Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01012833001 Vitis vinifera HOM05D000802 ORTHO05D001074 5.7e-46 187.2 92 100.0
Dinv41458 Davidia involucrata HOM05D000802 ORTHO05D001074 7.5e-22 107.1 90 64.4
Cfa002292 Carpinus fangiana HOM05D000802 ORTHO05D001074 3.0e-15 85.1 88 53.4
Haze_25479 Corylus avellana HOM05D000802 ORTHO05D001074 6.8e-15 84.0 88 52.3
Glyma.13G162200 Glycine max HOM05D000802 ORTHO05D001074 1.5e-14 82.8 90 48.9
QL02p090262 Quercus lobata HOM05D000802 ORTHO05D001074 1.5e-14 82.8 84 54.8
CANSAT11G1430 Cannabis sativa HOM05D000802 ORTHO05D001074 1.7e-13 79.3 77 55.8
Duzib168G1852 Durio zibethinus HOM05D000802 ORTHO05D001074 1.4e-12 76.3 92 46.7
RcHm_v2.0_Chr2g0087381 Rosa chinensis HOM05D000802 ORTHO05D001074 1.8e-12 75.9 88 47.7
Cpa.g.sc46.61 Carica papaya HOM05D000802 ORTHO05D001074 4.1e-12 74.7 83 47.0
Nn7g37630 Nelumbo nucifera HOM05D000802 ORTHO05D001074 4.1e-12 74.7 74 54.1
Thecc.09G135100 Theobroma cacao HOM05D000802 ORTHO05D001074 7.0e-12 73.9 88 50.0
Gohir.A06G052700 Gossypium hirsutum HOM05D000802 ORTHO05D001074 9.2e-12 73.6 90 48.9
Ca_21655_v3 Cicer arietinum L. HOM05D000802 ORTHO05D001074 2.0e-11 72.4 88 47.7
Glyma.17G109200 Glycine max HOM05D000802 ORTHO05D001074 2.7e-11 72.0 90 43.3
MSTRG.26340 Avicennia marina HOM05D000802 ORTHO05D001074 3.5e-11 71.6 87 46.0
Gohir.D06G051700 Gossypium hirsutum HOM05D000802 ORTHO05D001074 3.5e-11 71.6 90 47.8
Atru.chr7.1976 Acer truncatum HOM05D000802 ORTHO05D001074 4.5e-11 71.2 81 48.1
Gorai.010G060000 Gossypium raimondii HOM05D000802 ORTHO05D001074 4.5e-11 71.2 90 47.8
Sed0018586 Sechium edule HOM05D000802 ORTHO05D001074 5.9e-11 70.9 91 48.4
CsaV3_2G003230 Cucumis sativus L. HOM05D000802 ORTHO05D001074 1.3e-10 69.7 89 47.2
FAN19G2084 Fragaria x ananassa HOM05D000802 ORTHO05D001074 1.7e-10 69.3 88 47.7
FvH4_1g02420 Fragaria vesca HOM05D000802 ORTHO05D001074 2.3e-10 68.9 88 47.7
Nitab4.5_0002267g0020 Nicotiana tabacum HOM05D000802 ORTHO05D001074 3.8e-10 68.2 86 48.8
Prupe.7G250500 Prunus persica HOM05D000802 ORTHO05D001074 6.6e-10 67.4 83 47.0
FAN28G0142 Fragaria x ananassa HOM05D000802 ORTHO05D001074 8.6e-10 67.0 88 46.6
MBI14_g30732_MAGBIO Magnolia biondii HOM05D000802 ORTHO05D001074 1.5e-09 66.2 90 42.2
Psat4g036320 Pisum sativum HOM05D000802 ORTHO05D001074 2.5e-09 65.5 76 50.0
Sc14g0000140 Simmondsia chinensis HOM05D000802 ORTHO05D001074 3.3e-09 65.1 90 42.2
ClCG11G003380 Citrullus lanatus HOM05D000802 ORTHO05D001074 7.3e-09 63.9 96 43.8
MELO3C004471.2 Cucumis melo HOM05D000802 ORTHO05D001074 7.3e-09 63.9 93 45.2
CAN.G1382.6 Capsicum annuum HOM05D000802 ORTHO05D001074 2.1e-08 62.4 86 46.5
Dinv36463 Davidia involucrata HOM05D000802 ORTHO05D001074 2.8e-08 62.0 61 57.4
Potri.006G063500 Populus trichocarpa HOM05D000802 ORTHO05D001074 2.8e-08 62.0 89 41.6
Sabra06G0046200 Salix brachista HOM05D000802 ORTHO05D001074 2.8e-08 62.0 88 43.2
FAN26G3438 Fragaria x ananassa HOM05D000802 ORTHO05D001074 3.6e-08 61.6 87 43.7
Lalb_Chr12g0198291 Lupinus albus HOM05D000802 ORTHO05D001074 3.6e-08 61.6 69 43.5
Phvul.003G170900 Phaseolus vulgaris HOM05D000802 ORTHO05D001074 4.7e-08 61.2 80 43.8
SGA_v2.0_scaffold63G21798 Striga asiatica HOM05D000802 ORTHO05D001074 4.7e-08 61.2 59 47.5
COL.COLO4_15556 Corchorus olitorius HOM05D000802 ORTHO05D001074 6.1e-08 60.8 87 43.7
Ciclev10007507m.g Citrus clementina HOM05D000802 ORTHO05D001074 8.0e-08 60.5 81 45.7
Medtr4g115710 Medicago truncatula HOM05D000802 ORTHO05D001074 1.0e-07 60.1 88 39.8
EL10Ac8g18757 Beta vulgaris HOM05D000802 ORTHO05D001074 1.4e-07 59.7 87 42.5
Lj9C702G2 Lonicera japonica HOM05D000802 ORTHO05D001074 1.4e-07 59.7 81 45.7
TWI32G0843 Tripterygium wilfordii HOM05D000802 ORTHO05D001074 1.4e-07 59.7 90 45.6
Cc06_g07830 Coffea canephora HOM05D000802 ORTHO05D001074 3.0e-07 58.5 69 47.8
PGSC0003DMG400030710 Solanum tuberosum HOM05D000802 ORTHO05D001074 3.0e-07 58.5 91 45.1
Potri.018G123300 Populus trichocarpa HOM05D000802 ORTHO05D001074 6.8e-07 57.4 78 42.3
arahy.Tifrunner.gnm1.ann1.A528V6 Arachis hypogaea HOM05D000802 ORTHO05D001074 8.9e-07 57.0 69 46.4
Lj4g0027590 Lotus japonicus HOM05D000802 ORTHO05D001074 1.2e-06 56.6 62 45.2
Sopen07g003640 Solanum pennellii HOM05D000802 ORTHO05D001074 1.2e-06 56.6 92 44.6
Lsat_1_v5_gn_8_61381 Lactuca sativa HOM05D000802 ORTHO05D001074 1.5e-06 56.2 84 44.0
Peaxi162Scf00088g01010 Petunia axillaris HOM05D000802 ORTHO05D001074 1.5e-06 56.2 84 44.0
arahy.Tifrunner.gnm1.ann1.R7M19X Arachis hypogaea HOM05D000802 ORTHO05D001074 2.6e-06 55.5 69 44.9
PGR031G2974 Punica granatum HOM05D000802 ORTHO05D001074 2.6e-06 55.5 86 41.9
AUR62013286 Chenopodium quinoa HOM05D000802 ORTHO05D001074 4.4e-06 54.7 83 39.8
AUR62011201 Chenopodium quinoa HOM05D000802 ORTHO05D001074 5.7e-06 54.3 83 39.8
ECA236G1679 Erigeron canadensis HOM05D000802 ORTHO05D001074 5.7e-06 54.3 75 48.0
Sabra18G0105000 Salix brachista HOM05D000802 ORTHO05D001074 9.8e-06 53.5 76 40.8


User provided reference genes

Program Settings