Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 7.7e-189 663.7 342 100.0
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 4.8e-122 441.8 343 69.4
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 2.8e-114 416.0 343 64.1
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 5.5e-102 375.2 326 63.5
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 3.3e-99 365.9 345 58.0
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 7.4e-99 364.8 335 61.2
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 1.8e-97 360.1 331 62.8
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 5.3e-97 358.6 350 57.4
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 9.0e-97 357.8 317 63.1
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 3.8e-95 352.4 344 57.3
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 1.9e-94 350.1 344 59.0
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 6.1e-93 345.1 340 55.6
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 1.4e-92 344.0 336 57.1
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 8.8e-92 341.3 331 59.5
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 1.5e-91 340.5 312 58.7
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 1.3e-90 337.4 343 55.7
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 3.7e-90 335.9 326 57.1
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 3.1e-89 332.8 326 56.1
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 1.5e-88 330.5 326 56.1
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 2.2e-87 326.6 338 54.4
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 1.9e-86 323.6 310 55.8
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 4.2e-86 322.4 315 56.8
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 2.7e-85 319.7 315 59.0
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.0e-84 317.8 329 56.2
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 3.0e-84 316.2 329 56.2
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 5.1e-84 315.5 329 55.9
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 5.1e-84 315.5 329 55.9
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 6.7e-84 315.1 452 44.9
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 8.8e-84 314.7 315 58.4
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 2.6e-83 313.2 310 55.2
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 9.7e-83 311.2 327 55.4
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 2.8e-82 309.7 342 50.6
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 3.7e-82 309.3 329 55.0
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 1.1e-81 307.8 265 62.3
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 2.4e-81 306.6 342 49.4
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 3.1e-81 306.2 330 54.5
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 6.9e-81 305.1 311 55.3
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 1.5e-80 303.9 307 56.0
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 3.4e-80 302.8 290 58.6
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 4.5e-80 302.4 313 55.0
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 1.0e-79 301.2 333 53.2
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 1.3e-79 300.8 310 54.8
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 1.3e-79 300.8 310 54.8
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 1.3e-79 300.8 343 49.9
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 1.4e-78 297.4 310 52.6
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 5.5e-78 295.4 307 53.4
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 2.7e-77 293.1 304 52.3
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 3.6e-77 292.7 304 54.3
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 1.0e-76 291.2 300 53.7
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 1.8e-76 290.4 337 50.1
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 3.3e-75 286.2 338 48.2
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 2.4e-73 280.0 314 50.3
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 4.1e-73 279.3 303 54.5
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 2.6e-72 276.6 318 51.3
Cc00_g09430 Coffea canephora HOM05D006140 ORTHO05D007834 2.2e-71 273.5 279 54.5
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 6.5e-71 271.9 300 53.3
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 6.5e-71 271.9 361 47.1
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 1.6e-69 267.3 328 47.3
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 2.1e-69 266.9 333 48.9
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 2.7e-69 266.5 340 47.4
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 2.7e-69 266.5 290 51.0
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 4.7e-69 265.8 285 54.7
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 1.0e-68 264.6 284 53.5
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 1.5e-67 260.8 290 49.3
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 2.6e-67 260.0 309 51.8
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 2.6e-67 260.0 309 51.8
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 2.6e-67 260.0 309 51.8
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 9.7e-67 258.1 346 46.2
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 6.3e-66 255.4 287 53.0
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 1.1e-65 254.6 289 53.3
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 2.0e-64 250.4 279 54.5
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 5.9e-64 248.8 287 53.0
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 5.9e-64 248.8 287 53.0
PGSC0003DMG401009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 1.3e-63 247.7 274 50.0
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 3.8e-63 246.1 350 43.7
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 5.0e-63 245.7 283 52.3
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 6.5e-63 245.4 283 51.9
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 1.1e-62 244.6 290 49.0
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 4.2e-62 242.7 297 49.8
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 2.1e-61 240.4 283 50.5
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 5.2e-60 235.7 368 41.6
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 1.5e-59 234.2 283 49.5
Lj3g0005794 Lotus japonicus HOM05D006140 ORTHO05D007834 4.8e-58 229.2 230 54.3
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 1.8e-57 227.3 280 51.8
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 1.2e-56 224.6 283 48.1
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 3.5e-56 223.0 296 47.0
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 5.9e-56 222.2 304 46.1
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 3.6e-53 213.0 332 41.9
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 2.4e-49 200.3 293 42.7
Haze_08125 Corylus avellana HOM05D006140 ORTHO05D007834 1.5e-46 191.0 162 66.0
Hma1.2p1_1460F.1_g284980 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 2.6e-43 180.3 342 40.6
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 1.6e-37 161.0 152 58.6
Zm00001eb208860 Zea mays HOM05D006140 ORTHO05D007834 4.7e-37 159.5 284 38.0
unitig_32.g10971 Utricularia gibba HOM05D006140 ORTHO05D007834 7.0e-33 145.6 208 40.9
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 1.2e-32 144.8 330 36.1
CDE02G1222 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 1.6e-32 144.4 155 54.2
MBI04_g20983_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 4.7e-29 132.9 132 57.6
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 3.1e-28 130.2 345 30.4
SHI20257 Sapria himalayana HOM05D006140 ORTHO05D007834 5.8e-27 125.9 165 47.9
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 4.6e-24 116.3 130 52.3
Hma1.2p1_1819F.1_g304030 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 1.9e-22 110.9 93 61.3
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 2.4e-12 77.4 389 23.7
Oeu063929.1 Olea europaea HOM05D006140 ORTHO05D007834 3.8e-10 70.1 55 61.8
SMO367G0412 Selaginella moellendorffii HOM05D006140 ORTHO05D007834 5.4e-09 66.2 274 24.1
Mapoly0016s0037 Marchantia polymorpha HOM05D006140 ORTHO05D007834 1.0e-07 62.0 194 28.9
Medtr5g019630 Medicago truncatula HOM05D006140 ORTHO05D007834 3.9e-07 60.1 84 44.0
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 2.5e-06 57.4 47 57.4


User provided reference genes

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