Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 0.0e+00 1401.0 708 100.0
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 4.3e-226 788.5 709 58.8
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 2.9e-198 696.0 720 52.5
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 7.9e-196 688.0 710 52.5
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 9.3e-189 664.5 713 51.2
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 3.5e-188 662.5 715 52.4
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 1.7e-177 627.1 690 52.2
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 5.3e-176 622.1 680 51.2
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 1.7e-169 600.5 707 48.1
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 1.2e-164 584.3 770 46.1
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 1.1e-162 577.8 702 48.4
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 1.4e-160 570.9 695 46.5
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 5.9e-159 565.5 720 46.7
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 2.9e-158 563.1 703 45.4
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 6.5e-158 562.0 706 44.9
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 2.5e-157 560.1 706 45.0
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 3.6e-156 556.2 713 44.6
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 2.2e-153 547.0 707 45.4
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 8.3e-153 545.0 711 44.7
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 8.3e-153 545.0 704 44.0
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 3.5e-151 539.7 700 46.0
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 1.9e-149 533.9 713 44.0
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 4.7e-148 529.3 717 43.1
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.5e-146 524.2 709 45.1
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 5.7e-146 522.3 709 44.7
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.2e-145 520.4 711 44.9
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 4.9e-145 519.2 711 44.7
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 8.3e-145 518.5 700 44.3
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.0e-143 513.8 711 44.7
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 2.3e-142 510.4 713 44.7
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 5.6e-141 505.8 712 44.2
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 7.3e-141 505.4 712 43.4
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 2.1e-140 503.8 717 43.9
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 2.8e-140 503.4 710 42.4
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 4.7e-140 502.7 649 46.2
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 6.1e-140 502.3 718 43.9
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 6.1e-140 502.3 717 43.9
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 1.0e-139 501.5 712 42.3
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 1.8e-139 500.7 713 43.5
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 5.4e-136 489.2 709 42.6
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 8.6e-134 481.9 556 48.9
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 5.2e-131 472.6 707 40.6
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 4.4e-130 469.5 665 42.6
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 1.2e-127 461.5 711 39.8
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 4.6e-127 459.5 722 41.0
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 1.9e-125 454.1 708 40.4
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 2.5e-125 453.8 650 45.2
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 7.3e-125 452.2 712 39.5
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 1.3e-118 431.4 711 39.2
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 1.9e-117 427.6 697 39.6
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 1.6e-116 424.5 665 39.8
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 1.9e-112 411.0 666 39.3
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 3.2e-112 410.2 698 39.7
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 3.5e-111 406.8 694 39.3
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 1.7e-110 404.4 710 36.9
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 1.4e-107 394.8 693 36.8
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 2.6e-106 390.6 704 37.4
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 3.2e-104 383.6 480 45.4
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 1.2e-103 381.7 600 40.7
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 7.8e-103 379.0 704 36.2
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 1.7e-102 377.9 701 36.9
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 3.9e-102 376.7 751 37.2
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 2.8e-100 370.5 702 35.6
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 6.2e-100 369.4 706 36.4
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 3.1e-99 367.1 523 44.2
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 2.0e-98 364.4 707 37.2
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 8.4e-97 359.0 701 36.4
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 7.1e-96 355.9 493 43.2
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 6.0e-95 352.8 583 38.6
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 7.9e-95 352.4 705 34.9
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 1.8e-94 351.3 763 33.7
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 3.3e-93 347.1 703 34.1
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 4.9e-89 333.2 718 33.4
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 1.4e-88 331.6 556 38.5
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 1.9e-88 331.3 726 33.6
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 5.5e-88 329.7 721 33.4
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 1.3e-86 325.1 701 32.4
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 4.8e-84 316.6 708 34.9
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 8.2e-84 315.8 701 35.8
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 8.2e-84 315.8 722 33.1
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 1.4e-83 315.1 705 34.6
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 3.4e-82 310.5 723 33.7
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 4.5e-82 310.1 723 33.6
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 4.5e-82 310.1 723 33.6
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 2.9e-81 307.4 728 34.1
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 3.9e-78 297.0 702 33.3
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 2.5e-77 294.3 567 38.3
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 1.4e-75 288.5 719 31.4
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 1.0e-70 272.3 544 36.0
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 5.1e-70 270.0 543 36.1
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 6.7e-70 269.6 536 36.0
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 8.7e-70 269.2 710 29.9
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 9.7e-69 265.8 675 29.8
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.8e-67 261.5 719 29.3
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 1.0e-65 255.8 315 46.7
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 3.2e-64 250.8 728 30.1
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 2.3e-62 244.6 717 30.5
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 6.3e-60 236.5 547 30.3
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 4.7e-55 220.3 415 38.1
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 1.4e-46 192.2 687 24.9
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 2.2e-36 158.3 739 25.6
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 1.6e-31 142.1 263 40.7
Cpa.g.c34985.1 Carica papaya HOM05D006728 ORTHO05D007911 1.6e-26 125.6 197 41.1
Cfa008144 Carpinus fangiana HOM05D006728 ORTHO05D007911 1.1e-24 119.4 98 58.2
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 3.3e-24 117.9 138 48.6
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 7.3e-24 116.7 132 47.0
Glyma.20G198732 Glycine max HOM05D006728 ORTHO05D007911 2.0e-21 108.6 152 43.4
Os02g0461200 Oryza sativa ssp. japonica HOM05D006728 ORTHO05D007911 4.4e-21 107.5 541 25.0
Zm00001eb295040 Zea mays HOM05D006728 ORTHO05D007911 3.5e-18 97.8 598 22.7
CDE05G2798 Ceratophyllum demersum HOM05D006728 ORTHO05D007911 1.9e-16 92.0 134 38.8
Prupe.8G015600 Prunus persica HOM05D025481 ORTHO05D007911 1.4e-14 85.9 312 28.2
Glyma.20G198666 Glycine max HOM05D006728 ORTHO05D007911 4.0e-14 84.3 178 32.6
RcHm_v2.0_Chr5g0040361 Rosa chinensis HOM05D006728 ORTHO05D007911 1.1e-11 76.3 101 47.5
SHI29297 Sapria himalayana HOM05D006728 ORTHO05D007911 1.2e-10 72.8 71 50.7
SEGI_13134 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 7.8e-10 70.1 270 25.6
SEGI_31214 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 1.0e-09 69.7 117 35.0
SEGI_21354 Sequoiadendron giganteum HOM05D013057 ORTHO05D019366 1.9e-08 65.5 114 34.2
SEGI_21949 Sequoiadendron giganteum HOM05D013057 ORTHO05D019366 2.8e-07 61.6 119 31.9
SEGI_13916 Sequoiadendron giganteum HOM05D013057 ORTHO05D019366 3.6e-07 61.2 114 33.3
Aqoxy1G01188 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 1.4e-06 59.3 81 43.2
SEGI_33709 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 2.3e-06 58.5 102 33.3
SEGI_12178 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 4.0e-06 57.8 102 33.3


User provided reference genes

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