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 1.8e-129 466.8 512 49.4
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 5.2e-121 438.7 293 70.6
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 7.1e-118 428.3 445 52.1
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 9.0e-113 411.4 351 70.7
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 2.0e-112 410.2 232 82.8
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 1.4e-110 404.1 454 48.7
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 7.1e-110 401.7 301 62.5
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 7.1e-110 401.7 301 62.5
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 3.0e-108 396.4 218 83.9
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 5.1e-108 395.6 301 63.1
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 4.3e-107 392.5 301 61.1
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 7.3e-107 391.7 266 67.7
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 3.6e-106 389.4 298 63.4
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.4e-105 387.5 344 58.1
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 9.3e-102 374.8 367 55.0
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 2.7e-101 373.2 307 58.0
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 1.3e-100 370.9 361 61.5
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 1.7e-87 327.4 201 75.1
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 6.3e-74 282.3 208 62.0
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 6.3e-74 282.3 208 62.0
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 9.4e-70 268.5 267 48.7
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 1.4e-68 264.6 202 64.9
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 7.0e-65 252.3 278 42.4
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 5.7e-59 232.6 118 89.0
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 1.8e-49 201.1 196 50.0
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 1.6e-45 188.0 259 45.9
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 1.0e-39 168.7 134 57.5
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 4.0e-36 156.8 115 65.2
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.3e-31 141.7 68 94.1
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 1.2e-29 135.2 80 72.5
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 1.3e-26 125.2 101 55.4
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 1.9e-22 111.3 68 75.0
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 7.3e-22 109.4 76 64.5
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 2.7e-16 90.9 52 75.0
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 9.5e-14 82.4 75 53.3
Atru.chr9.1146 Acer truncatum HOM05D006116 ORTHO05D007795 1.2e-13 82.0 104 48.1
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 4.4e-11 73.6 120 31.7
CiPaw.12G058200 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.1e-09 68.9 92 47.8
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.0e-07 62.4 59 44.1
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 9.6e-06 55.8 39 61.5


User provided reference genes

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