Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 2.7e-164 582.0 315 100.0
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 3.2e-88 329.3 323 57.0
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 1.1e-72 277.7 312 51.0
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 3.5e-71 272.7 319 52.7
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 1.0e-70 271.2 314 51.6
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 3.0e-70 269.6 322 51.2
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 5.1e-70 268.9 314 51.3
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 9.6e-69 264.6 322 50.6
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 3.6e-68 262.7 326 50.3
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 3.6e-68 262.7 345 49.3
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 1.4e-67 260.8 325 49.5
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 4.5e-66 255.8 323 48.3
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 4.5e-66 255.8 323 48.0
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 7.6e-66 255.0 324 49.1
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 1.6e-63 247.3 334 50.0
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 1.3e-62 244.2 323 54.8
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 3.9e-62 242.7 329 48.3
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 8.7e-62 241.5 329 48.0
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 1.5e-61 240.7 323 46.4
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 2.5e-61 240.0 304 50.0
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 2.8e-60 236.5 328 48.5
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 1.4e-59 234.2 345 45.8
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 2.4e-59 233.4 320 45.9
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 7.6e-58 228.4 303 48.5
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 1.7e-57 227.3 325 42.8
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.7e-57 227.3 319 45.5
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 3.8e-57 226.1 321 45.8
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.1e-56 224.6 312 45.8
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 4.6e-55 219.2 256 51.2
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 1.8e-54 217.2 258 52.3
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 3.3e-53 213.0 313 42.8
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 1.4e-51 207.6 313 41.9
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 3.1e-51 206.5 325 42.2
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 6.9e-51 205.3 316 44.9
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 3.4e-50 203.0 327 43.1
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 5.8e-50 202.2 321 41.4
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 8.4e-49 198.4 326 40.5
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 1.2e-47 194.5 272 46.0
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 2.1e-47 193.7 318 39.6
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 7.9e-47 191.8 323 40.6
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 1.8e-46 190.7 245 49.4
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 2.3e-46 190.3 328 40.5
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 5.1e-46 189.1 296 43.9
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 8.2e-44 181.8 299 40.1
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 4.1e-43 179.5 320 39.1
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 5.3e-43 179.1 323 39.6
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 5.3e-43 179.1 354 38.7
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 6.9e-43 178.7 323 38.4
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 2.0e-42 177.2 318 38.7
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 5.9e-42 175.6 304 41.1
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 1.0e-41 174.9 318 39.0
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 1.7e-41 174.1 308 41.6
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 6.5e-41 172.2 326 41.7
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 8.5e-41 171.8 322 37.6
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 3.2e-40 169.9 349 37.5
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 9.4e-40 168.3 310 40.0
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.7e-39 166.8 312 39.4
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 3.6e-39 166.4 327 37.0
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 3.6e-39 166.4 327 37.0
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 7.9e-39 165.2 319 39.8
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 7.9e-39 165.2 319 37.6
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 9.7e-37 158.3 292 38.0
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 9.7e-37 158.3 310 38.1
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 9.7e-37 158.3 318 38.1
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 3.7e-36 156.4 319 38.2
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 1.1e-35 154.8 311 37.9
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 2.6e-34 150.2 321 38.6
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 2.6e-34 150.2 319 36.4
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 5.9e-34 149.1 319 36.4
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 1.0e-33 148.3 210 44.8
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 1.3e-33 147.9 354 34.2
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 1.7e-33 147.5 313 38.3
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 3.8e-33 146.4 317 37.5
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 8.5e-33 145.2 325 36.0
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 3.2e-32 143.3 347 34.6
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 4.2e-32 142.9 306 37.6
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 3.6e-31 139.8 197 42.1
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 6.7e-30 135.6 325 36.0
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 5.7e-29 132.5 337 34.4
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 2.4e-27 127.1 339 35.7
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 5.9e-26 122.5 352 31.0
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 9.4e-24 115.2 302 34.1
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 3.0e-22 110.2 243 36.2
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 3.1e-19 100.1 297 34.0
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 2.9e-17 93.6 347 29.4
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 1.5e-16 91.3 331 29.6
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 2.5e-16 90.5 267 31.5
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 5.7e-13 79.3 343 25.9
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 1.3e-12 78.2 320 25.9
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 1.4e-11 74.7 161 34.2
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 3.1e-11 73.6 155 36.1
MBI04_g32200_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 5.3e-11 72.8 87 49.4
Aqoxy1G00983 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 3.5e-10 70.1 175 31.4
Zm00001eb251400 Zea mays HOM05D007538 ORTHO05D009464 7.2e-08 62.4 302 28.5
CDE12G0316 Ceratophyllum demersum HOM05D061004 ORTHO05D043845 3.0e-06 57.0 188 29.8


User provided reference genes

Program Settings