Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01012248001 Vitis vinifera HOM05D004533 ORTHO05D005347 3.7e-135 485.0 258 100.0
Cfa008857 Carpinus fangiana HOM05D004533 ORTHO05D005347 8.8e-12 75.1 43 81.4
TAR371G0131 Trochodendron aralioides HOM05D004533 ORTHO05D005347 2.0e-11 73.9 64 57.8
Haze_11876 Corylus avellana HOM05D004533 ORTHO05D005347 3.4e-11 73.2 64 62.5
Dinv34043 Davidia involucrata HOM05D004533 ORTHO05D005347 9.8e-11 71.6 46 71.7
QL03p073504 Quercus lobata HOM05D004533 ORTHO05D005347 9.8e-11 71.6 68 57.4
Manes.01G025900 Manihot esculenta HOM05D004533 ORTHO05D005347 2.2e-10 70.5 43 74.4
CSS0048067 Camellia sinensis var. sinensis HOM05D004533 ORTHO05D005347 2.8e-10 70.1 74 51.4
TAR629G1049 Trochodendron aralioides HOM05D004533 ORTHO05D005347 1.1e-09 68.2 40 75.0
CiPaw.05G123000 Carya illinoinensis HOM05D004533 ORTHO05D005347 3.1e-09 66.6 64 59.4
CiPaw.06G093700 Carya illinoinensis HOM05D004533 ORTHO05D005347 3.1e-09 66.6 43 74.4
Duzib248G0866 Durio zibethinus HOM05D004533 ORTHO05D005347 3.1e-09 66.6 40 75.0
Gohir.D02G131100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 3.1e-09 66.6 40 77.5
Dinv20147 Davidia involucrata HOM05D004533 ORTHO05D005347 4.1e-09 66.2 41 80.5
Gohir.A03G105900 Gossypium hirsutum HOM05D004533 ORTHO05D005347 4.1e-09 66.2 40 77.5
Thecc.02G326400 Theobroma cacao HOM05D004533 ORTHO05D005347 4.1e-09 66.2 40 77.5
Ciclev10032087m.g Citrus clementina HOM05D004533 ORTHO05D005347 5.4e-09 65.9 35 88.6
Duzib268G0904 Durio zibethinus HOM05D004533 ORTHO05D005347 5.4e-09 65.9 40 75.0
Duzib251G0596 Durio zibethinus HOM05D004533 ORTHO05D005347 7.0e-09 65.5 40 75.0
Cpa.g.sc1.160 Carica papaya HOM05D004533 ORTHO05D005347 9.1e-09 65.1 69 52.2
Glyma.01G063800 Glycine max HOM05D004533 ORTHO05D005347 1.6e-08 64.3 89 42.7
Gohir.A13G084500 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.6e-08 64.3 66 51.5
Gohir.D13G084000 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.6e-08 64.3 66 51.5
Gorai.013G095800 Gossypium raimondii HOM05D004533 ORTHO05D005347 1.6e-08 64.3 66 51.5
Gorai.005G147000 Gossypium raimondii HOM05D004533 ORTHO05D005347 2.0e-08 63.9 40 75.0
Nn4g23503 Nelumbo nucifera HOM05D004533 ORTHO05D005347 2.0e-08 63.9 64 54.7
Prupe.1G290400 Prunus persica HOM05D004533 ORTHO05D005347 2.0e-08 63.9 60 58.3
VMungo1215G1442 Vigna mungo HOM05D004533 ORTHO05D005347 2.0e-08 63.9 43 67.4
vmacro01308 Vaccinium macrocarpon HOM05D004533 ORTHO05D005347 2.7e-08 63.5 46 65.2
Manes.05G112100 Manihot esculenta HOM05D004533 ORTHO05D005347 3.5e-08 63.2 66 51.5
COL.COLO4_27845 Corchorus olitorius HOM05D004533 ORTHO05D005347 4.5e-08 62.8 40 77.5
Psat2g098360 Pisum sativum HOM05D004533 ORTHO05D005347 4.5e-08 62.8 51 66.7
Lj2g0015000 Lotus japonicus HOM05D004533 ORTHO05D005347 5.9e-08 62.4 65 52.3
Ca_05043_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 1.0e-07 61.6 35 80.0
Ca_19594_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 1.0e-07 61.6 35 80.0
FvH4_4g29630 Fragaria vesca HOM05D004533 ORTHO05D005347 1.0e-07 61.6 40 75.0
FAN07G1881 Fragaria x ananassa HOM05D004533 ORTHO05D005347 1.0e-07 61.6 40 75.0
FAN12G3098 Fragaria x ananassa HOM05D004533 ORTHO05D005347 1.0e-07 61.6 40 75.0
FAN17G0049 Fragaria x ananassa HOM05D004533 ORTHO05D005347 1.0e-07 61.6 40 75.0
FAN22G0793 Fragaria x ananassa HOM05D004533 ORTHO05D005347 1.0e-07 61.6 40 75.0
Phvul.003G039500 Phaseolus vulgaris HOM05D004533 ORTHO05D005347 1.0e-07 61.6 44 68.2
CANSAT64G2295 Cannabis sativa HOM05D004533 ORTHO05D005347 1.3e-07 61.2 37 73.0
Lalb_Chr10g0099071 Lupinus albus HOM05D004533 ORTHO05D005347 2.2e-07 60.5 60 53.3
Lalb_Chr17g0341371 Lupinus albus HOM05D004533 ORTHO05D005347 2.2e-07 60.5 61 55.7
MD16G1058700 Malus domestica HOM05D004533 ORTHO05D005347 2.2e-07 60.5 51 60.8
RcHm_v2.0_Chr4g0437861 Rosa chinensis HOM05D004533 ORTHO05D005347 2.9e-07 60.1 31 87.1
TPR.G38582 Trifolium pratense HOM05D004533 ORTHO05D005347 3.8e-07 59.7 90 46.7
THA.LOC104798855 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 5.0e-07 59.3 42 71.4
THA.LOC104803161 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 5.0e-07 59.3 42 71.4
THA.LOC104822894 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 5.0e-07 59.3 42 71.4
MD13G1059400 Malus domestica HOM05D004533 ORTHO05D005347 6.5e-07 58.9 61 57.4
Rhsim12G0073600 Rhododendron simsii HOM05D004533 ORTHO05D005347 6.5e-07 58.9 45 62.2
Eucgr.B03139 Eucalyptus grandis HOM05D004533 ORTHO05D005347 8.5e-07 58.5 69 46.4
Hma1.2p1_3075F.1_g332390 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 8.5e-07 58.5 45 60.0
Medtr5g046750 Medicago truncatula HOM05D004533 ORTHO05D005347 8.5e-07 58.5 76 50.0
arahy.Tifrunner.gnm1.ann1.PV72KB Arachis hypogaea HOM05D004533 ORTHO05D005347 1.1e-06 58.2 72 48.6
Glyma.02G121400 Glycine max HOM05D004533 ORTHO05D005347 1.5e-06 57.8 89 41.6
Potri.008G098200 Populus trichocarpa HOM05D004533 ORTHO05D005347 1.5e-06 57.8 41 73.2
Actinidia26533 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.9e-06 57.4 34 73.5
Oeu028724.1 Olea europaea HOM05D004533 ORTHO05D005347 1.9e-06 57.4 39 71.8
arahy.Tifrunner.gnm1.ann1.NK9Z7F Arachis hypogaea HOM05D004533 ORTHO05D005347 2.5e-06 57.0 56 55.4
Rhsim09G0125000 Rhododendron simsii HOM05D004533 ORTHO05D005347 2.5e-06 57.0 83 43.4
Cc11_g11730 Coffea canephora HOM05D004533 ORTHO05D005347 4.2e-06 56.2 46 58.7
Oeu048133.1 Olea europaea HOM05D004533 ORTHO05D005347 5.5e-06 55.8 55 56.4
Oeu048134.1 Olea europaea HOM05D004533 ORTHO05D005347 5.5e-06 55.8 55 56.4
Potri.010G154200 Populus trichocarpa HOM05D004533 ORTHO05D005347 5.5e-06 55.8 41 70.7
Sabra10G0118800 Salix brachista HOM05D004533 ORTHO05D005347 5.5e-06 55.8 41 70.7
ClCG05G023610 Citrullus lanatus HOM05D004533 ORTHO05D005347 7.2e-06 55.5 32 75.0
CsaV3_5G033410 Cucumis sativus L. HOM05D004533 ORTHO05D005347 9.4e-06 55.1 64 45.3


User provided reference genes

Program Settings