Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01012885001 Vitis vinifera HOM05D000054 ORTHO05D015321 2.4e-50 201.8 100 100.0
GSVIVG01014134001 Vitis vinifera HOM05D000054 ORTHO05D000171 1.2e-20 103.2 60 86.7
GSVIVG01014140001 Vitis vinifera HOM05D000054 ORTHO05D000171 3.3e-15 85.1 60 71.7
GSVIVG01014145001 Vitis vinifera HOM05D000054 ORTHO05D000171 3.3e-15 85.1 60 71.7
GSVIVG01014138001 Vitis vinifera HOM05D000054 ORTHO05D000171 1.6e-14 82.8 60 68.3
TAR624G0629 Trochodendron aralioides HOM05D000054 ORTHO05D000171 3.7e-14 81.6 60 60.0
GSVIVG01014147001 Vitis vinifera HOM05D000054 ORTHO05D000171 6.2e-14 80.9 61 68.9
CSS0033063 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 8.1e-14 80.5 60 61.7
Potri.001G385600 Populus trichocarpa HOM05D000054 ORTHO05D000171 5.3e-13 77.8 57 66.7
TAR624G0357 Trochodendron aralioides HOM05D000054 ORTHO05D000171 5.3e-13 77.8 69 56.5
Nn3g21041 Nelumbo nucifera HOM05D000054 ORTHO05D000171 1.5e-12 76.3 60 61.7
Sabra16G0254200 Salix brachista HOM05D000054 ORTHO05D000171 2.0e-12 75.9 83 54.2
Dinv13369 Davidia involucrata HOM05D000054 ORTHO05D000171 2.6e-12 75.5 61 62.3
PGR083G0379 Punica granatum HOM05D000054 ORTHO05D000171 3.4e-12 75.1 61 62.3
Dinv15014 Davidia involucrata HOM05D000054 ORTHO05D000171 4.5e-12 74.7 82 52.4
Potri.003G025632 Populus trichocarpa HOM05D000054 ORTHO05D000171 4.5e-12 74.7 57 64.9
TWI39G1181 Tripterygium wilfordii HOM05D000054 ORTHO05D000171 4.5e-12 74.7 83 55.4
Haze_09272 Corylus avellana HOM05D000054 ORTHO05D000171 5.8e-12 74.3 60 60.0
Potri.003G026325 Populus trichocarpa HOM05D000054 ORTHO05D000171 5.8e-12 74.3 58 63.8
Potri.011G106400 Populus trichocarpa HOM05D000054 ORTHO05D000171 5.8e-12 74.3 57 64.9
EL10Ac4g08404 Beta vulgaris HOM05D000054 ORTHO05D000171 7.6e-12 73.9 83 47.0
Potri.001G385400 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.0e-11 73.6 57 63.2
Potri.001G385900 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.0e-11 73.6 57 63.2
Potri.003G025800 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.0e-11 73.6 57 63.2
Hma1.2p1_0050F.1_g028940 Hydrangea macrophylla HOM05D000054 ORTHO05D000171 1.3e-11 73.2 60 56.7
CiPaw.12G111500 Carya illinoinensis HOM05D000054 ORTHO05D000171 1.7e-11 72.8 60 56.7
Peaxi162Scf00000g00708 Petunia axillaris HOM05D000054 ORTHO05D000171 2.2e-11 72.4 58 55.2
Haze_13412 Corylus avellana HOM05D000054 ORTHO05D000171 2.9e-11 72.0 60 58.3
Nn6g34393 Nelumbo nucifera HOM05D000054 ORTHO05D005077 2.9e-11 72.0 60 55.0
Nn6g34449 Nelumbo nucifera HOM05D000054 ORTHO05D000171 2.9e-11 72.0 60 55.0
Phvul.011G167800 Phaseolus vulgaris HOM05D000054 ORTHO05D000171 2.9e-11 72.0 61 60.7
Cc05_g10840 Coffea canephora HOM05D000054 ORTHO05D000171 3.8e-11 71.6 59 61.0
Lj1A826T68 Lonicera japonica HOM05D000054 ORTHO05D000171 3.8e-11 71.6 60 56.7
GSVIVG01014150001 Vitis vinifera HOM05D000054 ORTHO05D000171 4.9e-11 71.2 63 58.7
Atru.chr2.2026 Acer truncatum HOM05D000054 ORTHO05D005077 6.5e-11 70.9 61 57.4
Prupe.4G158000 Prunus persica HOM05D000054 ORTHO05D000171 6.5e-11 70.9 60 60.0
Rhsim06G0211100 Rhododendron simsii HOM05D000054 ORTHO05D000171 6.5e-11 70.9 61 59.0
FvH4_3g17940 Fragaria vesca HOM05D000054 ORTHO05D000171 1.1e-10 70.1 60 58.3
FAN21G0678 Fragaria x ananassa HOM05D000054 ORTHO05D000171 1.1e-10 70.1 60 58.3
RcHm_v2.0_Chr5g0029911 Rosa chinensis HOM05D000054 ORTHO05D000171 1.1e-10 70.1 60 58.3
Thecc.07G129100 Theobroma cacao HOM05D000054 ORTHO05D000171 1.1e-10 70.1 60 58.3
QL10p027809 Quercus lobata HOM05D000054 ORTHO05D000171 1.4e-10 69.7 61 57.4
SalBow8G2370 Salvia bowleyana HOM05D000054 ORTHO05D000171 1.4e-10 69.7 57 57.9
TAR624G0477 Trochodendron aralioides HOM05D000054 ORTHO05D000171 1.4e-10 69.7 55 56.4
AUR62019625 Chenopodium quinoa HOM05D000054 ORTHO05D000171 1.9e-10 69.3 61 57.4
Manes.03G091900 Manihot esculenta HOM05D000054 ORTHO05D000171 1.9e-10 69.3 60 56.7
Sabra11G0094800 Salix brachista HOM05D000054 ORTHO05D000283 1.9e-10 69.3 58 63.8
vmacro11963 Vaccinium macrocarpon HOM05D000054 ORTHO05D000171 1.9e-10 69.3 59 55.9
VMungo1127G2210 Vigna mungo HOM05D000054 ORTHO05D000171 1.9e-10 69.3 58 60.3
Glyma.13G266300 Glycine max HOM05D000054 ORTHO05D000171 2.5e-10 68.9 61 59.0
Nitab4.5_0000035g0400 Nicotiana tabacum HOM05D000054 ORTHO05D000171 3.2e-10 68.6 61 55.7
Nitab4.5_0003166g0030 Nicotiana tabacum HOM05D000054 ORTHO05D000171 3.2e-10 68.6 61 55.7
QL08p025818 Quercus lobata HOM05D000054 ORTHO05D000171 3.2e-10 68.6 61 55.7
QL10p027704 Quercus lobata HOM05D000054 ORTHO05D000171 3.2e-10 68.6 61 55.7
FAN16G1129 Fragaria x ananassa HOM05D000054 ORTHO05D000171 4.2e-10 68.2 60 56.7
FAN11G3500 Fragaria x ananassa HOM05D000054 ORTHO05D000171 5.5e-10 67.8 60 56.7
QL02p081039 Quercus lobata HOM05D000054 ORTHO05D000171 5.5e-10 67.8 61 55.7
Rhsim04G0035500 Rhododendron simsii HOM05D000054 ORTHO05D000171 5.5e-10 67.8 62 54.8
Glyma.12G155900 Glycine max HOM05D000054 ORTHO05D000171 7.1e-10 67.4 61 59.0
Hma1.2p1_0325F.1_g125780 Hydrangea macrophylla HOM05D000054 ORTHO05D015321 7.1e-10 67.4 63 55.6
Hma1.2p1_2701F.1_g327065 Hydrangea macrophylla HOM05D000054 ORTHO05D015321 7.1e-10 67.4 63 55.6
Atru.chr2.2019 Acer truncatum HOM05D000054 ORTHO05D000171 9.3e-10 67.0 61 60.7
Lj1C826T7 Lonicera japonica HOM05D000054 ORTHO05D015321 9.3e-10 67.0 61 55.7
Duzib213G0607 Durio zibethinus HOM05D000054 ORTHO05D000171 1.6e-09 66.2 60 53.3
CANSAT56G1606 Cannabis sativa HOM05D000054 ORTHO05D000171 2.1e-09 65.9 60 53.3
MELO3C025664.2 Cucumis melo HOM05D000054 ORTHO05D000171 2.1e-09 65.9 61 50.8
CsaV3_4G032890 Cucumis sativus L. HOM05D000054 ORTHO05D000171 2.1e-09 65.9 61 50.8
GSVIVG01014149001 Vitis vinifera HOM05D000054 ORTHO05D000171 2.1e-09 65.9 64 56.2
Ciclev10018721m.g Citrus clementina HOM05D000054 ORTHO05D000171 2.7e-09 65.5 58 53.4
Glyma.12G233000 Glycine max HOM05D000054 ORTHO05D000171 2.7e-09 65.5 61 57.4
Gohir.A01G048900 Gossypium hirsutum HOM05D000054 ORTHO05D000171 2.7e-09 65.5 61 49.2
Rhsim04G0036300 Rhododendron simsii HOM05D000054 ORTHO05D000171 2.7e-09 65.5 62 53.2
vmacro09410 Vaccinium macrocarpon HOM05D000054 ORTHO05D000171 2.7e-09 65.5 59 57.6
CSS0015135 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 3.5e-09 65.1 78 47.4
PGR083G0101 Punica granatum HOM05D000054 ORTHO05D000171 3.5e-09 65.1 60 58.3
COL.COLO4_17487 Corchorus olitorius HOM05D000054 ORTHO05D000171 4.6e-09 64.7 57 56.1
Gohir.D01G039500 Gossypium hirsutum HOM05D000054 ORTHO05D000171 4.6e-09 64.7 61 50.8
Oeu010024.1 Olea europaea HOM05D000054 ORTHO05D015321 4.6e-09 64.7 57 50.9
arahy.Tifrunner.gnm1.ann1.R7UPJF Arachis hypogaea HOM05D000054 ORTHO05D000171 6.0e-09 64.3 61 55.7
Gorai.002G049000 Gossypium raimondii HOM05D000054 ORTHO05D000171 6.0e-09 64.3 61 50.8
RcHm_v2.0_Chr5g0029981 Rosa chinensis HOM05D000054 ORTHO05D000171 7.9e-09 63.9 87 47.1
Eucgr.F01306 Eucalyptus grandis HOM05D000054 ORTHO05D000171 1.0e-08 63.5 61 50.8
Glyma.06G226700 Glycine max HOM05D000054 ORTHO05D000171 1.0e-08 63.5 61 55.7
Ah.04g164070 Amaranthus hybridus HOM05D000054 ORTHO05D000171 1.3e-08 63.2 60 50.0
MD11G1267500 Malus domestica HOM05D000054 ORTHO05D000171 1.3e-08 63.2 60 58.3
Potri.001G385300 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.3e-08 63.2 58 62.1
Eucgr.F01305 Eucalyptus grandis HOM05D000054 ORTHO05D000171 1.8e-08 62.8 61 50.8
Eucgr.F01302 Eucalyptus grandis HOM05D000054 ORTHO05D000171 2.3e-08 62.4 61 50.8
arahy.Tifrunner.gnm1.ann1.SPKK1S Arachis hypogaea HOM05D000054 ORTHO05D000171 3.0e-08 62.0 61 54.1
CiPaw.11G157700 Carya illinoinensis HOM05D000054 ORTHO05D000171 3.0e-08 62.0 89 40.4
CiPaw.11G157800 Carya illinoinensis HOM05D000054 ORTHO05D000171 3.9e-08 61.6 63 54.0
Sed0015607 Sechium edule HOM05D000054 ORTHO05D000171 3.9e-08 61.6 60 51.7
CAN.G292.12 Capsicum annuum HOM05D000054 ORTHO05D000171 6.7e-08 60.8 62 51.6
AUR62039598 Chenopodium quinoa HOM05D000054 ORTHO05D000171 6.7e-08 60.8 60 51.7
Actinidia12597 Actinidia chinensis HOM05D000054 ORTHO05D000171 8.7e-08 60.5 61 52.5
CiPaw.11G158000 Carya illinoinensis HOM05D000054 ORTHO05D000171 8.7e-08 60.5 63 49.2
ECA234G0716 Erigeron canadensis HOM05D000054 ORTHO05D000171 8.7e-08 60.5 60 51.7
ECA236G0246 Erigeron canadensis HOM05D000054 ORTHO05D000171 8.7e-08 60.5 57 52.6
Glyma.12G231800 Glycine max HOM05D000054 ORTHO05D000171 8.7e-08 60.5 61 54.1
SGA_v2.0_scaffold73G24392 Striga asiatica HOM05D000054 ORTHO05D000171 8.7e-08 60.5 61 52.5
Eucgr.L02548 Eucalyptus grandis HOM05D000054 ORTHO05D000171 1.1e-07 60.1 61 47.5
Nn6g34455 Nelumbo nucifera HOM05D000054 ORTHO05D000171 1.1e-07 60.1 70 50.0
GSVIVG01012883001 Vitis vinifera HOM05D000054 ORTHO05D015321 1.1e-07 60.1 45 71.1
CiPaw.11G157900 Carya illinoinensis HOM05D000054 ORTHO05D000171 1.5e-07 59.7 63 49.2
Oeu058463.2 Olea europaea HOM05D000054 ORTHO05D000171 1.5e-07 59.7 60 48.3
Phvul.005G079100 Phaseolus vulgaris HOM05D000054 ORTHO05D000171 1.5e-07 59.7 70 51.4
Solyc12g014350.3 Solanum lycopersicum HOM05D000054 ORTHO05D000171 1.9e-07 59.3 62 50.0
Sopen12g006120 Solanum pennellii HOM05D000054 ORTHO05D000171 1.9e-07 59.3 62 50.0
PGSC0003DMG400015391 Solanum tuberosum HOM05D000054 ORTHO05D000171 2.5e-07 58.9 62 50.0
Eucgr.F04177 Eucalyptus grandis HOM05D000054 ORTHO05D000171 3.3e-07 58.5 61 45.9
TAR626G1348 Trochodendron aralioides HOM05D000054 ORTHO05D000171 3.3e-07 58.5 57 50.9
vmacro09409 Vaccinium macrocarpon HOM05D000054 ORTHO05D000171 3.3e-07 58.5 54 55.6
CiPaw.11G158100 Carya illinoinensis HOM05D000054 ORTHO05D000171 4.3e-07 58.2 63 49.2
Ca_03938_v3 Cicer arietinum L. HOM05D000054 ORTHO05D000171 4.3e-07 58.2 61 50.8
ClCG07G010050 Citrullus lanatus HOM05D000054 ORTHO05D000171 4.3e-07 58.2 61 52.5
Nn3g21042 Nelumbo nucifera HOM05D000054 ORTHO05D000171 4.3e-07 58.2 53 58.5
vmacro09404 Vaccinium macrocarpon HOM05D000054 ORTHO05D000171 4.3e-07 58.2 56 53.6
CsaV3_4G008280 Cucumis sativus L. HOM05D000054 ORTHO05D000171 5.7e-07 57.8 61 50.8
Sed0016500 Sechium edule HOM05D000054 ORTHO05D000171 5.7e-07 57.8 59 52.5
Cpa.g.sc77.44 Carica papaya HOM05D000054 ORTHO05D015321 7.4e-07 57.4 60 53.3
MELO3C016108.2 Cucumis melo HOM05D000054 ORTHO05D000171 7.4e-07 57.4 60 50.0
Dinv15010 Davidia involucrata HOM05D000054 ORTHO05D005077 7.4e-07 57.4 58 56.9
Eucgr.B00963 Eucalyptus grandis HOM05D000054 ORTHO05D000171 7.4e-07 57.4 60 50.0
Nn3g21040 Nelumbo nucifera HOM05D000054 ORTHO05D000171 9.6e-07 57.0 59 52.5
AUR62019624 Chenopodium quinoa HOM05D000054 ORTHO05D000171 1.6e-06 56.2 46 60.9
Eucgr.B00972 Eucalyptus grandis HOM05D000054 ORTHO05D000171 2.1e-06 55.8 60 48.3
Gohir.A04G044400 Gossypium hirsutum HOM05D000054 ORTHO05D000171 2.1e-06 55.8 60 46.7
Lsat_1_v5_gn_7_102080 Lactuca sativa HOM05D000054 ORTHO05D000171 2.1e-06 55.8 61 47.5
PGSC0003DMG400013199 Solanum tuberosum HOM05D000054 ORTHO05D000171 2.1e-06 55.8 63 49.2
THA.LOC104822575 Tarenaya hassleriana HOM05D000054 ORTHO05D000171 2.1e-06 55.8 61 47.5
Eucgr.B00978 Eucalyptus grandis HOM05D000054 ORTHO05D000171 2.8e-06 55.5 60 48.3
Gohir.D05G338700 Gossypium hirsutum HOM05D000054 ORTHO05D000171 2.8e-06 55.5 60 46.7
Gorai.009G363600 Gossypium raimondii HOM05D000054 ORTHO05D000171 2.8e-06 55.5 60 46.7
Nn3g21046 Nelumbo nucifera HOM05D000054 ORTHO05D000171 2.8e-06 55.5 53 56.6
Sabra16G0252200 Salix brachista HOM05D000054 ORTHO05D000171 2.8e-06 55.5 57 49.1
AT1G53440 Arabidopsis thaliana HOM05D000054 ORTHO05D000171 4.8e-06 54.7 63 49.2
TWI38G2264 Tripterygium wilfordii HOM05D000054 ORTHO05D000171 4.8e-06 54.7 61 52.5
Eucgr.F04179 Eucalyptus grandis HOM05D000054 ORTHO05D000171 8.2e-06 53.9 61 44.3


User provided reference genes

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