Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01012804001 Vitis vinifera HOM05D005191 ORTHO05D006725 2.1e-42 175.3 87 100.0
Cpa.g.sc46.51 Carica papaya HOM05D005191 ORTHO05D006725 3.8e-15 84.7 66 63.6
COL.COLO4_15579 Corchorus olitorius HOM05D005191 ORTHO05D006725 6.4e-15 84.0 67 62.7
Dinv41468 Davidia involucrata HOM05D005191 ORTHO05D006725 6.4e-15 84.0 66 63.6
Glyma.13G160800 Glycine max HOM05D005191 ORTHO05D006725 8.4e-15 83.6 57 71.9
Phvul.003G169500 Phaseolus vulgaris HOM05D005191 ORTHO05D006725 1.1e-14 83.2 54 74.1
Cfa002299 Carpinus fangiana HOM05D005191 ORTHO05D006725 1.4e-14 82.8 66 62.1
VMungo1215G2132 Vigna mungo HOM05D005191 ORTHO05D006725 2.4e-14 82.0 54 72.2
Lj4g0015768 Lotus japonicus HOM05D005191 ORTHO05D006725 3.2e-14 81.6 66 62.1
Glyma.17G110600 Glycine max HOM05D005191 ORTHO05D006725 4.2e-14 81.3 57 70.2
Cc06_g08000 Coffea canephora HOM05D005191 ORTHO05D006725 9.2e-14 80.1 55 70.9
Cc06_g08010 Coffea canephora HOM05D005191 ORTHO05D006725 9.2e-14 80.1 55 70.9
Gohir.D08G100100 Gossypium hirsutum HOM05D005191 ORTHO05D006725 1.2e-13 79.7 67 61.2
Gorai.004G107900 Gossypium raimondii HOM05D005191 ORTHO05D006725 1.2e-13 79.7 67 61.2
Sed0022210 Sechium edule HOM05D005191 ORTHO05D006725 1.2e-13 79.7 61 65.6
AL3G44790 Arabidopsis lyrata HOM05D005191 ORTHO05D006725 2.1e-13 79.0 63 63.5
Atru.chr7.1956 Acer truncatum HOM05D005191 ORTHO05D006725 3.5e-13 78.2 60 65.0
CSS0021683 Camellia sinensis var. sinensis HOM05D005191 ORTHO05D006725 3.5e-13 78.2 52 71.2
Lalb_Chr12g0198261 Lupinus albus HOM05D005191 ORTHO05D006725 3.5e-13 78.2 68 58.8
Sp3g26260 Schrenkiella parvula HOM05D005191 ORTHO05D006725 6.0e-13 77.4 53 71.7
Actinidia26371 Actinidia chinensis HOM05D005191 ORTHO05D006725 1.0e-12 76.6 52 69.2
Ciclev10007583m.g Citrus clementina HOM05D005191 ORTHO05D006725 1.0e-12 76.6 66 56.1
MELO3C010304.2 Cucumis melo HOM05D005191 ORTHO05D006725 1.0e-12 76.6 67 59.7
Gohir.A08G088900 Gossypium hirsutum HOM05D005191 ORTHO05D006725 1.0e-12 76.6 67 59.7
Thecc.09G133700 Theobroma cacao HOM05D005191 ORTHO05D006725 1.3e-12 76.3 67 56.7
CARHR104890 Cardamine hirsuta HOM05D005191 ORTHO05D006725 1.7e-12 75.9 53 69.8
ClCG06G011590 Citrullus lanatus HOM05D005191 ORTHO05D006725 1.7e-12 75.9 63 58.7
Lsat_1_v5_gn_8_61061 Lactuca sativa HOM05D005191 ORTHO05D006725 1.7e-12 75.9 62 67.7
THA.LOC104826555 Tarenaya hassleriana HOM05D005191 ORTHO05D006725 2.3e-12 75.5 67 59.7
CANSAT11G2540 Cannabis sativa HOM05D005191 ORTHO05D006725 3.0e-12 75.1 49 71.4
arahy.Tifrunner.gnm1.ann1.0L2UMW Arachis hypogaea HOM05D005191 ORTHO05D006725 3.9e-12 74.7 51 68.6
arahy.Tifrunner.gnm1.ann1.W0WM15 Arachis hypogaea HOM05D005191 ORTHO05D006725 3.9e-12 74.7 51 68.6
Eucgr.E03534 Eucalyptus grandis HOM05D005191 ORTHO05D006725 3.9e-12 74.7 51 70.6
FAN23G0864 Fragaria x ananassa HOM05D005191 ORTHO05D006725 3.9e-12 74.7 66 62.1
Manes.06G046300 Manihot esculenta HOM05D005191 ORTHO05D006725 3.9e-12 74.7 61 62.3
Duzib150G0407 Durio zibethinus HOM05D005191 ORTHO05D006725 5.1e-12 74.3 67 59.7
Medtr4g115450 Medicago truncatula HOM05D005191 ORTHO05D006725 5.1e-12 74.3 58 62.1
Sopen07g001100 Solanum pennellii HOM05D005191 ORTHO05D006725 5.1e-12 74.3 60 63.3
QL02p090053 Quercus lobata HOM05D005191 ORTHO05D006725 6.6e-12 73.9 52 65.4
Solyc07g007810.3 Solanum lycopersicum HOM05D005191 ORTHO05D006725 6.6e-12 73.9 55 63.6
CiPaw.03G249200 Carya illinoinensis HOM05D005191 ORTHO05D006725 8.7e-12 73.6 66 56.1
PGR142G3543 Punica granatum HOM05D005191 ORTHO05D006725 8.7e-12 73.6 44 75.0
TAR625G1134 Trochodendron aralioides HOM05D005191 ORTHO05D006725 8.7e-12 73.6 62 61.3
Ca_21665_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 1.1e-11 73.2 46 73.9
CsaV3_1G027890 Cucumis sativus L. HOM05D005191 ORTHO05D006725 1.1e-11 73.2 50 68.0
Migut.K00420 Erythranthe guttata HOM05D005191 ORTHO05D006725 1.1e-11 73.2 66 53.0
Nitab4.5_0005159g0020 Nicotiana tabacum HOM05D005191 ORTHO05D006725 1.1e-11 73.2 52 65.4
TPR.G8947 Trifolium pratense HOM05D005191 ORTHO05D006725 1.1e-11 73.2 46 73.9
FAN26G1428 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.5e-11 72.8 55 65.5
Sp3g26280 Schrenkiella parvula HOM05D005191 ORTHO05D012938 1.5e-11 72.8 65 61.5
Aa31LG8G12200 Aethionema arabicum HOM05D005191 ORTHO05D006725 1.9e-11 72.4 47 72.3
Haze_25489 Corylus avellana HOM05D005191 ORTHO05D006725 1.9e-11 72.4 77 55.8
Prupe.7G249300 Prunus persica HOM05D005191 ORTHO05D006725 1.9e-11 72.4 66 56.1
FAN19G1407 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.5e-11 72.0 55 65.5
FAN28G1162 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.5e-11 72.0 55 65.5
CAN.G1663.1 Capsicum annuum HOM05D005191 ORTHO05D006725 4.3e-11 71.2 60 58.3
FvH4_1g02530 Fragaria vesca HOM05D005191 ORTHO05D006725 5.6e-11 70.9 55 63.6
BcaB02g10775 Brassica carinata HOM05D005191 ORTHO05D006725 7.3e-11 70.5 45 73.3
Nn2g12129 Nelumbo nucifera HOM05D005191 ORTHO05D006725 7.3e-11 70.5 65 56.9
TWI32G0152 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 7.3e-11 70.5 73 50.7
TWI63G0111 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 7.3e-11 70.5 73 50.7
MD15G1165500 Malus domestica HOM05D005191 ORTHO05D006725 9.6e-11 70.1 46 71.7
Psat4g036440 Pisum sativum HOM05D005191 ORTHO05D006725 9.6e-11 70.1 59 59.3
RcHm_v2.0_Chr2g0087561 Rosa chinensis HOM05D005191 ORTHO05D006725 9.6e-11 70.1 55 61.8
AT2G11000 Arabidopsis thaliana HOM05D005191 ORTHO05D006725 1.3e-10 69.7 50 72.0
Potri.006G065000 Populus trichocarpa HOM05D005191 ORTHO05D006725 1.6e-10 69.3 49 65.3
Sc18g0000280 Simmondsia chinensis HOM05D005191 ORTHO05D006725 1.6e-10 69.3 66 51.5
Peaxi162Scf00088g01225 Petunia axillaris HOM05D005191 ORTHO05D006725 2.8e-10 68.6 47 68.1
Potri.018G125171 Populus trichocarpa HOM05D005191 ORTHO05D006725 2.8e-10 68.6 71 49.3
Potri.T124807 Populus trichocarpa HOM05D005191 ORTHO05D006725 2.8e-10 68.6 71 49.3
HanXRQChr05g0143851 Helianthus annuus HOM05D005191 ORTHO05D006725 3.6e-10 68.2 47 68.1
BcaC01g02222 Brassica carinata HOM05D005191 ORTHO05D006725 4.8e-10 67.8 45 71.1
A06p26710 Brassica napus HOM05D005191 ORTHO05D006725 4.8e-10 67.8 45 71.1
C03p67700 Brassica napus HOM05D005191 ORTHO05D006725 4.8e-10 67.8 45 71.1
BolSC21t60229H Brassica oleracea HOM05D005191 ORTHO05D006725 4.8e-10 67.8 45 71.1
BraA06t25606Z Brassica rapa HOM05D005191 ORTHO05D006725 4.8e-10 67.8 45 71.1
PSO170G6846 Papaver somniferum HOM05D005191 ORTHO05D006725 4.8e-10 67.8 56 60.7
Psat6g224720 Pisum sativum HOM05D005191 ORTHO05D006725 4.8e-10 67.8 54 57.4
MD02G1022800 Malus domestica HOM05D005191 ORTHO05D006725 8.1e-10 67.0 46 69.6
PSO017G2350 Papaver somniferum HOM05D005191 ORTHO05D006725 1.1e-09 66.6 56 58.9
Carub.0003s2755 Capsella rubella HOM05D005191 ORTHO05D006725 1.4e-09 66.2 47 68.1
DCAR_009327 Daucus carota HOM05D005191 ORTHO05D006725 1.8e-09 65.9 48 64.6
EL10Ac8g18733 Beta vulgaris HOM05D005191 ORTHO05D006725 2.4e-09 65.5 61 52.5
Aqoxy7G02403 Aquilegia oxysepala HOM05D005191 ORTHO05D006725 3.1e-09 65.1 42 71.4
CDE05G1862 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 3.1e-09 65.1 60 53.3
AUR62011184 Chenopodium quinoa HOM05D005191 ORTHO05D006725 3.1e-09 65.1 49 61.2
Hund26552 Selenicereus undatus HOM05D005191 ORTHO05D006725 3.1e-09 65.1 52 61.5
HPP92_010843 Vanilla planifolia HOM05D005191 ORTHO05D006725 9.0e-09 63.5 66 51.5
AUR62013300 Chenopodium quinoa HOM05D005191 ORTHO05D006725 1.2e-08 63.2 65 50.8
SGA_v2.0_scaffold63G21813 Striga asiatica HOM05D005191 ORTHO05D006725 1.2e-08 63.2 66 53.0
ECA236G3625 Erigeron canadensis HOM05D005191 ORTHO05D006725 2.0e-08 62.4 43 65.1
MSTRG.26350 Avicennia marina HOM05D005191 ORTHO05D006725 2.6e-08 62.0 52 59.6
Zm00001eb192130 Zea mays HOM05D005191 ORTHO05D006725 2.6e-08 62.0 51 56.9
SEGI_14008 Sequoiadendron giganteum HOM05D005191 ORTHO05D006725 3.4e-08 61.6 49 57.1
Sabra18G0106500 Salix brachista HOM05D005191 ORTHO05D006725 1.3e-07 59.7 93 39.8
Ah.14g079340 Amaranthus hybridus HOM05D005191 ORTHO05D006725 1.7e-07 59.3 50 52.0
Rhsim03G0251800 Rhododendron simsii HOM05D005191 ORTHO05D006725 1.7e-07 59.3 84 40.5
Os02g0803250 Oryza sativa ssp. japonica HOM05D005191 ORTHO05D006725 4.9e-07 57.8 41 61.0
Pp3c26_8550 Physcomitrium patens HOM05D005191 ORTHO05D006725 4.2e-06 54.7 48 45.8
Mapoly0005s0239 Marchantia polymorpha HOM05D005191 ORTHO05D006725 5.4e-06 54.3 49 53.1


User provided reference genes

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