Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01012731001 Vitis vinifera HOM05D000355 ORTHO05D000227 3.3e-40 167.9 86 100.0
GSVIVG01012733001 Vitis vinifera HOM05D000355 ORTHO05D000227 4.0e-25 117.9 59 98.3
Dinv13886 Davidia involucrata HOM05D001857 ORTHO05D004244 2.0e-16 89.0 52 82.7
CiPaw.09G091200 Carya illinoinensis HOM05D000355 ORTHO05D000227 2.8e-15 85.1 56 76.8
Nn1g03533 Nelumbo nucifera HOM05D000355 ORTHO05D000227 4.1e-14 81.3 59 67.8
TAR626G1224 Trochodendron aralioides HOM05D000355 ORTHO05D000227 5.4e-14 80.9 52 75.0
TAR624G0410 Trochodendron aralioides HOM05D000355 ORTHO05D000227 1.6e-13 79.3 52 75.0
Gohir.D10G012700 Gossypium hirsutum HOM05D000355 ORTHO05D000227 1.3e-12 76.3 52 73.1
CiPaw.10G070600 Carya illinoinensis HOM05D000355 ORTHO05D000227 2.3e-12 75.5 64 67.2
Thecc.06G219800 Theobroma cacao HOM05D000355 ORTHO05D000227 2.3e-12 75.5 52 73.1
Duzib235G0252 Durio zibethinus HOM05D000355 ORTHO05D000227 2.9e-12 75.1 52 71.2
Nitab4.5_0000389g0020 Nicotiana tabacum HOM05D000355 ORTHO05D000227 2.9e-12 75.1 53 67.9
CSS0010485 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 3.8e-12 74.7 47 78.7
Ciclev10016695m.g Citrus clementina HOM05D000355 ORTHO05D000227 3.8e-12 74.7 53 67.9
Gorai.011G014400 Gossypium raimondii HOM05D000355 ORTHO05D000227 5.0e-12 74.3 52 71.2
Cpa.g.sc152.10 Carica papaya HOM05D000355 ORTHO05D000227 6.6e-12 73.9 54 64.8
Duzib160G0644 Durio zibethinus HOM05D000355 ORTHO05D000227 6.6e-12 73.9 52 69.2
COL.COLO4_31766 Corchorus olitorius HOM05D000355 ORTHO05D000227 1.5e-11 72.8 53 73.6
MELO3C007387.2 Cucumis melo HOM05D000355 ORTHO05D000227 1.5e-11 72.8 53 71.7
CsaV3_6G049080 Cucumis sativus L. HOM05D000355 ORTHO05D000227 1.5e-11 72.8 53 71.7
Manes.17G038700 Manihot esculenta HOM05D000355 ORTHO05D000227 1.5e-11 72.8 54 68.5
Actinidia11851 Actinidia chinensis HOM05D000355 ORTHO05D000227 1.9e-11 72.4 57 61.4
Gohir.D05G173100 Gossypium hirsutum HOM05D000355 ORTHO05D000227 2.5e-11 72.0 53 66.0
Gorai.009G178300 Gossypium raimondii HOM05D000355 ORTHO05D000227 2.5e-11 72.0 53 66.0
Gohir.A10G012800 Gossypium hirsutum HOM05D000355 ORTHO05D000227 3.3e-11 71.6 52 69.2
TAR627G1061 Trochodendron aralioides HOM05D000355 ORTHO05D000227 3.3e-11 71.6 61 59.0
Gohir.A05G170000 Gossypium hirsutum HOM05D000355 ORTHO05D000227 7.2e-11 70.5 53 64.2
Manes.16G007600 Manihot esculenta HOM05D000355 ORTHO05D000227 9.5e-11 70.1 47 78.7
Nn024s41557 Nelumbo nucifera HOM05D000355 ORTHO05D000227 9.5e-11 70.1 52 67.3
Peaxi162Scf00331g00061 Petunia axillaris HOM05D000355 ORTHO05D000227 9.5e-11 70.1 53 64.2
MSTRG.13144 Avicennia marina HOM05D000355 ORTHO05D000227 1.2e-10 69.7 50 66.0
CANSAT56G1471 Cannabis sativa HOM05D000355 ORTHO05D000227 1.2e-10 69.7 60 65.0
Peaxi162Scf00262g00123 Petunia axillaris HOM05D000355 ORTHO05D000227 1.2e-10 69.7 53 66.0
Lsat_1_v5_gn_4_60620 Lactuca sativa HOM05D000355 ORTHO05D000227 1.6e-10 69.3 54 68.5
Oeu013639.1 Olea europaea HOM05D000355 ORTHO05D000227 1.6e-10 69.3 59 64.4
QL05p073277 Quercus lobata HOM05D000355 ORTHO05D000227 1.6e-10 69.3 48 79.2
Gohir.A09G069100 Gossypium hirsutum HOM05D000355 ORTHO05D000227 2.8e-10 68.6 56 64.3
Gohir.D09G069000 Gossypium hirsutum HOM05D000355 ORTHO05D000227 2.8e-10 68.6 52 65.4
Gorai.006G083200 Gossypium raimondii HOM05D000355 ORTHO05D000227 2.8e-10 68.6 52 65.4
Duzib192G1078 Durio zibethinus HOM05D000355 ORTHO05D000227 4.7e-10 67.8 52 69.2
Actinidia26918 Actinidia chinensis HOM05D000355 ORTHO05D000227 6.1e-10 67.4 49 65.3
Potri.004G015700 Populus trichocarpa HOM05D000355 ORTHO05D000227 6.1e-10 67.4 53 69.8
Haze_06796 Corylus avellana HOM05D000355 ORTHO05D000227 8.0e-10 67.0 56 67.9
Migut.H01570 Erythranthe guttata HOM05D000355 ORTHO05D000227 8.0e-10 67.0 46 76.1
Nitab4.5_0006137g0010 Nicotiana tabacum HOM05D000355 ORTHO05D000227 8.0e-10 67.0 53 64.2
Potri.011G003300 Populus trichocarpa HOM05D000355 ORTHO05D000227 8.0e-10 67.0 53 69.8
Cfa000230 Carpinus fangiana HOM05D000355 ORTHO05D000227 1.0e-09 66.6 56 67.9
CSS0035426 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 1.4e-09 66.2 57 64.9
Nitab4.5_0011951g0010 Nicotiana tabacum HOM05D000355 ORTHO05D000227 1.4e-09 66.2 52 61.5
Sed0010791 Sechium edule HOM05D000355 ORTHO05D000227 1.4e-09 66.2 110 40.9
Oeu033200.1 Olea europaea HOM05D000355 ORTHO05D000227 1.8e-09 65.9 53 62.3
Sabra04G0007900 Salix brachista HOM05D000355 ORTHO05D000227 2.3e-09 65.5 55 65.5
Sed0025693 Sechium edule HOM05D000355 ORTHO05D000227 2.3e-09 65.5 76 53.9
Ca_00653_v3 Cicer arietinum L. HOM05D000355 ORTHO05D000227 3.0e-09 65.1 51 64.7
ClCG01G022020 Citrullus lanatus HOM05D000355 ORTHO05D000227 3.0e-09 65.1 53 66.0
Rhsim13G0154400 Rhododendron simsii HOM05D000355 ORTHO05D000227 3.0e-09 65.1 52 69.2
Sed0010808 Sechium edule HOM05D000355 ORTHO05D000227 3.0e-09 65.1 45 73.3
Atru.chr10.2215 Acer truncatum HOM05D000355 ORTHO05D000227 4.0e-09 64.7 54 61.1
Hma1.2p1_1047F.1_g251600 Hydrangea macrophylla HOM05D000355 ORTHO05D000227 8.9e-09 63.5 51 64.7
MD05G1345500 Malus domestica HOM05D000355 ORTHO05D000227 8.9e-09 63.5 53 64.2
MD10G1320900 Malus domestica HOM05D000355 ORTHO05D000227 8.9e-09 63.5 53 64.2
TWI38G1631 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 8.9e-09 63.5 61 62.3
Migut.M01314 Erythranthe guttata HOM05D000355 ORTHO05D000227 1.2e-08 63.2 61 62.3
SGA_v2.0_scaffold4313G54467 Striga asiatica HOM05D000355 ORTHO05D000227 1.2e-08 63.2 45 68.9
TWI63G0815 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 1.5e-08 62.8 46 73.9
Actinidia05519 Actinidia chinensis HOM05D000355 ORTHO05D000227 2.0e-08 62.4 42 69.0
PGSC0003DMG400012665 Solanum tuberosum HOM05D000355 ORTHO05D000227 2.6e-08 62.0 56 57.1
Hma1.2p1_0091F.1_g046400 Hydrangea macrophylla HOM05D000355 ORTHO05D000227 3.4e-08 61.6 45 68.9
Lj1A1229T48 Lonicera japonica HOM05D000355 ORTHO05D000227 3.4e-08 61.6 52 59.6
Oeu037364.1 Olea europaea HOM05D000355 ORTHO05D000227 3.4e-08 61.6 51 58.8
PGR004G2354 Punica granatum HOM05D000355 ORTHO05D000227 3.4e-08 61.6 46 67.4
Sopen02g011090 Solanum pennellii HOM05D000355 ORTHO05D000227 3.4e-08 61.6 50 60.0
PGR042G0836 Punica granatum HOM05D000355 ORTHO05D000227 4.4e-08 61.2 52 55.8
VMungo0540G1899 Vigna mungo HOM05D000355 ORTHO05D000227 4.4e-08 61.2 51 62.7
Lalb_Chr18g0056341 Lupinus albus HOM05D000355 ORTHO05D000227 5.7e-08 60.8 46 69.6
MSTRG.14640 Avicennia marina HOM05D000355 ORTHO05D000227 7.5e-08 60.5 51 62.7
MSTRG.7216 Avicennia marina HOM05D000355 ORTHO05D000227 7.5e-08 60.5 56 64.3
Glyma.13G205000 Glycine max HOM05D000355 ORTHO05D000227 7.5e-08 60.5 59 59.3
Rhsim02G0107100 Rhododendron simsii HOM05D000355 ORTHO05D000227 7.5e-08 60.5 55 63.6
RcHm_v2.0_Chr5g0003211 Rosa chinensis HOM05D000355 ORTHO05D000227 7.5e-08 60.5 53 62.3
SalBow8G3224 Salvia bowleyana HOM05D000355 ORTHO05D000227 7.5e-08 60.5 86 47.7
TPR.G40850 Trifolium pratense HOM05D000355 ORTHO05D000227 7.5e-08 60.5 42 73.8
CAN.G569.11 Capsicum annuum HOM05D000355 ORTHO05D000227 1.7e-07 59.3 53 60.4
FvH4_3g02140 Fragaria vesca HOM05D000355 ORTHO05D000227 1.7e-07 59.3 53 60.4
FAN21G2006 Fragaria x ananassa HOM05D000355 ORTHO05D000227 1.7e-07 59.3 53 60.4
HanXRQChr16g0516141 Helianthus annuus HOM05D000355 ORTHO05D000227 1.7e-07 59.3 53 60.4
Lj1g0021211 Lotus japonicus HOM05D000355 ORTHO05D000227 1.7e-07 59.3 45 71.1
Lalb_Chr20g0118621 Lupinus albus HOM05D000355 ORTHO05D000227 1.7e-07 59.3 46 69.6
PSO541G1048 Papaver somniferum HOM05D000355 ORTHO05D000227 1.7e-07 59.3 55 60.0
Sopen02g025200 Solanum pennellii HOM05D000355 ORTHO05D000227 1.7e-07 59.3 53 64.2
PSO675G3322 Papaver somniferum HOM05D000355 ORTHO05D000227 2.2e-07 58.9 55 60.0
Prupe.4G021400 Prunus persica HOM05D000355 ORTHO05D000227 2.2e-07 58.9 52 63.5
Solyc02g032800.1 Solanum lycopersicum HOM05D000355 ORTHO05D000227 2.2e-07 58.9 57 54.4
TWI38G1026 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 2.2e-07 58.9 47 68.1
HanXRQChr05g0129441 Helianthus annuus HOM05D000355 ORTHO05D000227 2.8e-07 58.5 54 63.0
Medtr2g023070 Medicago truncatula HOM05D000355 ORTHO05D000227 2.8e-07 58.5 43 69.8
SalBow1G8099 Salvia bowleyana HOM05D000355 ORTHO05D000227 2.8e-07 58.5 57 57.9
PGSC0003DMG400016455 Solanum tuberosum HOM05D000355 ORTHO05D000227 2.8e-07 58.5 53 62.3
CsaV3_1G010800 Cucumis sativus L. HOM05D000355 ORTHO05D000227 3.7e-07 58.2 63 50.8
ECA236G4353 Erigeron canadensis HOM05D000355 ORTHO05D000227 3.7e-07 58.2 47 66.0
Lj6g0017882 Lotus japonicus HOM05D000355 ORTHO05D000227 3.7e-07 58.2 45 68.9
Nitab4.5_0000005g0470 Nicotiana tabacum HOM05D000355 ORTHO05D000227 3.7e-07 58.2 45 62.2
Phvul.006G150000 Phaseolus vulgaris HOM05D000355 ORTHO05D000227 3.7e-07 58.2 56 58.9
Solyc02g080510.1 Solanum lycopersicum HOM05D000355 ORTHO05D000227 3.7e-07 58.2 53 62.3
Aqoxy1G02165 Aquilegia oxysepala HOM05D000355 ORTHO05D000227 4.9e-07 57.8 53 58.5
ClCG03G004760 Citrullus lanatus HOM05D000355 ORTHO05D000227 4.9e-07 57.8 52 57.7
Glyma.15G107700 Glycine max HOM05D000355 ORTHO05D000227 4.9e-07 57.8 50 62.0
Oeu063915.2 Olea europaea HOM05D000355 ORTHO05D000227 6.3e-07 57.4 53 52.8
Lsat_1_v5_gn_7_15820 Lactuca sativa HOM05D000355 ORTHO05D000227 1.4e-06 56.2 56 55.4
Psat1g181120 Pisum sativum HOM05D000355 ORTHO05D000227 1.4e-06 56.2 42 66.7
FAN25G1866 Fragaria x ananassa HOM05D000355 ORTHO05D000227 1.8e-06 55.8 53 56.6
SGA_v2.0_scaffold89G27462 Striga asiatica HOM05D000355 ORTHO05D000227 2.4e-06 55.5 46 65.2
MELO3C002459.2 Cucumis melo HOM05D000355 ORTHO05D000227 3.1e-06 55.1 53 58.5
MBI18_g14478_MAGBIO Magnolia biondii HOM05D000355 ORTHO05D000227 3.1e-06 55.1 50 54.0
Ah.09g234950 Amaranthus hybridus HOM05D000355 ORTHO05D000227 4.1e-06 54.7 63 52.4
DCAR_008151 Daucus carota HOM05D000355 ORTHO05D000227 7.0e-06 53.9 51 56.9
arahy.Tifrunner.gnm1.ann1.8F6M4K Arachis hypogaea HOM05D000355 ORTHO05D000227 9.2e-06 53.5 45 62.2
Sed0005849 Sechium edule HOM05D000355 ORTHO05D000227 9.2e-06 53.5 45 60.0


User provided reference genes

Program Settings