Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 5.0e-121 438.0 247 100.0
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 3.7e-76 288.9 207 73.9
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 7.8e-74 281.2 207 79.2
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 7.3e-72 274.6 229 68.1
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 2.1e-71 273.1 212 69.3
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 3.6e-71 272.3 160 81.9
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 1.0e-70 270.8 160 82.5
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 1.8e-70 270.0 211 67.8
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 2.3e-70 269.6 168 77.4
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 2.3e-70 269.6 218 72.0
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 4.0e-70 268.9 210 67.6
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 5.2e-70 268.5 164 79.9
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 6.8e-70 268.1 161 80.7
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 1.5e-69 266.9 160 81.9
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 1.5e-69 266.9 210 65.2
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 5.8e-69 265.0 165 79.4
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 5.8e-69 265.0 208 64.9
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 1.3e-68 263.8 166 78.3
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 2.2e-68 263.1 156 80.1
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 2.9e-68 262.7 212 65.1
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 4.9e-68 261.9 168 75.0
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 8.3e-68 261.2 165 78.8
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 1.4e-67 260.4 208 65.4
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 2.4e-67 259.6 159 79.2
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 7.0e-67 258.1 185 71.9
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 7.0e-67 258.1 212 64.2
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 9.2e-67 257.7 158 79.7
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 6.0e-66 255.0 210 64.8
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 3.9e-65 252.3 211 64.0
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 2.5e-64 249.6 215 62.8
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 7.3e-64 248.1 212 60.8
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 7.3e-64 248.1 176 71.6
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 1.2e-63 247.3 168 69.0
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 2.8e-63 246.1 210 68.1
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 4.7e-63 245.4 210 67.1
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 8.1e-63 244.6 162 74.1
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 2.3e-62 243.0 218 60.1
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 2.3e-62 243.0 153 77.1
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 3.1e-62 242.7 210 61.4
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 2.0e-61 240.0 242 54.5
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 2.0e-61 240.0 164 72.0
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 2.6e-61 239.6 167 72.5
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 5.8e-61 238.4 160 71.9
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 7.5e-61 238.0 167 71.9
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 7.5e-61 238.0 160 72.5
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 9.8e-61 237.7 155 74.2
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 1.3e-60 237.3 164 73.2
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 2.9e-60 236.1 153 75.2
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 3.7e-60 235.7 220 59.1
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 3.7e-60 235.7 186 62.9
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 4.9e-60 235.3 164 70.7
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 4.9e-60 235.3 164 70.7
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 6.4e-60 235.0 160 72.5
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 8.3e-60 234.6 220 58.6
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 1.1e-59 234.2 156 74.4
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 1.1e-59 234.2 164 70.1
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.1e-59 234.2 221 61.5
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 7.1e-59 231.5 160 68.1
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 7.1e-59 231.5 160 70.0
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 9.2e-59 231.1 160 69.4
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 1.2e-58 230.7 146 76.0
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 3.5e-58 229.2 158 70.9
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 4.6e-58 228.8 192 59.4
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 7.8e-58 228.0 160 69.4
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 7.8e-58 228.0 160 68.8
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 7.8e-58 228.0 159 71.7
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 1.0e-57 227.6 155 72.3
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 1.3e-57 227.3 158 70.9
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 1.3e-57 227.3 153 72.5
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 1.7e-57 226.9 164 70.1
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 1.7e-57 226.9 199 60.8
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 4.3e-56 222.2 159 69.8
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 2.1e-55 219.9 162 65.4
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 2.8e-55 219.5 162 65.4
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 1.4e-54 217.2 148 74.3
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 2.3e-54 216.5 207 57.5
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 3.1e-54 216.1 162 64.2
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 3.1e-54 216.1 162 64.8
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 5.2e-54 215.3 162 65.4
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 5.8e-53 211.8 160 65.6
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 3.7e-52 209.1 192 54.7
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 4.9e-52 208.8 166 64.5
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 8.4e-52 208.0 166 64.5
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 4.6e-50 202.2 166 60.8
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 1.0e-49 201.1 206 55.3
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 5.1e-49 198.7 172 59.9
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 5.1e-49 198.7 172 59.9
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 1.1e-48 197.6 155 64.5
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 9.6e-48 194.5 207 56.5
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 1.6e-47 193.7 162 60.5
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 3.6e-47 192.6 286 46.5
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 2.4e-46 189.9 162 58.0
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 2.9e-44 183.0 120 73.3
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 3.8e-44 182.6 168 57.7
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 2.4e-43 179.9 168 56.0
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 4.2e-43 179.1 164 59.1
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 1.2e-42 177.6 159 57.2
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 5.6e-40 168.7 184 51.1
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 1.4e-38 164.1 158 51.9
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 2.4e-38 163.3 162 53.1
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 2.4e-38 163.3 162 53.1
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 2.4e-38 163.3 162 53.1
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 6.9e-38 161.8 120 68.3
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 9.0e-38 161.4 120 69.2
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 2.2e-36 156.8 114 71.1
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 4.2e-35 152.5 213 46.5
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 1.6e-34 150.6 157 54.1
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 1.6e-34 150.6 157 54.1
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 5.6e-32 142.1 171 48.5
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 9.0e-30 134.8 88 76.1
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 2.9e-28 129.8 80 78.8
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 1.1e-27 127.9 122 58.2
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 1.2e-26 124.4 122 56.6
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 9.6e-24 114.8 76 75.0
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 3.2e-19 99.8 72 66.7
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.3e-15 87.8 210 35.7
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 1.6e-15 87.4 173 36.4
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 2.1e-15 87.0 51 72.5
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 2.8e-15 86.7 217 32.3
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 2.4e-14 83.6 219 30.6
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 6.9e-14 82.0 57 70.2
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 1.2e-13 81.3 45 77.8
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 2.9e-12 76.6 53 69.8
SMO347G0210 Selaginella moellendorffii HOM05D005771 ORTHO05D007173 7.9e-10 68.6 216 27.3
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 1.0e-09 68.2 200 28.0
Nn1g00689 Nelumbo nucifera HOM05D005771 ORTHO05D007173 6.3e-07 58.9 54 61.1


User provided reference genes

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