Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01012649001 Vitis vinifera HOM05D006996 ORTHO05D008961 7.5e-48 193.4 87 100.0
Dinv39702 Davidia involucrata HOM05D006996 ORTHO05D008961 7.8e-45 183.3 87 93.1
Dinv05447 Davidia involucrata HOM05D006996 ORTHO05D008961 1.3e-44 182.6 87 93.1
Ciclev10017328m.g Citrus clementina HOM05D006996 ORTHO05D008961 8.6e-44 179.9 85 94.1
PGR042G2836 Punica granatum HOM05D006996 ORTHO05D008961 1.1e-43 179.5 85 92.9
Gohir.A02G139400 Gossypium hirsutum HOM05D006996 ORTHO05D008961 1.9e-43 178.7 85 92.9
Gohir.D03G050100 Gossypium hirsutum HOM05D006996 ORTHO05D008961 1.9e-43 178.7 85 92.9
Gorai.003G051600 Gossypium raimondii HOM05D006996 ORTHO05D008961 1.9e-43 178.7 85 92.9
CSS0007447 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 4.3e-43 177.6 86 89.5
CiPaw.03G161100 Carya illinoinensis HOM05D006996 ORTHO05D008961 5.6e-43 177.2 85 90.6
CANSAT64G1676 Cannabis sativa HOM05D006996 ORTHO05D008961 2.1e-42 175.3 85 89.4
Cc05_g04850 Coffea canephora HOM05D006996 ORTHO05D008961 2.1e-42 175.3 87 87.4
Eucgr.A01713 Eucalyptus grandis HOM05D006996 ORTHO05D008961 2.8e-42 174.9 85 89.4
MD09G1069700 Malus domestica HOM05D006996 ORTHO05D008961 2.8e-42 174.9 85 90.6
MD17G1095900 Malus domestica HOM05D006996 ORTHO05D008961 2.8e-42 174.9 85 90.6
RcHm_v2.0_Chr2g0159651 Rosa chinensis HOM05D006996 ORTHO05D008961 2.8e-42 174.9 85 91.8
CSS0016840 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 3.6e-42 174.5 85 88.2
Peaxi162Scf00007g00930 Petunia axillaris HOM05D006996 ORTHO05D008961 6.1e-42 173.7 87 87.4
Prupe.3G218000 Prunus persica HOM05D006996 ORTHO05D008961 6.1e-42 173.7 85 89.4
Hma1.2p1_0957F.1_g241430 Hydrangea macrophylla HOM05D006996 ORTHO05D008961 1.0e-41 172.9 87 88.5
FvH4_6g43320 Fragaria vesca HOM05D006996 ORTHO05D008961 1.4e-41 172.6 85 89.4
FAN14G3455 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.4e-41 172.6 85 89.4
Oeu027249.1 Olea europaea HOM05D006996 ORTHO05D008961 2.3e-41 171.8 87 87.4
Cfa014416 Carpinus fangiana HOM05D006996 ORTHO05D008961 3.1e-41 171.4 85 89.4
FAN05G4357 Fragaria x ananassa HOM05D006996 ORTHO05D008961 4.0e-41 171.0 85 88.2
TWI18G0629 Tripterygium wilfordii HOM05D006996 ORTHO05D008961 4.0e-41 171.0 85 88.2
QL08p033312 Quercus lobata HOM05D006996 ORTHO05D008961 5.2e-41 170.6 84 88.1
Solyc07g052420.3 Solanum lycopersicum HOM05D006996 ORTHO05D008961 5.2e-41 170.6 85 87.1
Nitab4.5_0002137g0190 Nicotiana tabacum HOM05D006996 ORTHO05D008961 6.8e-41 170.2 87 85.1
PGSC0003DMG400025488 Solanum tuberosum HOM05D006996 ORTHO05D008961 6.8e-41 170.2 85 85.9
Thecc.05G208500 Theobroma cacao HOM05D006996 ORTHO05D008961 6.8e-41 170.2 79 93.7
THA.LOC104800987 Tarenaya hassleriana HOM05D006996 ORTHO05D008961 8.9e-41 169.9 87 87.4
Duzib128G0982 Durio zibethinus HOM05D006996 ORTHO05D008961 1.2e-40 169.5 84 86.9
Ah.11g047700 Amaranthus hybridus HOM05D006996 ORTHO05D008961 1.5e-40 169.1 83 89.2
Manes.13G070800 Manihot esculenta HOM05D006996 ORTHO05D008961 1.5e-40 169.1 84 86.9
Sopen07g026050 Solanum pennellii HOM05D006996 ORTHO05D008961 1.5e-40 169.1 85 84.7
FAN02G2509 Fragaria x ananassa HOM05D006996 ORTHO05D008961 2.0e-40 168.7 85 88.2
Potri.018G093501 Populus trichocarpa HOM05D006996 ORTHO05D008961 2.0e-40 168.7 82 89.0
MSTRG.6557 Avicennia marina HOM05D006996 ORTHO05D008961 3.4e-40 167.9 87 86.2
Sed0014620 Sechium edule HOM05D006996 ORTHO05D008961 4.4e-40 167.5 85 87.1
Hund01114 Selenicereus undatus HOM05D006996 ORTHO05D008961 4.4e-40 167.5 87 86.2
CDE05G0144 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 5.8e-40 167.2 87 87.4
Sabra18G0080400 Salix brachista HOM05D006996 ORTHO05D008961 5.8e-40 167.2 82 87.8
CsaV3_7G003680 Cucumis sativus L. HOM05D006996 ORTHO05D008961 7.5e-40 166.8 84 88.1
Lj1A759T40 Lonicera japonica HOM05D006996 ORTHO05D008961 7.5e-40 166.8 84 88.1
Lj1A760T24 Lonicera japonica HOM05D006996 ORTHO05D008961 7.5e-40 166.8 84 88.1
ClCG02G001860 Citrullus lanatus HOM05D006996 ORTHO05D008961 9.8e-40 166.4 83 90.4
Zm00001eb100890 Zea mays HOM05D006996 ORTHO05D008961 1.3e-39 166.0 84 88.1
Zm00001eb209620 Zea mays HOM05D006996 ORTHO05D008961 1.3e-39 166.0 84 88.1
HanXRQChr11g0350381 Helianthus annuus HOM05D006996 ORTHO05D008961 1.7e-39 165.6 87 83.9
Nitab4.5_0007092g0010 Nicotiana tabacum HOM05D006996 ORTHO05D008961 1.7e-39 165.6 87 85.1
HPP92_011134 Vanilla planifolia HOM05D006996 ORTHO05D008961 1.7e-39 165.6 88 84.1
MELO3C018811.2 Cucumis melo HOM05D006996 ORTHO05D008961 2.9e-39 164.9 81 90.1
Actinidia30517 Actinidia chinensis HOM05D006996 ORTHO05D008961 3.7e-39 164.5 85 87.1
EL10Ac5g11141 Beta vulgaris HOM05D006996 ORTHO05D008961 3.7e-39 164.5 83 85.5
CDE11G0800 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 4.9e-39 164.1 87 86.2
Lsat_1_v5_gn_5_163860 Lactuca sativa HOM05D006996 ORTHO05D008961 4.9e-39 164.1 87 82.8
vmacro09127 Vaccinium macrocarpon HOM05D006996 ORTHO05D008961 1.4e-38 162.5 86 82.6
ECA248G0348 Erigeron canadensis HOM05D006996 ORTHO05D008961 2.4e-38 161.8 84 83.3
CAN.G846.6 Capsicum annuum HOM05D006996 ORTHO05D008961 3.2e-38 161.4 85 81.2
Nn2g12174 Nelumbo nucifera HOM05D006996 ORTHO05D008961 3.2e-38 161.4 105 72.4
Aa31LG1G19540 Aethionema arabicum HOM05D006996 ORTHO05D008961 1.2e-37 159.5 85 83.5
PSO541G2316 Papaver somniferum HOM05D006996 ORTHO05D008961 2.7e-37 158.3 84 83.3
PSO675G8615 Papaver somniferum HOM05D006996 ORTHO05D008961 2.7e-37 158.3 84 83.3
AT1G05205 Arabidopsis thaliana HOM05D006996 ORTHO05D008961 3.5e-37 157.9 84 84.5
Carub.0001s0448 Capsella rubella HOM05D006996 ORTHO05D008961 4.6e-37 157.5 85 83.5
AL1G14970 Arabidopsis lyrata HOM05D006996 ORTHO05D008961 6.0e-37 157.1 84 83.3
Thhalv10009219m.g Eutrema salsugineum HOM05D006996 ORTHO05D008961 6.0e-37 157.1 85 83.5
Glyma.12G194300 Glycine max HOM05D006996 ORTHO05D008961 6.0e-37 157.1 83 83.1
Sp1g04060 Schrenkiella parvula HOM05D006996 ORTHO05D008961 6.0e-37 157.1 85 83.5
SpUn0024_0080 Schrenkiella parvula HOM05D006996 ORTHO05D008961 6.0e-37 157.1 85 83.5
BcaC07g42146 Brassica carinata HOM05D006996 ORTHO05D008961 7.8e-37 156.8 84 83.3
Medtr2g088460 Medicago truncatula HOM05D006996 ORTHO05D008961 1.0e-36 156.4 82 84.1
A10p03740 Brassica napus HOM05D006996 ORTHO05D008961 1.7e-36 155.6 85 82.4
C05p03440 Brassica napus HOM05D006996 ORTHO05D008961 1.7e-36 155.6 85 82.4
C08p51920 Brassica napus HOM05D006996 ORTHO05D008961 1.7e-36 155.6 84 82.1
BolC5t29123H Brassica oleracea HOM05D006996 ORTHO05D008961 1.7e-36 155.6 85 82.4
BolC8t52723H Brassica oleracea HOM05D006996 ORTHO05D008961 1.7e-36 155.6 84 82.1
BraA09t42088Z Brassica rapa HOM05D006996 ORTHO05D008961 1.7e-36 155.6 84 82.1
BraA10t42647Z Brassica rapa HOM05D006996 ORTHO05D008961 1.7e-36 155.6 85 82.4
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 2.3e-36 155.2 85 81.2
TPR.G4182 Trifolium pratense HOM05D006996 ORTHO05D008961 5.0e-36 154.1 87 81.6
arahy.Tifrunner.gnm1.ann1.7T5QAW Arachis hypogaea HOM05D006996 ORTHO05D008961 8.6e-36 153.3 79 83.5
arahy.Tifrunner.gnm1.ann1.BHY6M8 Arachis hypogaea HOM05D006996 ORTHO05D008961 8.6e-36 153.3 79 83.5
arahy.Tifrunner.gnm1.ann1.MSE8LU Arachis hypogaea HOM05D006996 ORTHO05D008961 8.6e-36 153.3 79 83.5
arahy.Tifrunner.gnm1.ann1.QWF8TS Arachis hypogaea HOM05D006996 ORTHO05D008961 8.6e-36 153.3 79 83.5
AUR62000730 Chenopodium quinoa HOM05D006996 ORTHO05D008961 8.6e-36 153.3 86 81.4
CARHR004680 Cardamine hirsuta HOM05D006996 ORTHO05D008961 1.5e-35 152.5 84 82.1
Migut.M00413 Erythranthe guttata HOM05D006996 ORTHO05D008961 1.5e-35 152.5 86 77.9
Glyma.13G308300 Glycine max HOM05D006996 ORTHO05D008961 1.9e-35 152.1 83 81.9
unitig_21.g20728 Utricularia gibba HOM05D006996 ORTHO05D008961 1.9e-35 152.1 80 81.2
AUR62021549 Chenopodium quinoa HOM05D006996 ORTHO05D008961 2.5e-35 151.8 86 80.2
Phvul.005G114700 Phaseolus vulgaris HOM05D006996 ORTHO05D008961 3.6e-34 147.9 80 80.0
AUR62008544 Chenopodium quinoa HOM05D006996 ORTHO05D008961 4.0e-33 144.4 86 77.9
Lj3g0015321 Lotus japonicus HOM05D006996 ORTHO05D008961 4.0e-33 144.4 78 80.8
CSS0029979 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 4.4e-32 141.0 67 89.6
SalBow7G3715 Salvia bowleyana HOM05D006996 ORTHO05D008961 4.4e-32 141.0 87 75.9
DCAR_014473 Daucus carota HOM05D006996 ORTHO05D008961 9.8e-32 139.8 64 95.3
Lalb_Chr14g0375741 Lupinus albus HOM05D006996 ORTHO05D008961 3.7e-31 137.9 75 78.7
TAR627G0363 Trochodendron aralioides HOM05D006996 ORTHO05D008961 7.0e-30 133.7 64 90.6
Sc12g0002320 Simmondsia chinensis HOM05D006996 ORTHO05D008961 6.0e-29 130.6 63 88.9
Lsat_1_v5_gn_4_184120 Lactuca sativa HOM05D006996 ORTHO05D008961 4.3e-27 124.4 64 79.7
Psat5g264240 Pisum sativum HOM05D006996 ORTHO05D008961 8.1e-26 120.2 61 85.2
TAR676G0001 Trochodendron aralioides HOM05D006996 ORTHO05D008961 4.1e-22 107.8 52 86.5
COL.COLO4_06384 Corchorus olitorius HOM05D006996 ORTHO05D008961 2.1e-21 105.5 50 90.0
Mapoly0024s0016 Marchantia polymorpha HOM05D006996 ORTHO05D008961 5.6e-19 97.4 64 64.1
SEGI_13346 Sequoiadendron giganteum HOM05D006996 ORTHO05D008961 4.2e-14 81.3 56 58.9
CSS0002917 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 7.1e-14 80.5 39 89.7
FAN09G4817 Fragaria x ananassa HOM05D006996 ORTHO05D008961 7.8e-13 77.0 35 94.3
MCO13G082 Micromonas commoda HOM05D006996 ORTHO05D008961 7.8e-13 77.0 58 58.6
CSS0018135 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.7e-12 75.9 39 82.1
BcaB01g06120 Brassica carinata HOM05D006996 ORTHO05D008961 1.4e-09 66.2 39 76.9
TPR.G35081 Trifolium pratense HOM05D006996 ORTHO05D048925 5.8e-08 60.8 38 71.1


User provided reference genes

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