Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 1.9e-209 732.3 372 100.0
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 1.6e-147 526.6 381 71.9
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 9.7e-145 517.3 379 72.3
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 1.3e-144 516.9 360 71.7
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 6.9e-143 511.1 374 70.1
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 5.9e-142 508.1 381 68.5
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 7.7e-142 507.7 386 68.4
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 3.2e-140 502.3 385 67.8
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 4.2e-140 501.9 343 73.5
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 4.2e-140 501.9 374 69.3
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 5.5e-140 501.5 374 68.7
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 9.4e-140 500.7 321 75.4
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 9.4e-140 500.7 363 70.0
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 1.2e-139 500.4 338 73.7
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 1.0e-138 497.3 369 69.4
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 3.0e-138 495.7 375 69.1
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 6.7e-138 494.6 361 69.3
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 1.5e-137 493.4 356 71.1
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 3.3e-137 492.3 370 69.5
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.1e-135 487.3 361 67.9
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.4e-135 486.9 305 77.7
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 3.1e-135 485.7 309 76.4
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 7.0e-135 484.6 385 66.5
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 9.1e-135 484.2 309 76.1
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 9.1e-135 484.2 362 68.5
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.5e-134 482.3 373 67.8
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.2e-132 475.7 391 64.7
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 3.2e-132 475.7 380 65.3
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 1.6e-131 473.4 300 76.0
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 1.0e-130 470.7 326 71.5
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 1.4e-130 470.3 326 72.1
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 5.2e-130 468.4 376 64.1
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 8.8e-130 467.6 330 71.2
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 8.8e-130 467.6 364 64.6
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 1.2e-129 467.2 317 72.6
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 1.2e-129 467.2 317 72.6
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 1.5e-129 466.8 317 72.6
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 4.4e-129 465.3 313 73.2
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 5.7e-129 464.9 368 63.9
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 7.5e-129 464.5 377 65.3
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 7.5e-129 464.5 317 72.9
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 2.8e-128 462.6 358 64.2
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 3.7e-128 462.2 313 70.6
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 4.8e-128 461.8 368 64.1
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 6.3e-128 461.5 313 72.5
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 8.2e-128 461.1 334 68.6
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 1.1e-127 460.7 377 64.2
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 5.3e-127 458.4 371 62.8
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 5.9e-126 454.9 370 62.7
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 1.0e-125 454.1 358 64.0
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 1.3e-125 453.8 372 63.2
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 1.3e-125 453.8 370 63.8
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 2.9e-125 452.6 301 74.4
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 2.9e-125 452.6 393 61.3
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 3.8e-125 452.2 318 68.2
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 5.0e-125 451.8 379 60.7
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 8.5e-125 451.1 301 72.1
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 1.5e-124 450.3 317 68.5
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 1.5e-124 450.3 317 68.5
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 1.5e-124 450.3 369 63.1
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 1.5e-124 450.3 371 63.1
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 1.5e-124 450.3 371 63.1
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 2.5e-124 449.5 386 61.4
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 9.4e-124 447.6 368 61.1
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 1.6e-123 446.8 372 62.4
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 3.6e-123 445.7 375 61.6
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 6.1e-123 444.9 372 61.6
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 3.0e-122 442.6 423 56.5
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 1.2e-121 440.7 321 67.0
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 1.3e-120 437.2 304 70.4
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 1.4e-119 433.7 342 65.5
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 4.1e-119 432.2 319 67.7
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 2.2e-117 426.4 310 67.7
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 6.5e-117 424.9 372 59.4
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 3.2e-116 422.5 300 70.3
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.2e-116 422.2 297 72.1
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 7.2e-116 421.4 376 60.9
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 7.2e-116 421.4 289 72.3
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 3.6e-115 419.1 268 76.5
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 1.0e-114 417.5 356 60.7
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 1.0e-114 417.5 372 59.4
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 1.8e-114 416.8 380 59.7
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 5.2e-114 415.2 383 59.5
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 2.6e-113 412.9 317 63.7
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 9.8e-113 411.0 398 57.8
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 5.4e-111 405.2 306 65.7
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 7.8e-110 401.4 372 57.5
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 2.9e-109 399.4 290 68.3
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 5.6e-108 395.2 272 71.3
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 7.3e-108 394.8 337 57.9
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 1.2e-102 377.5 277 68.6
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 1.2e-102 377.5 336 58.0
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 3.3e-100 369.4 327 60.6
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 1.2e-99 367.5 338 58.3
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 4.7e-99 365.5 320 56.2
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.9e-96 356.3 345 57.7
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 8.3e-96 354.8 225 74.7
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 1.4e-95 354.0 523 43.6
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 5.4e-95 352.1 336 55.4
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 3.3e-92 342.8 354 51.4
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 1.3e-85 320.9 262 62.6
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 9.5e-84 314.7 343 46.9
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 7.1e-79 298.5 303 50.2
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 9.6e-76 288.1 336 42.0
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 9.9e-73 278.1 326 43.9
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 9.9e-73 278.1 242 63.2
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 1.4e-63 247.7 157 75.8
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 4.2e-63 246.1 245 55.9
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 7.9e-62 241.9 197 62.4
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 5.6e-52 209.1 194 57.2
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 6.5e-48 195.7 162 62.3
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 2.5e-44 183.7 229 47.2
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 8.2e-43 178.7 134 64.2
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 1.4e-42 177.9 164 59.8
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 1.2e-41 174.9 142 58.5
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 5.5e-39 166.0 169 53.8
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 1.6e-38 164.5 169 55.0
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 2.5e-36 157.1 112 69.6
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 4.8e-35 152.9 183 47.5
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 8.5e-32 142.1 198 37.4
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.0e-29 135.2 89 76.4
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 3.4e-25 120.2 126 52.4
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 2.9e-24 117.1 196 35.2
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 1.4e-10 71.6 97 45.4
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 5.3e-10 69.7 40 80.0
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 5.3e-10 69.7 40 80.0
BolC2t11174H Brassica oleracea HOM05D006137 ORTHO05D007697 2.2e-08 64.3 31 83.9
Cre16.g659850 Chlamydomonas reinhardtii HOM05D006137 ORTHO05D007697 5.0e-08 63.2 209 23.9
MCO12G135 Micromonas commoda HOM05D002058 ORTHO05D003758 5.0e-08 63.2 194 25.3
Mapoly0035s0139 Marchantia polymorpha HOM05D002058 ORTHO05D003758 1.9e-07 61.2 148 30.4
Mapoly0089s0033 Marchantia polymorpha HOM05D002058 ORTHO05D003758 4.2e-07 60.1 197 27.9
SEGI_36463 Sequoiadendron giganteum HOM05D002058 ORTHO05D009216 1.6e-06 58.2 133 30.8


User provided reference genes

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