Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 9.3e-124 446.8 215 100.0
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.6e-107 392.9 215 84.7
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 1.8e-106 389.4 215 83.7
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.8e-106 389.4 215 83.7
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 5.1e-106 387.9 212 84.0
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 5.1e-106 387.9 216 85.2
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 5.1e-106 387.9 214 83.6
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 1.1e-105 386.7 215 83.7
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 6.3e-104 380.9 211 84.4
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 1.1e-103 380.2 212 84.4
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 1.4e-103 379.8 211 84.8
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 2.4e-103 379.0 205 87.8
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 5.3e-103 377.9 215 82.3
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 9.0e-103 377.1 214 83.2
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 1.5e-102 376.3 212 83.0
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.5e-102 376.3 211 84.4
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 1.7e-101 372.9 205 85.4
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 5.0e-101 371.3 211 82.5
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 6.5e-101 370.9 215 82.8
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 7.2e-100 367.5 215 83.7
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 1.2e-99 366.7 199 85.9
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 1.6e-99 366.3 205 83.9
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 4.6e-99 364.8 213 79.3
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 6.1e-99 364.4 198 86.9
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 1.8e-98 362.8 203 81.3
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 2.3e-98 362.5 199 84.4
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 6.7e-98 360.9 214 79.0
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 1.5e-97 359.8 199 84.4
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 1.5e-97 359.8 213 78.4
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 2.5e-97 359.0 203 81.3
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 3.3e-97 358.6 207 80.7
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 5.7e-97 357.8 215 77.2
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 9.7e-97 357.1 210 81.4
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 1.7e-96 356.3 198 85.4
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.7e-96 356.3 207 80.2
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 2.8e-96 355.5 211 80.6
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 3.7e-96 355.1 213 77.5
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.7e-96 355.1 209 81.3
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 4.8e-96 354.8 201 80.6
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 6.3e-96 354.4 201 80.6
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 8.2e-96 354.0 215 78.1
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 1.8e-95 352.8 201 81.1
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 1.8e-95 352.8 201 81.1
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 1.8e-95 352.8 207 79.2
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 1.8e-95 352.8 199 82.4
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 2.4e-95 352.4 199 81.4
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 3.1e-95 352.1 201 80.6
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 4.1e-95 351.7 206 78.2
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 5.3e-95 351.3 201 79.6
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 5.3e-95 351.3 201 79.6
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 5.3e-95 351.3 214 79.9
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 5.3e-95 351.3 205 77.6
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 5.3e-95 351.3 201 79.1
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 6.9e-95 350.9 214 78.5
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 2.0e-94 349.4 202 82.2
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.4e-94 348.6 204 81.9
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 5.9e-94 347.8 198 81.8
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 5.9e-94 347.8 207 78.7
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 7.7e-94 347.4 207 79.7
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 7.7e-94 347.4 200 81.0
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 1.7e-93 346.3 200 79.5
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 2.2e-93 345.9 202 81.2
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 2.2e-93 345.9 201 79.1
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 2.2e-93 345.9 207 78.3
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 3.8e-93 345.1 199 82.9
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 3.8e-93 345.1 203 80.8
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 1.4e-92 343.2 200 79.5
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 2.5e-92 342.4 206 77.7
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 2.5e-92 342.4 201 78.6
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 3.2e-92 342.0 203 79.8
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 3.2e-92 342.0 225 75.6
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 1.6e-91 339.7 209 74.6
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 2.7e-91 339.0 200 79.0
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 2.7e-91 339.0 203 77.3
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 3.6e-91 338.6 203 77.3
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 8.8e-90 334.0 249 65.1
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 4.4e-89 331.6 188 80.9
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 4.4e-89 331.6 215 77.2
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 5.7e-89 331.3 214 72.0
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 5.7e-89 331.3 202 76.2
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 3.7e-88 328.6 207 73.4
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 3.7e-88 328.6 197 76.6
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 1.4e-87 326.6 199 77.9
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.6e-86 323.2 204 74.5
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 4.5e-86 321.6 179 79.3
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 1.3e-85 320.1 202 73.8
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 1.7e-85 319.7 202 76.2
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 5.0e-85 318.2 182 80.8
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 2.5e-84 315.8 198 74.2
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 3.0e-82 308.9 169 84.0
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 1.1e-81 307.0 180 80.6
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 3.3e-81 305.4 170 82.4
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 9.7e-81 303.9 175 82.3
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 1.3e-80 303.5 201 71.1
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 2.8e-80 302.4 205 70.2
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 9.1e-79 297.4 169 83.4
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 1.1e-68 263.8 163 72.4
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 4.2e-68 261.9 201 62.7
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 9.4e-68 260.8 180 71.1
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.5e-65 253.4 139 84.2
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 3.1e-63 245.7 204 60.3
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 3.3e-60 235.7 174 60.3
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 2.8e-59 232.6 198 55.6
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 3.4e-57 225.7 200 52.5
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 2.2e-40 169.9 136 64.7
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 7.1e-39 164.9 160 50.6
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 1.1e-31 141.0 216 41.7
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.3e-28 129.4 75 81.3
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 1.1e-26 124.4 64 87.5
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 5.8e-25 118.6 60 88.3
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 1.4e-23 114.0 170 42.9
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 5.1e-21 105.5 84 65.5
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 2.4e-10 70.1 74 45.9


User provided reference genes

Program Settings