Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 7.7e-53 210.3 113 100.0
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 8.8e-41 170.2 106 82.1
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 9.8e-40 166.8 113 80.5
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 9.8e-40 166.8 113 80.5
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 1.8e-38 162.5 110 78.2
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 4.1e-38 161.4 110 77.3
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 9.1e-38 160.2 110 76.4
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 7.7e-37 157.1 108 78.7
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 1.0e-36 156.8 110 78.2
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 2.2e-36 155.6 110 78.2
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 6.5e-36 154.1 110 74.5
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 8.5e-36 153.7 104 77.9
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 8.5e-36 153.7 108 75.0
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 1.1e-35 153.3 109 74.3
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 2.1e-34 149.1 113 77.0
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 2.8e-34 148.7 111 72.1
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 2.8e-34 148.7 107 72.9
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 4.7e-34 147.9 109 73.4
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 4.7e-34 147.9 107 73.8
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 1.0e-33 146.7 110 71.8
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 2.3e-33 145.6 110 71.8
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 3.0e-33 145.2 107 74.8
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 6.8e-33 144.1 107 72.0
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 8.8e-33 143.7 110 69.1
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 8.8e-33 143.7 105 76.2
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.5e-32 142.9 115 70.4
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.5e-32 142.9 115 70.4
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 2.6e-32 142.1 105 73.3
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 2.6e-32 142.1 96 77.1
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 3.4e-32 141.7 103 72.8
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 4.4e-32 141.4 115 69.6
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 5.7e-32 141.0 141 58.9
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 7.5e-32 140.6 108 72.2
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 9.8e-32 140.2 103 74.8
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.3e-31 139.8 110 66.4
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.3e-31 139.8 110 66.4
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 1.7e-31 139.4 109 68.8
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 1.7e-31 139.4 94 76.6
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 2.2e-31 139.0 104 73.1
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 2.8e-31 138.7 112 66.1
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 3.7e-31 138.3 107 70.1
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 6.3e-31 137.5 108 72.2
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 6.3e-31 137.5 101 72.3
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 6.3e-31 137.5 114 69.3
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 1.1e-30 136.7 108 71.3
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 1.4e-30 136.3 110 64.5
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 1.8e-30 136.0 112 65.2
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 3.1e-30 135.2 103 68.9
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 4.1e-30 134.8 109 69.7
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 7.0e-30 134.0 108 67.6
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 1.2e-29 133.3 111 67.6
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 1.3e-28 129.8 109 66.1
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 1.7e-28 129.4 103 67.0
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 2.3e-28 129.0 101 71.3
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 2.9e-28 128.6 111 63.1
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 1.5e-27 126.3 111 62.2
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 3.3e-27 125.2 100 65.0
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 7.3e-27 124.0 106 66.0
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 3.6e-26 121.7 145 54.5
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 6.1e-26 120.9 89 74.2
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 8.0e-26 120.6 131 56.5
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 1.4e-25 119.8 85 74.1
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 1.8e-25 119.4 105 59.0
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 1.8e-25 119.4 100 64.0
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 2.3e-25 119.0 97 64.9
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 3.0e-25 118.6 97 68.0
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 4.0e-25 118.2 97 67.0
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 5.2e-25 117.9 97 68.0
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 5.2e-25 117.9 97 68.0
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 5.2e-25 117.9 97 68.0
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 5.2e-25 117.9 97 68.0
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 5.2e-25 117.9 97 68.0
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 5.2e-25 117.9 135 51.9
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 8.9e-25 117.1 97 67.0
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 1.2e-24 116.7 113 61.9
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 2.0e-24 115.9 97 67.0
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 2.0e-24 115.9 97 64.9
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 2.0e-24 115.9 101 61.4
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 3.4e-24 115.2 101 65.3
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 3.4e-24 115.2 103 61.2
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 9.8e-24 113.6 81 76.5
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 2.9e-23 112.1 107 61.7
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 6.4e-23 110.9 92 66.3
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 8.3e-23 110.5 134 52.2
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 4.1e-22 108.2 113 56.6
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 4.1e-22 108.2 105 58.1
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 9.2e-22 107.1 67 80.6
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 1.2e-21 106.7 75 74.7
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.0e-20 103.6 79 69.6
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 8.6e-20 100.5 84 61.9
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 8.6e-20 100.5 69 72.5
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 1.1e-19 100.1 111 53.2
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 3.3e-19 98.6 78 69.2
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 2.8e-18 95.5 83 61.4
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 2.8e-18 95.5 79 62.0
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 4.7e-18 94.7 69 71.0
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 4.7e-18 94.7 75 64.0
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 6.2e-18 94.4 86 60.5
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 8.0e-18 94.0 79 59.5
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 2.3e-17 92.4 74 66.2
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 3.1e-17 92.0 63 71.4
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 3.9e-12 75.1 43 88.4
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 5.0e-12 74.7 50 80.0
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 1.1e-11 73.6 97 54.6
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 1.1e-11 73.6 97 54.6
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 3.3e-11 72.0 65 60.0
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 7.3e-11 70.9 63 66.7
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 6.2e-10 67.8 41 80.5
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 1.4e-09 66.6 47 66.0
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 3.1e-09 65.5 115 40.0
Mapoly0009s0146 Marchantia polymorpha HOM05D006869 ORTHO05D008641 7.5e-08 60.8 84 44.0
Zm00001eb390630 Zea mays HOM05D006869 ORTHO05D008641 7.1e-06 54.3 46 63.0


User provided reference genes

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