Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013111001 Vitis vinifera HOM05D004497 ORTHO05D005539 7.9e-228 793.5 422 100.0
RcHm_v2.0_Chr7g0190661 Rosa chinensis HOM05D004497 ORTHO05D005539 9.9e-170 600.5 359 79.7
Cfa013402 Carpinus fangiana HOM05D004497 ORTHO05D005539 5.4e-168 594.7 389 74.3
Haze_07247 Corylus avellana HOM05D004497 ORTHO05D005539 5.4e-168 594.7 358 79.1
FvH4_5g07760 Fragaria vesca HOM05D004497 ORTHO05D005539 2.5e-165 585.9 385 74.3
FAN18G2816 Fragaria x ananassa HOM05D004497 ORTHO05D005539 5.6e-165 584.7 385 74.0
Thecc.03G125300 Theobroma cacao HOM05D004497 ORTHO05D005539 2.8e-164 582.4 387 73.4
COL.COLO4_28066 Corchorus olitorius HOM05D004497 ORTHO05D005539 1.4e-163 580.1 381 73.2
FAN08G0052 Fragaria x ananassa HOM05D004497 ORTHO05D005539 1.4e-163 580.1 385 73.5
CiPaw.08G116800 Carya illinoinensis HOM05D004497 ORTHO05D005539 5.2e-163 578.2 389 72.8
FAN04G2053 Fragaria x ananassa HOM05D004497 ORTHO05D005539 9.0e-163 577.4 385 73.2
TAR625G0069 Trochodendron aralioides HOM05D004497 ORTHO05D005539 9.0e-163 577.4 378 74.6
CSS0032894 Camellia sinensis var. sinensis HOM05D004497 ORTHO05D005539 1.2e-162 577.0 379 75.2
Duzib205G0501 Durio zibethinus HOM05D004497 ORTHO05D005539 5.8e-162 574.7 387 72.1
TAR629G1275 Trochodendron aralioides HOM05D004497 ORTHO05D005539 5.8e-162 574.7 388 72.7
QL10p004476 Quercus lobata HOM05D004497 ORTHO05D005539 7.6e-162 574.3 390 72.6
QL04p081834 Quercus lobata HOM05D004497 ORTHO05D005539 2.2e-161 572.8 394 72.1
QL93p0225_0015 Quercus lobata HOM05D004497 ORTHO05D005539 2.9e-161 572.4 390 71.8
QL07p000007 Quercus lobata HOM05D004497 ORTHO05D005539 3.8e-161 572.0 390 71.8
Actinidia25597 Actinidia chinensis HOM05D004497 ORTHO05D005539 8.4e-161 570.9 390 71.5
TWI14G0260 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 4.2e-160 568.5 387 71.1
Potri.015G092400 Populus trichocarpa HOM05D004497 ORTHO05D005539 2.1e-159 566.2 388 70.9
Sabra15G0114200 Salix brachista HOM05D004497 ORTHO05D005539 2.1e-159 566.2 381 71.7
MD14G1161100 Malus domestica HOM05D004497 ORTHO05D005539 3.5e-159 565.5 391 72.1
Ciclev10020238m.g Citrus clementina HOM05D004497 ORTHO05D005539 1.7e-158 563.1 380 72.6
Rhsim08G0187300 Rhododendron simsii HOM05D004497 ORTHO05D005539 1.7e-158 563.1 437 65.2
Atru.chr3.3406 Acer truncatum HOM05D004497 ORTHO05D005539 2.3e-158 562.8 377 72.9
CsaV3_1G009480 Cucumis sativus L. HOM05D004497 ORTHO05D005539 5.1e-158 561.6 382 71.7
HanXRQChr05g0153981 Helianthus annuus HOM05D004497 ORTHO05D005539 8.7e-158 560.8 382 71.2
Nn4g26409 Nelumbo nucifera HOM05D004497 ORTHO05D005539 3.3e-157 558.9 383 71.8
Gohir.A09G246200 Gossypium hirsutum HOM05D004497 ORTHO05D005539 5.6e-157 558.1 381 71.1
Gohir.D09G246800 Gossypium hirsutum HOM05D004497 ORTHO05D005539 3.6e-156 555.4 381 70.6
Potri.012G095100 Populus trichocarpa HOM05D004497 ORTHO05D005539 3.6e-156 555.4 381 71.7
MD06G1147200 Malus domestica HOM05D004497 ORTHO05D005539 6.2e-156 554.7 369 73.2
Lsat_1_v5_gn_5_13520 Lactuca sativa HOM05D004497 ORTHO05D005539 1.4e-155 553.5 381 71.1
ClCG03G003620 Citrullus lanatus HOM05D004497 ORTHO05D005539 4.0e-155 552.0 361 74.0
Gorai.006G271300 Gossypium raimondii HOM05D004497 ORTHO05D005539 6.9e-155 551.2 381 70.9
Dinv11148 Davidia involucrata HOM05D004497 ORTHO05D005539 2.0e-154 549.7 353 76.5
Gohir.A12G276900 Gossypium hirsutum HOM05D004497 ORTHO05D005539 2.6e-154 549.3 359 73.8
CANSAT56G3508 Cannabis sativa HOM05D004497 ORTHO05D005539 3.4e-154 548.9 387 71.1
Nitab4.5_0002978g0150 Nicotiana tabacum HOM05D004497 ORTHO05D005539 1.7e-153 546.6 378 70.6
ECA246G4485 Erigeron canadensis HOM05D004497 ORTHO05D005539 4.9e-153 545.0 390 67.7
vmacro20468 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 6.4e-153 544.7 370 71.6
Lj9A476T57 Lonicera japonica HOM05D004497 ORTHO05D005539 8.4e-153 544.3 340 76.8
FAN13G1359 Fragaria x ananassa HOM05D004497 ORTHO05D005539 1.9e-152 543.1 392 68.4
Lj1g0020744 Lotus japonicus HOM05D004497 ORTHO05D005539 1.9e-152 543.1 388 68.3
Lalb_Chr03g0040831 Lupinus albus HOM05D004497 ORTHO05D005539 1.9e-152 543.1 380 66.8
Nitab4.5_0000903g0080 Nicotiana tabacum HOM05D004497 ORTHO05D005539 5.4e-152 541.6 374 70.9
Hund03342 Selenicereus undatus HOM05D004497 ORTHO05D005539 3.5e-151 538.9 373 69.7
Sed0020059 Sechium edule HOM05D004497 ORTHO05D005539 4.6e-151 538.5 378 69.3
Eucgr.C01065 Eucalyptus grandis HOM05D004497 ORTHO05D005539 7.9e-151 537.7 391 66.5
Manes.14G053800 Manihot esculenta HOM05D004497 ORTHO05D005539 6.7e-150 534.6 339 75.8
MELO3C002347.2 Cucumis melo HOM05D004497 ORTHO05D005539 1.1e-149 533.9 340 74.7
Ca_09070_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 1.5e-149 533.5 376 68.4
Sc10g0010400 Simmondsia chinensis HOM05D004497 ORTHO05D005539 1.5e-149 533.5 358 70.7
PGR083G2085 Punica granatum HOM05D004497 ORTHO05D005539 1.9e-149 533.1 390 68.2
TPR.G34454 Trifolium pratense HOM05D004497 ORTHO05D005539 3.3e-149 532.3 379 67.0
EL10As4g23444 Beta vulgaris HOM05D004497 ORTHO05D005539 9.6e-149 530.8 384 67.7
Eucgr.K00186 Eucalyptus grandis HOM05D004497 ORTHO05D005539 1.6e-148 530.0 391 65.2
Ca_04603_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 6.2e-148 528.1 388 66.2
Aqoxy5G03475 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 8.1e-148 527.7 380 67.4
Psat3g028160 Pisum sativum HOM05D004497 ORTHO05D005539 8.1e-148 527.7 388 66.0
Glyma.16G034400 Glycine max HOM05D004497 ORTHO05D005539 1.1e-147 527.3 382 67.5
PGSC0003DMG400005828 Solanum tuberosum HOM05D004497 ORTHO05D005539 5.3e-147 525.0 377 67.9
Dinv04858 Davidia involucrata HOM05D004497 ORTHO05D005539 6.9e-147 524.6 321 79.1
Medtr7g106650 Medicago truncatula HOM05D004497 ORTHO05D005539 1.5e-146 523.5 388 64.4
Migut.I00519 Erythranthe guttata HOM05D004497 ORTHO05D005539 4.5e-146 521.9 373 69.7
MBI11_g15865_MAGBIO Magnolia biondii HOM05D004497 ORTHO05D005539 9.9e-146 520.8 383 66.1
Sopen08g004010 Solanum pennellii HOM05D004497 ORTHO05D005539 1.7e-145 520.0 368 68.8
Solyc08g008160.4 Solanum lycopersicum HOM05D004497 ORTHO05D005539 2.2e-145 519.6 381 66.7
Ah.08g212900 Amaranthus hybridus HOM05D004497 ORTHO05D005539 4.9e-145 518.5 384 66.7
arahy.Tifrunner.gnm1.ann1.0L2FVX Arachis hypogaea HOM05D004497 ORTHO05D005539 1.1e-144 517.3 376 67.8
arahy.Tifrunner.gnm1.ann1.16KDXT Arachis hypogaea HOM05D004497 ORTHO05D005539 2.4e-144 516.2 376 67.6
Glyma.07G068400 Glycine max HOM05D004497 ORTHO05D005539 3.2e-144 515.8 355 69.9
SGA_v2.0_scaffold215G42316 Striga asiatica HOM05D004497 ORTHO05D005539 4.6e-143 511.9 382 66.2
PSO782G0077 Papaver somniferum HOM05D004497 ORTHO05D005539 1.8e-142 510.0 385 67.0
PSO063G4711 Papaver somniferum HOM05D004497 ORTHO05D005539 2.3e-142 509.6 385 67.0
Peaxi162Scf00078g00424 Petunia axillaris HOM05D004497 ORTHO05D005539 2.3e-142 509.6 339 71.1
VMungo0331G1674 Vigna mungo HOM05D004497 ORTHO05D005539 1.5e-141 506.9 380 64.2
Phvul.003G017500 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 3.3e-141 505.8 362 66.6
MSTRG.22910 Avicennia marina HOM05D004497 ORTHO05D005539 1.3e-140 503.8 382 66.0
Oeu005018.3 Olea europaea HOM05D004497 ORTHO05D005539 3.7e-140 502.3 404 62.9
SalBow8G1477 Salvia bowleyana HOM05D004497 ORTHO05D005539 8.2e-140 501.1 379 66.0
THA.LOC104820611 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 4.0e-139 498.8 355 66.8
CDE08G0729 Ceratophyllum demersum HOM05D004497 ORTHO05D005539 2.6e-138 496.1 379 65.4
Thhalv10007651m.g Eutrema salsugineum HOM05D004497 ORTHO05D005539 1.0e-137 494.2 381 63.8
Sp1g25270 Schrenkiella parvula HOM05D004497 ORTHO05D005539 3.8e-137 492.3 381 63.3
AL1G43130 Arabidopsis lyrata HOM05D004497 ORTHO05D005539 4.9e-137 491.9 390 63.6
THA.LOC104814264 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 4.9e-137 491.9 356 64.3
SalBow5G0098 Salvia bowleyana HOM05D004497 ORTHO05D005539 6.5e-137 491.5 403 62.3
SalBow5G4825 Salvia bowleyana HOM05D004497 ORTHO05D005539 6.5e-137 491.5 403 62.3
AT1G29320 Arabidopsis thaliana HOM05D004497 ORTHO05D005539 4.2e-136 488.8 390 62.6
BolC3t19835H Brassica oleracea HOM05D004497 ORTHO05D005539 7.1e-136 488.0 376 63.0
Cc05_g04600 Coffea canephora HOM05D004497 ORTHO05D005539 1.6e-135 486.9 382 62.8
BcaC01g00099 Brassica carinata HOM05D004497 ORTHO05D005539 2.1e-135 486.5 376 62.8
C03p75750 Brassica napus HOM05D004497 ORTHO05D005539 7.9e-135 484.6 376 62.8
A08p25140 Brassica napus HOM05D004497 ORTHO05D005539 1.3e-134 483.8 376 62.8
CARHR028640 Cardamine hirsuta HOM05D004497 ORTHO05D005539 1.5e-133 480.3 381 62.5
BraA09t39216Z Brassica rapa HOM05D004497 ORTHO05D005539 1.9e-133 479.9 371 62.3
BcaB03g12154 Brassica carinata HOM05D004497 ORTHO05D005539 2.5e-133 479.6 377 62.3
TWI39G1139 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 2.5e-133 479.6 410 62.0
Carub.0001s2754 Capsella rubella HOM05D004497 ORTHO05D005539 4.3e-133 478.8 373 64.1
BolC5t31537H Brassica oleracea HOM05D004497 ORTHO05D005539 3.1e-131 472.6 370 61.6
BcaB07g32523 Brassica carinata HOM05D004497 ORTHO05D005539 9.0e-131 471.1 374 63.1
BcaC05g26958 Brassica carinata HOM05D004497 ORTHO05D005539 1.5e-130 470.3 379 60.9
C05p28100 Brassica napus HOM05D004497 ORTHO05D005539 1.5e-130 470.3 379 60.9
A09p36980 Brassica napus HOM05D004497 ORTHO05D005539 4.5e-130 468.8 370 61.4
Prupe.1G584300 Prunus persica HOM05D004497 ORTHO05D005539 1.3e-129 467.2 379 64.1
Cfa014010 Carpinus fangiana HOM05D004497 ORTHO05D005539 5.0e-129 465.3 389 63.0
BraA08t34469Z Brassica rapa HOM05D004497 ORTHO05D005539 6.5e-129 464.9 403 58.1
AUR62025903 Chenopodium quinoa HOM05D004497 ORTHO05D005539 2.7e-127 459.5 359 63.8
CiPaw.11G010200 Carya illinoinensis HOM05D004497 ORTHO05D005539 6.7e-126 454.9 315 73.0
DCAR_012679 Daucus carota HOM05D004497 ORTHO05D005539 8.8e-126 454.5 360 64.7
Aa31LG6G6220 Aethionema arabicum HOM05D004497 ORTHO05D005539 9.7e-125 451.1 370 60.0
Duzib068G0683 Durio zibethinus HOM05D004497 ORTHO05D005539 1.2e-122 444.1 291 73.5
ATR0171G018 Amborella trichopoda HOM05D004497 ORTHO05D005539 6.5e-121 438.3 368 58.7
HPP92_023861 Vanilla planifolia HOM05D004497 ORTHO05D005539 7.2e-120 434.9 359 59.1
Zm00001eb105680 Zea mays HOM05D004497 ORTHO05D005539 7.9e-119 431.4 365 58.9
AUR62025086 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.0e-118 431.0 346 62.7
Cpa.g.sc166.23 Carica papaya HOM05D004497 ORTHO05D005539 1.3e-116 424.1 291 69.4
SEGI_30468 Sequoiadendron giganteum HOM05D004497 ORTHO05D005539 3.7e-116 422.5 361 56.5
AUR62032705 Chenopodium quinoa HOM05D004497 ORTHO05D005539 8.5e-113 411.4 390 55.1
SHI10599 Sapria himalayana HOM05D004497 ORTHO05D005539 4.7e-111 405.6 360 56.1
Sed0003097 Sechium edule HOM05D004497 ORTHO05D005539 1.3e-108 397.5 273 70.7
Aqoxy5G03495 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 1.5e-104 384.0 293 64.8
Sabra12G0069700 Salix brachista HOM05D004497 ORTHO05D005539 5.5e-104 382.1 294 65.3
unitig_699.g19657 Utricularia gibba HOM05D004497 ORTHO05D005539 4.1e-99 365.9 378 52.4
AUR62025094 Chenopodium quinoa HOM05D004497 ORTHO05D005539 2.7e-90 336.7 291 57.7
Pp3c13_24500 Physcomitrium patens HOM05D004497 ORTHO05D005539 4.5e-90 335.9 400 45.8
SMO165G0173 Selaginella moellendorffii HOM05D004497 ORTHO05D005539 6.6e-89 332.0 368 48.6
Mapoly0079s0016 Marchantia polymorpha HOM05D004497 ORTHO05D005539 1.9e-88 330.5 369 47.7
Os07g0506700 Oryza sativa ssp. japonica HOM05D004497 ORTHO05D005539 2.1e-87 327.0 296 55.7
Nitab4.5_0003013g0030 Nicotiana tabacum HOM05D004497 ORTHO05D005539 1.4e-78 297.7 340 50.3
vmacro19222 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 7.3e-72 275.4 344 46.5
Zm00001eb322320 Zea mays HOM05D004497 ORTHO05D005539 7.3e-72 275.4 200 65.5
Actinidia19491 Actinidia chinensis HOM05D004497 ORTHO05D005539 3.1e-70 270.0 324 47.8
AUR62029644 Chenopodium quinoa HOM05D004497 ORTHO05D005539 8.6e-65 251.9 226 58.4
AagrBONN_evm.TU.Sc2ySwM_344.3271 Anthoceros agrestis HOM05D000006 ORTHO05D004030 1.4e-59 234.6 303 42.2
RcHm_v2.0_Chr0c30g0501231 Rosa chinensis HOM05D004497 ORTHO05D005539 1.7e-57 227.6 364 40.4
RcHm_v2.0_Chr3g0452771 Rosa chinensis HOM05D004497 ORTHO05D005539 1.7e-57 227.6 364 40.4
Ca_16680_v3 Cicer arietinum L. HOM05D000160 ORTHO05D000496 1.4e-54 218.0 161 67.1
AUR62025088 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.7e-52 211.1 230 49.1
SalBow8G1815 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.9e-51 207.6 144 72.9
CBR_g31949 Chara braunii HOM05D004497 ORTHO05D005539 4.2e-51 206.5 380 37.4
RcHm_v2.0_Chr5g0041021 Rosa chinensis HOM05D004497 ORTHO05D005539 2.6e-45 187.2 367 35.1
AUR62025079 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.9e-35 154.5 121 60.3
Gohir.D13G181701 Gossypium hirsutum HOM05D004497 ORTHO05D005539 2.7e-26 124.0 105 56.2
Cre17.g718650 Chlamydomonas reinhardtii HOM05D004497 ORTHO05D005539 3.5e-26 123.6 391 27.1
MCO03G018 Micromonas commoda HOM05D004497 ORTHO05D005539 1.8e-25 121.3 205 34.6
TAR371G1248 Trochodendron aralioides HOM05D004497 ORTHO05D005539 2.3e-25 120.9 124 52.4
PRCOL_00003967 Prasinoderma coloniale HOM05D004497 ORTHO05D005539 4.2e-19 100.1 271 27.7
Oeu006698.1 Olea europaea HOM05D004497 ORTHO05D005539 6.0e-18 96.3 67 70.1
AUR62025092 Chenopodium quinoa HOM05D004497 ORTHO05D005539 4.3e-16 90.1 53 77.4
C04p39580 Brassica napus HOM05D004497 ORTHO05D005539 4.8e-15 86.7 86 53.5
BolC4t25523H Brassica oleracea HOM05D004497 ORTHO05D005539 4.8e-15 86.7 86 53.5
COL.COLO4_36170 Corchorus olitorius HOM05D021494 ORTHO05D022415 5.5e-11 73.2 41 75.6
Phvul.003G017700 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 3.0e-09 67.4 75 52.0


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