Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 3.3e-172 608.2 290 100.0
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 8.1e-139 497.3 289 81.7
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 2.4e-135 485.7 291 79.0
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 2.1e-134 482.6 291 79.7
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 1.0e-133 480.3 288 78.1
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 2.3e-133 479.2 288 78.1
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 8.7e-133 477.2 304 75.7
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 8.7e-133 477.2 291 78.0
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 1.1e-132 476.9 290 75.5
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 1.5e-132 476.5 290 77.6
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 2.5e-132 475.7 291 76.3
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 5.6e-132 474.6 291 76.6
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 7.3e-132 474.2 291 77.7
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 8.1e-131 470.7 291 76.6
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.1e-130 470.3 291 77.7
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 1.1e-130 470.3 291 77.7
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 9.0e-130 467.2 290 75.5
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 1.3e-128 463.4 291 74.2
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 2.2e-128 462.6 291 75.3
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 8.4e-128 460.7 289 74.0
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 3.2e-127 458.8 291 74.2
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 9.3e-127 457.2 291 73.9
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 3.5e-126 455.3 321 67.3
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 4.6e-126 454.9 291 74.6
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 7.9e-126 454.1 291 74.6
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 1.5e-124 449.9 290 74.1
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 2.5e-124 449.1 291 73.2
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 7.4e-124 447.6 289 72.7
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 9.6e-124 447.2 292 73.3
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 1.1e-122 443.7 287 73.5
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 4.0e-122 441.8 290 71.0
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 4.0e-122 441.8 291 72.2
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 2.9e-120 435.6 287 70.7
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 3.8e-120 435.3 290 72.1
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 1.1e-119 433.7 290 71.7
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 1.4e-119 433.3 288 70.8
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 1.4e-119 433.3 290 70.3
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 4.2e-119 431.8 289 72.3
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 1.2e-118 430.3 289 69.9
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 2.1e-118 429.5 290 70.3
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 2.7e-118 429.1 289 70.6
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 1.0e-117 427.2 291 70.8
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 1.0e-117 427.2 290 71.0
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 1.3e-117 426.8 289 68.9
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 2.3e-117 426.0 290 67.9
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 8.7e-117 424.1 289 70.2
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 1.1e-116 423.7 290 69.0
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 1.9e-116 422.9 287 69.0
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 4.3e-116 421.8 289 69.9
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 7.4e-116 421.0 290 70.7
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 2.8e-115 419.1 280 68.9
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 4.8e-115 418.3 292 70.9
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 6.2e-115 417.9 289 67.5
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 8.1e-115 417.5 286 68.9
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 1.1e-114 417.2 290 70.0
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 1.1e-114 417.2 287 67.9
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 4.0e-114 415.2 288 67.4
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 6.9e-114 414.5 290 67.9
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 9.0e-114 414.1 317 63.4
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.5e-113 413.3 290 69.3
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 1.0e-112 410.6 289 68.2
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 5.5e-111 404.8 290 66.6
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 9.3e-111 404.1 315 64.4
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 2.1e-110 402.9 407 54.1
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 4.6e-110 401.7 290 66.2
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 6.0e-110 401.4 280 67.9
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 7.9e-110 401.0 286 66.4
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 7.9e-110 401.0 253 76.7
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 1.3e-109 400.2 289 65.1
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 3.0e-109 399.1 308 64.0
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 8.7e-109 397.5 320 63.1
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 1.1e-108 397.1 292 64.7
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 1.1e-108 397.1 290 65.9
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 1.9e-108 396.4 290 64.1
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 1.9e-108 396.4 290 64.1
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 1.9e-108 396.4 290 64.5
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 3.3e-108 395.6 285 65.6
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 3.7e-107 392.1 284 65.1
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 4.8e-107 391.7 286 65.0
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 1.1e-106 390.6 290 63.4
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 3.1e-106 389.0 291 64.3
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 4.1e-106 388.7 289 65.1
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 2.0e-105 386.3 430 50.9
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 2.6e-105 386.0 290 62.8
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 3.4e-105 385.6 288 63.5
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 4.5e-105 385.2 290 62.4
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 4.5e-105 385.2 288 63.5
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 8.5e-104 380.9 293 62.5
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 1.2e-102 377.1 290 63.1
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 1.6e-102 376.7 288 60.4
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 2.1e-102 376.3 278 64.4
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 1.0e-96 357.5 288 59.7
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 3.8e-96 355.5 280 61.8
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 1.9e-95 353.2 279 59.9
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 2.6e-92 342.8 290 57.6
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 3.7e-91 339.0 290 59.7
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 1.1e-90 337.4 289 56.7
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 2.5e-87 326.2 290 55.5
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 1.3e-83 313.9 213 73.2
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 3.7e-75 285.8 287 48.4
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 5.0e-72 275.4 181 70.2
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 4.2e-71 272.3 297 46.5
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 3.4e-68 262.7 150 81.3
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 2.1e-62 243.4 290 43.1
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 2.1e-54 216.9 287 40.8
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 4.4e-52 209.1 257 42.0
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 4.1e-42 176.0 108 78.7
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 1.2e-38 164.5 87 77.0
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 1.2e-33 147.9 108 64.8
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 9.0e-13 78.6 70 60.0
Cre09.g398150 Chlamydomonas reinhardtii HOM05D007134 ORTHO05D009004 2.8e-06 57.0 88 36.4


User provided reference genes

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