Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 1.8e-309 1065.1 530 100.0
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 3.7e-230 801.6 529 79.8
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 4.8e-230 801.2 548 77.7
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 1.1e-226 790.0 558 74.9
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 1.4e-226 789.6 557 76.1
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.4e-226 789.6 544 76.3
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 3.6e-225 785.0 507 80.7
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 4.6e-225 784.6 529 77.5
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.3e-222 776.5 544 74.6
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 1.3e-219 766.5 548 74.8
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.2e-219 765.8 535 75.9
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 3.8e-219 765.0 450 85.3
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 3.2e-218 761.9 538 73.8
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 2.7e-217 758.8 534 74.0
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 3.6e-217 758.4 555 72.1
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 6.1e-217 757.7 494 78.5
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 6.1e-217 757.7 502 77.9
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 2.3e-216 755.7 558 71.3
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 2.3e-216 755.7 415 89.6
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 2.0e-215 752.7 536 73.7
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 4.3e-215 751.5 518 74.7
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 2.8e-214 748.8 530 74.3
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 1.8e-213 746.1 518 74.3
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 6.9e-213 744.2 553 72.2
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 3.4e-212 741.9 420 86.7
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 3.4e-212 741.9 450 82.4
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 1.0e-211 740.3 432 84.0
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 2.9e-211 738.8 530 74.0
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 6.5e-211 737.6 519 75.7
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 8.5e-211 737.3 518 74.7
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 2.5e-210 735.7 518 74.1
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 4.2e-210 734.9 543 70.0
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 9.4e-210 733.8 449 81.3
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 1.6e-209 733.0 525 73.0
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 2.7e-209 732.3 447 81.7
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 3.6e-209 731.9 545 72.3
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 4.7e-209 731.5 518 74.1
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 1.0e-208 730.3 533 71.5
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 3.0e-208 728.8 557 69.3
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 8.8e-208 727.2 459 79.3
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 1.1e-207 726.9 555 69.0
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 1.1e-207 726.9 533 71.1
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 2.0e-207 726.1 544 70.8
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 3.3e-207 725.3 510 74.9
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 7.4e-207 724.2 537 71.1
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 1.7e-206 723.0 537 70.8
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 6.3e-206 721.1 534 72.1
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 1.1e-205 720.3 539 71.8
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 1.1e-205 720.3 499 73.9
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 2.4e-205 719.2 551 69.1
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 9.1e-205 717.2 500 75.4
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 2.0e-204 716.1 531 70.8
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 3.5e-204 715.3 516 72.5
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 7.7e-204 714.1 537 71.5
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 1.0e-203 713.8 557 68.4
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 1.3e-203 713.4 462 78.1
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 2.2e-203 712.6 560 69.3
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 3.8e-203 711.8 466 79.0
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 5.0e-203 711.4 470 76.8
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 5.0e-203 711.4 442 80.3
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 6.5e-203 711.1 482 75.1
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.9e-202 709.5 553 67.3
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 2.5e-202 709.1 502 74.5
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 5.5e-202 708.0 543 68.3
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 7.2e-202 707.6 436 78.9
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.1e-201 706.1 555 66.8
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 2.7e-201 705.7 534 69.3
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 6.1e-201 704.5 495 77.0
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 1.4e-200 703.4 545 68.1
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 3.0e-200 702.2 517 71.8
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 5.2e-200 701.4 511 71.6
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 8.8e-200 700.7 507 71.4
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 4.4e-199 698.4 553 66.7
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 5.7e-199 698.0 554 66.6
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 1.3e-198 696.8 439 79.0
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 1.7e-198 696.4 488 72.3
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 2.2e-198 696.0 532 68.4
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 2.8e-198 695.7 435 80.2
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 3.7e-198 695.3 487 73.3
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 3.7e-198 695.3 447 79.0
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 6.3e-198 694.5 413 83.1
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 6.3e-198 694.5 571 66.0
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 1.4e-197 693.3 523 69.8
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 1.8e-197 693.0 494 72.7
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 2.4e-197 692.6 409 83.4
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 5.3e-197 691.4 545 66.4
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 9.1e-197 690.6 529 68.1
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.2e-196 690.3 422 80.6
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 7.7e-196 687.6 515 71.1
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 7.7e-196 687.6 508 69.9
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 1.0e-195 687.2 505 72.1
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 1.3e-195 686.8 509 72.1
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 2.2e-195 686.0 549 67.2
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 6.5e-195 684.5 453 76.2
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 1.1e-194 683.7 534 68.9
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 5.5e-194 681.4 486 71.8
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 2.1e-193 679.5 487 72.3
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 2.1e-193 679.5 446 77.4
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 3.6e-193 678.7 545 67.2
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 4.7e-193 678.3 490 70.8
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 1.4e-192 676.8 495 70.9
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 1.8e-192 676.4 490 70.4
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 2.3e-192 676.0 490 71.0
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 3.0e-192 675.6 490 71.0
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 5.2e-192 674.9 407 82.1
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 5.2e-192 674.9 407 82.1
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 1.2e-191 673.7 490 70.2
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 1.2e-191 673.7 482 72.0
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 4.4e-191 671.8 456 75.7
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 4.4e-191 671.8 505 68.3
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 7.5e-191 671.0 413 81.4
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 2.8e-190 669.1 542 66.1
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 4.8e-190 668.3 537 65.5
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 2.4e-189 666.0 539 66.4
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 3.1e-189 665.6 531 68.0
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 5.4e-189 664.8 482 71.2
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 7.0e-189 664.5 531 67.6
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 5.9e-188 661.4 513 67.8
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 7.7e-188 661.0 415 81.4
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 2.2e-187 659.4 549 63.9
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 3.2e-186 655.6 405 79.8
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 7.2e-186 654.4 448 74.1
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 1.6e-185 653.3 492 70.1
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 1.6e-185 653.3 492 70.1
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 1.6e-185 653.3 492 70.1
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 1.6e-185 653.3 448 73.9
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 6.1e-185 651.4 531 65.9
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 5.2e-184 648.3 485 69.7
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 2.0e-183 646.4 389 82.8
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 2.8e-182 642.5 512 65.8
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 2.0e-180 636.3 395 79.2
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 7.7e-180 634.4 498 65.1
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.5e-178 630.2 363 85.7
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 4.9e-174 615.1 444 73.4
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 2.1e-169 599.7 404 73.8
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 3.0e-163 579.3 499 64.5
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 3.1e-152 542.7 438 63.9
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 2.4e-149 533.1 357 72.5
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 4.1e-149 532.3 378 74.1
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 2.7e-148 529.6 471 59.4
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 3.0e-147 526.2 462 61.0
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 8.4e-134 481.5 305 75.1
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 4.2e-133 479.2 379 64.6
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 2.3e-99 367.1 209 82.3
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 3.1e-96 356.7 382 51.0
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.6e-95 353.6 335 58.5
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 1.9e-93 347.4 197 82.2
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 1.5e-82 311.2 180 80.0
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 6.5e-78 295.8 159 86.8
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 1.1e-77 295.0 156 88.5
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 1.1e-77 295.0 156 88.5
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 7.2e-77 292.4 227 66.5
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 6.1e-68 262.7 391 42.5
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 1.4e-64 251.5 363 39.9
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.5e-61 241.5 172 73.8
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.2e-52 211.8 127 84.3
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 5.2e-51 206.5 182 54.9
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 3.0e-46 190.7 291 36.8
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 2.8e-44 184.1 189 53.4
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 2.9e-41 174.1 109 76.1
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 1.2e-34 152.1 100 77.0
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 1.2e-34 152.1 110 65.5
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 5.8e-34 149.8 158 53.8
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.3e-33 148.7 88 77.3
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 3.2e-32 144.1 210 37.6
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 1.3e-30 138.7 130 58.5
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 6.6e-30 136.3 83 72.3
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 3.3e-29 134.0 83 71.1
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 8.7e-22 109.4 122 51.6
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 1.5e-21 108.6 100 59.0
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 4.5e-18 97.1 92 57.6
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 2.1e-15 88.2 158 43.0
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 1.8e-14 85.1 175 34.9
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 1.3e-12 79.0 41 95.1
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 2.4e-11 74.7 111 41.4
TAR624G1033 Trochodendron aralioides HOM05D003880 ORTHO05D415972 2.0e-10 71.6 138 40.6
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 4.5e-10 70.5 64 62.5
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 2.3e-06 58.2 32 78.1


User provided reference genes

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