Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01013070001 Vitis vinifera HOM05D002388 ORTHO05D008833 1.1e-37 159.5 81 100.0
QL12p001301 Quercus lobata HOM05D002388 ORTHO05D008833 4.1e-32 141.0 78 85.9
CiPaw.11G097500 Carya illinoinensis HOM05D002388 ORTHO05D008833 7.0e-32 140.2 78 85.9
Sabra01G0106900 Salix brachista HOM05D002388 ORTHO05D008833 7.0e-32 140.2 78 87.2
Potri.001G138100 Populus trichocarpa HOM05D002388 ORTHO05D008833 1.6e-31 139.0 78 85.9
PGR031G2620 Punica granatum HOM05D002388 ORTHO05D008833 1.6e-31 139.0 80 85.0
Actinidia14785 Actinidia chinensis HOM05D002388 ORTHO05D008833 2.0e-31 138.7 78 88.5
Medtr2g014320 Medicago truncatula HOM05D002388 ORTHO05D008833 2.0e-31 138.7 79 84.8
TAR375G0363 Trochodendron aralioides HOM05D002388 ORTHO05D008833 2.0e-31 138.7 78 83.3
CiPaw.12G067300 Carya illinoinensis HOM05D002388 ORTHO05D008833 2.7e-31 138.3 78 88.5
Glyma.10G041600 Glycine max HOM05D002388 ORTHO05D008833 3.5e-31 137.9 78 85.9
Lj1g0006191 Lotus japonicus HOM05D002388 ORTHO05D008833 3.5e-31 137.9 79 84.8
Haze_08171 Corylus avellana HOM05D002388 ORTHO05D008833 4.5e-31 137.5 78 85.9
DCAR_004281 Daucus carota HOM05D002388 ORTHO05D008833 4.5e-31 137.5 78 85.9
MD06G1025500 Malus domestica HOM05D002388 ORTHO05D008833 4.5e-31 137.5 78 83.3
Prupe.5G029600 Prunus persica HOM05D002388 ORTHO05D008833 4.5e-31 137.5 78 83.3
Dinv28991 Davidia involucrata HOM05D002388 ORTHO05D008833 5.9e-31 137.1 78 87.2
Medtr8g066600 Medicago truncatula HOM05D002388 ORTHO05D008833 5.9e-31 137.1 78 84.6
Ciclev10003014m.g Citrus clementina HOM05D002388 ORTHO05D008833 7.8e-31 136.7 78 84.6
THA.LOC104804589 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 7.8e-31 136.7 78 87.2
TWI81G0136 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 7.8e-31 136.7 78 83.3
Nn3g19407 Nelumbo nucifera HOM05D002388 ORTHO05D008833 1.0e-30 136.3 78 84.6
Hma1.2p1_0870F.1_g230830 Hydrangea macrophylla HOM05D002388 ORTHO05D008833 1.3e-30 136.0 78 84.6
Manes.04G058600 Manihot esculenta HOM05D002388 ORTHO05D008833 1.3e-30 136.0 78 87.2
Thecc.03G308600 Theobroma cacao HOM05D002388 ORTHO05D008833 1.3e-30 136.0 78 87.2
TWI60G0513 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 1.3e-30 136.0 78 82.1
Eucgr.D02219 Eucalyptus grandis HOM05D002388 ORTHO05D008833 1.7e-30 135.6 78 82.1
Glyma.13G128600 Glycine max HOM05D002388 ORTHO05D008833 1.7e-30 135.6 78 84.6
MD16G1280900 Malus domestica HOM05D002388 ORTHO05D008833 1.7e-30 135.6 78 80.8
arahy.Tifrunner.gnm1.ann1.Y11EX9 Arachis hypogaea HOM05D002388 ORTHO05D008833 2.3e-30 135.2 78 82.1
Duzib068G0043 Durio zibethinus HOM05D002388 ORTHO05D008833 2.3e-30 135.2 78 85.9
TPR.G3364 Trifolium pratense HOM05D002388 ORTHO05D008833 2.3e-30 135.2 78 85.9
CSS0033524 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 3.8e-30 134.4 79 83.5
CSS0026703 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 5.0e-30 134.0 79 83.5
TAR119G0002 Trochodendron aralioides HOM05D002388 ORTHO05D008833 5.0e-30 134.0 79 81.0
Psat4g122960 Pisum sativum HOM05D002388 ORTHO05D008833 8.6e-30 133.3 78 83.3
vmacro14193 Vaccinium macrocarpon HOM05D002388 ORTHO05D008833 1.5e-29 132.5 78 83.3
FAN04G1000 Fragaria x ananassa HOM05D002388 ORTHO05D008833 1.9e-29 132.1 78 82.1
EL10Ac5g12027 Beta vulgaris HOM05D002388 ORTHO05D008833 3.3e-29 131.3 78 82.1
Cc08_g03400 Coffea canephora HOM05D002388 ORTHO05D008833 3.3e-29 131.3 78 80.8
Duzib205G0142 Durio zibethinus HOM05D002388 ORTHO05D008833 3.3e-29 131.3 78 83.3
FAN18G1485 Fragaria x ananassa HOM05D002388 ORTHO05D008833 3.3e-29 131.3 78 80.8
RcHm_v2.0_Chr7g0211611 Rosa chinensis HOM05D002388 ORTHO05D008833 3.3e-29 131.3 78 80.8
Aa31LG4G4590 Aethionema arabicum HOM05D002388 ORTHO05D008833 4.3e-29 131.0 78 84.6
A02p19260 Brassica napus HOM05D002388 ORTHO05D008833 4.3e-29 131.0 78 84.6
BolC2t09212H Brassica oleracea HOM05D002388 ORTHO05D008833 4.3e-29 131.0 78 84.6
BraA07t31559Z Brassica rapa HOM05D002388 ORTHO05D008833 4.3e-29 131.0 78 84.6
Thhalv10019650m.g Eutrema salsugineum HOM05D002388 ORTHO05D008833 4.3e-29 131.0 78 84.6
SalBow6G3465 Salvia bowleyana HOM05D002388 ORTHO05D008833 4.3e-29 131.0 78 80.8
BraA02t06971Z Brassica rapa HOM05D002388 ORTHO05D008833 5.6e-29 130.6 78 84.6
Carub.0002s2112 Capsella rubella HOM05D002388 ORTHO05D008833 5.6e-29 130.6 78 83.3
FAN08G0310 Fragaria x ananassa HOM05D002388 ORTHO05D008833 5.6e-29 130.6 78 80.8
SGA_v2.0_scaffold20G09240 Striga asiatica HOM05D002388 ORTHO05D008833 7.3e-29 130.2 78 78.2
Gohir.D08G175050 Gossypium hirsutum HOM05D002388 ORTHO05D008833 9.5e-29 129.8 78 82.1
Gorai.004G182800 Gossypium raimondii HOM05D002388 ORTHO05D008833 9.5e-29 129.8 78 82.1
CARHR067600 Cardamine hirsuta HOM05D002388 ORTHO05D008833 1.2e-28 129.4 78 83.3
AUR62018655 Chenopodium quinoa HOM05D002388 ORTHO05D008833 2.1e-28 128.6 78 82.1
BcaC08g46864 Brassica carinata HOM05D002388 ORTHO05D008833 2.8e-28 128.3 78 83.3
BolC6t39879H Brassica oleracea HOM05D002388 ORTHO05D008833 2.8e-28 128.3 78 83.3
AL2G34200 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 3.6e-28 127.9 78 80.8
AT1G74340 Arabidopsis thaliana HOM05D002388 ORTHO05D008833 3.6e-28 127.9 78 80.8
Migut.A01083 Erythranthe guttata HOM05D002388 ORTHO05D008833 3.6e-28 127.9 78 78.2
Sp5g29500 Schrenkiella parvula HOM05D002388 ORTHO05D008833 3.6e-28 127.9 78 82.1
AUR62007344 Chenopodium quinoa HOM05D002388 ORTHO05D008833 4.7e-28 127.5 78 82.1
HanXRQChr17g0538091 Helianthus annuus HOM05D002388 ORTHO05D008833 4.7e-28 127.5 78 74.4
Lsat_1_v5_gn_3_19620 Lactuca sativa HOM05D002388 ORTHO05D008833 4.7e-28 127.5 80 71.2
COL.COLO4_16958 Corchorus olitorius HOM05D002388 ORTHO05D008833 6.1e-28 127.1 78 82.1
Cpa.g.sc13.304 Carica papaya HOM05D002388 ORTHO05D008833 1.0e-27 126.3 78 79.5
CsaV3_3G001440 Cucumis sativus L. HOM05D002388 ORTHO05D008833 1.0e-27 126.3 78 80.8
Sed0013912 Sechium edule HOM05D002388 ORTHO05D008833 1.0e-27 126.3 78 80.8
MELO3C013830.2 Cucumis melo HOM05D002388 ORTHO05D008833 1.4e-27 125.9 78 79.5
Ah.12g055420 Amaranthus hybridus HOM05D002388 ORTHO05D008833 1.8e-27 125.6 78 76.9
Nitab4.5_0000556g0150 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.8e-27 125.6 78 75.6
PSO384G4479 Papaver somniferum HOM05D002388 ORTHO05D008833 1.8e-27 125.6 78 76.9
Phvul.003G283500 Phaseolus vulgaris HOM05D002388 ORTHO05D008833 1.8e-27 125.6 78 78.2
CSS0009097 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 2.3e-27 125.2 78 80.8
CAN.G137.4 Capsicum annuum HOM05D002388 ORTHO05D008833 2.3e-27 125.2 78 76.9
Peaxi162Scf00185g00821 Petunia axillaris HOM05D002388 ORTHO05D008833 2.3e-27 125.2 78 75.6
CANSAT21G0073 Cannabis sativa HOM05D002388 ORTHO05D008833 3.0e-27 124.8 78 79.5
ECA246G0855 Erigeron canadensis HOM05D002388 ORTHO05D008833 3.0e-27 124.8 78 73.1
Lalb_Chr05g0225791 Lupinus albus HOM05D002388 ORTHO05D008833 3.0e-27 124.8 78 79.5
Nitab4.5_0002778g0070 Nicotiana tabacum HOM05D002388 ORTHO05D008833 5.2e-27 124.0 78 75.6
PSO339G0280 Papaver somniferum HOM05D002388 ORTHO05D008833 5.2e-27 124.0 78 75.6
Peaxi162Scf00045g00216 Petunia axillaris HOM05D002388 ORTHO05D008833 5.2e-27 124.0 78 74.4
Nitab4.5_0001632g0030 Nicotiana tabacum HOM05D002388 ORTHO05D008833 8.9e-27 123.2 79 73.4
CSS0006499 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 1.2e-26 122.9 78 79.5
Solyc08g005210.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 1.2e-26 122.9 78 74.4
Sopen08g001240 Solanum pennellii HOM05D002388 ORTHO05D008833 1.2e-26 122.9 78 74.4
CAN.G474.16 Capsicum annuum HOM05D002388 ORTHO05D008833 2.6e-26 121.7 78 73.1
Os11g0311550 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 2.6e-26 121.7 80 75.0
Peaxi162Scf00038g00010 Petunia axillaris HOM05D002388 ORTHO05D008833 2.6e-26 121.7 78 73.1
unitig_32.g10897 Utricularia gibba HOM05D002388 ORTHO05D008833 3.4e-26 121.3 78 74.4
CDE05G0657 Ceratophyllum demersum HOM05D002388 ORTHO05D008833 4.4e-26 120.9 79 69.6
Solyc06g066400.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 1.3e-25 119.4 78 71.8
Sopen06g021590 Solanum pennellii HOM05D002388 ORTHO05D008833 1.3e-25 119.4 78 71.8
Nitab4.5_0000109g0080 Nicotiana tabacum HOM05D002388 ORTHO05D008833 3.7e-25 117.9 78 70.5
PGSC0003DMG400016784 Solanum tuberosum HOM05D002388 ORTHO05D008833 3.7e-25 117.9 78 70.5
THA.LOC104808763 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 4.9e-25 117.5 76 77.6
PGSC0003DMG400003487 Solanum tuberosum HOM05D002388 ORTHO05D008833 6.4e-25 117.1 78 71.8
ATR0564G363 Amborella trichopoda HOM05D002388 ORTHO05D008833 1.4e-24 115.9 79 68.4
SEGI_36022 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 2.4e-24 115.2 81 69.1
Nn1g00187 Nelumbo nucifera HOM05D002388 ORTHO05D008833 2.1e-20 102.1 57 87.7
Mapoly0067s0029 Marchantia polymorpha HOM05D002388 ORTHO05D008833 1.1e-19 99.8 77 61.0
AagrBONN_evm.TU.Sc2ySwM_228.4391 Anthoceros agrestis HOM05D003123 ORTHO05D003492 1.2e-18 96.3 76 57.9
Pp3c22_2990 Physcomitrium patens HOM05D002388 ORTHO05D008833 1.2e-18 96.3 81 61.7
PGSC0003DMG400043827 Solanum tuberosum HOM05D002388 ORTHO05D008833 2.0e-18 95.5 78 61.5
CSS0023919 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 1.3e-17 92.8 80 68.8
SEGI_14802 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 5.4e-16 87.4 64 65.6
arahy.Tifrunner.gnm1.ann1.G961TR Arachis hypogaea HOM05D002388 ORTHO05D008833 1.6e-15 85.9 79 59.5
Hund14364 Selenicereus undatus HOM05D002388 ORTHO05D008833 2.7e-15 85.1 48 83.3
Os02g0140101 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 1.3e-14 82.8 50 78.0
BcaB05g24849 Brassica carinata HOM05D002388 ORTHO05D008833 1.7e-14 82.4 47 83.0
ClCG10G001370 Citrullus lanatus HOM05D002388 ORTHO05D008833 1.1e-13 79.7 50 78.0
PGSC0003DMG400016734 Solanum tuberosum HOM05D002388 ORTHO05D008833 4.3e-13 77.8 52 69.2
Peaxi162Scf00218g02111 Petunia axillaris HOM05D004298 ORTHO05D008833 2.1e-07 58.9 39 59.0
MCO11G506 Micromonas commoda HOM05D002388 ORTHO05D008833 7.8e-07 57.0 68 38.2


User provided reference genes

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