Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01012214001 Vitis vinifera HOM05D001391 ORTHO05D005432 2.7e-203 711.8 380 100.0
CiPaw.06G092300 Carya illinoinensis HOM05D001391 ORTHO05D005432 1.1e-159 567.0 366 80.6
Lj3C1030G23 Lonicera japonica HOM05D001391 ORTHO05D005432 3.9e-157 558.5 337 84.0
TAR629G1471 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.1e-156 557.0 377 75.6
TAR629G2660 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.1e-156 557.0 377 75.6
Sopen05g007170 Solanum pennellii HOM05D001391 ORTHO05D005432 2.5e-156 555.8 358 78.8
Manes.01G028100 Manihot esculenta HOM05D001391 ORTHO05D005432 3.3e-156 555.4 341 81.5
Sabra10G0120500 Salix brachista HOM05D001391 ORTHO05D005432 1.8e-154 549.7 372 76.6
QL03p071791 Quercus lobata HOM05D001391 ORTHO05D005432 5.2e-154 548.1 335 81.5
QL03p072323 Quercus lobata HOM05D001391 ORTHO05D005432 6.8e-154 547.7 335 80.9
QL03p071836 Quercus lobata HOM05D001391 ORTHO05D005432 1.2e-153 547.0 335 80.9
Potri.010G158700 Populus trichocarpa HOM05D001391 ORTHO05D005432 2.6e-153 545.8 370 75.4
TWI31G1273 Tripterygium wilfordii HOM05D001391 ORTHO05D005432 3.4e-153 545.4 363 75.5
QL06p022506 Quercus lobata HOM05D001391 ORTHO05D005432 1.9e-151 539.7 325 81.8
QL03p072348 Quercus lobata HOM05D001391 ORTHO05D005432 3.2e-151 538.9 329 81.2
Cc11_g12040 Coffea canephora HOM05D001391 ORTHO05D005432 7.1e-151 537.7 359 77.7
SGA_v2.0_scaffold16G07780 Striga asiatica HOM05D001391 ORTHO05D005432 7.1e-151 537.7 338 79.9
QL03p071994 Quercus lobata HOM05D001391 ORTHO05D005432 9.2e-151 537.3 329 80.9
CSS0007431 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.2e-150 537.0 336 80.1
CSS0028231 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.2e-150 537.0 336 80.1
MELO3C011425.2 Cucumis melo HOM05D001391 ORTHO05D005432 2.1e-150 536.2 339 77.9
Duzib248G0196 Durio zibethinus HOM05D001391 ORTHO05D005432 2.7e-150 535.8 374 76.7
Prupe.1G286500 Prunus persica HOM05D001391 ORTHO05D005432 1.3e-149 533.5 380 75.0
CDE05G0079 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 1.7e-149 533.1 364 75.0
Actinidia16169 Actinidia chinensis HOM05D001391 ORTHO05D005432 2.3e-149 532.7 315 82.9
CAN.G616.39 Capsicum annuum HOM05D001391 ORTHO05D005432 2.3e-149 532.7 336 80.4
MD16G1061600 Malus domestica HOM05D001391 ORTHO05D005432 2.3e-149 532.7 367 74.9
QL03p072246 Quercus lobata HOM05D001391 ORTHO05D005432 2.3e-149 532.7 364 74.5
Dinv34072 Davidia involucrata HOM05D001391 ORTHO05D005432 3.9e-149 531.9 331 81.0
Oeu048144.1 Olea europaea HOM05D001391 ORTHO05D005432 3.9e-149 531.9 316 84.2
DCAR_007192 Daucus carota HOM05D001391 ORTHO05D005432 5.1e-149 531.6 377 73.7
PGR102G1705 Punica granatum HOM05D001391 ORTHO05D005432 6.6e-149 531.2 321 81.6
THA.LOC104824058 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 8.7e-149 530.8 364 75.0
HanXRQChr15g0477081 Helianthus annuus HOM05D001391 ORTHO05D005432 1.9e-148 529.6 339 78.5
Ciclev10031905m.g Citrus clementina HOM05D001391 ORTHO05D005432 3.3e-148 528.9 332 78.9
FvH4_4g30104 Fragaria vesca HOM05D001391 ORTHO05D005432 4.3e-148 528.5 323 81.1
FAN07G1596 Fragaria x ananassa HOM05D001391 ORTHO05D005432 4.3e-148 528.5 324 80.6
QL03p071709 Quercus lobata HOM05D001391 ORTHO05D005432 4.3e-148 528.5 325 79.7
Eucgr.B03154 Eucalyptus grandis HOM05D001391 ORTHO05D005432 7.3e-148 527.7 326 79.4
Thecc.02G331500 Theobroma cacao HOM05D001391 ORTHO05D005432 9.6e-148 527.3 309 83.5
FAN17G2247 Fragaria x ananassa HOM05D001391 ORTHO05D002605 1.6e-147 526.6 325 80.6
RcHm_v2.0_Chr4g0438441 Rosa chinensis HOM05D001391 ORTHO05D005432 2.1e-147 526.2 352 78.1
Atru.chr11.1633 Acer truncatum HOM05D001391 ORTHO05D005432 3.6e-147 525.4 332 78.3
Sed0003297 Sechium edule HOM05D001391 ORTHO05D005432 3.6e-147 525.4 332 78.0
Sed0027135 Sechium edule HOM05D001391 ORTHO05D005432 3.6e-147 525.4 356 73.6
ECA246G4329 Erigeron canadensis HOM05D001391 ORTHO05D005432 4.7e-147 525.0 376 73.1
HanXRQChr12g0375271 Helianthus annuus HOM05D001391 ORTHO05D005432 8.1e-147 524.2 338 77.8
MD13G1063100 Malus domestica HOM05D001391 ORTHO05D005432 1.4e-146 523.5 380 73.4
Lj4g0006249 Lotus japonicus HOM05D001391 ORTHO05D005432 6.9e-146 521.2 339 76.7
CANSAT64G0915 Cannabis sativa HOM05D001391 ORTHO05D005432 1.5e-145 520.0 326 77.9
PGSC0003DMG400028375 Solanum tuberosum HOM05D001391 ORTHO05D005432 2.6e-145 519.2 313 82.7
Glyma.20G025600 Glycine max HOM05D001391 ORTHO05D005432 1.3e-144 516.9 356 74.7
Ah.02g126880 Amaranthus hybridus HOM05D001391 ORTHO05D005432 1.7e-144 516.5 360 71.7
Medtr4g083100 Medicago truncatula HOM05D001391 ORTHO05D005432 4.9e-144 515.0 332 78.6
THA.LOC104805193 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 4.9e-144 515.0 319 79.9
Psat7g134560 Pisum sativum HOM05D001391 ORTHO05D005432 6.4e-144 514.6 331 78.2
AUR62003104 Chenopodium quinoa HOM05D001391 ORTHO05D005432 1.4e-143 513.5 322 78.0
PSO017G5650 Papaver somniferum HOM05D001391 ORTHO05D005432 1.4e-143 513.5 334 76.6
Ca_18800_v3 Cicer arietinum L. HOM05D001391 ORTHO05D005432 2.4e-143 512.7 323 79.6
PSO478G1327 Papaver somniferum HOM05D001391 ORTHO05D005432 2.4e-143 512.7 334 76.9
arahy.Tifrunner.gnm1.ann1.52K398 Arachis hypogaea HOM05D001391 ORTHO05D005432 3.2e-143 512.3 369 70.7
arahy.Tifrunner.gnm1.ann1.G55KBL Arachis hypogaea HOM05D001391 ORTHO05D005432 3.2e-143 512.3 327 77.4
Sp2g14420 Schrenkiella parvula HOM05D001391 ORTHO05D005432 5.4e-143 511.5 364 72.8
AT2G03510 Arabidopsis thaliana HOM05D001391 ORTHO05D005432 7.1e-143 511.1 363 72.5
BcaB07g30667 Brassica carinata HOM05D001391 ORTHO05D005432 9.3e-143 510.8 356 73.9
TPR.G34031 Trifolium pratense HOM05D001391 ORTHO05D005432 9.3e-143 510.8 335 76.4
VMungo0251G0716 Vigna mungo HOM05D001391 ORTHO05D005432 9.3e-143 510.8 382 70.9
Carub.0005s0265 Capsella rubella HOM05D001391 ORTHO05D005432 1.6e-142 510.0 363 72.5
RcHm_v2.0_Chr4g0438461 Rosa chinensis HOM05D001391 ORTHO05D005432 1.6e-142 510.0 329 76.3
ATR0064G010 Amborella trichopoda HOM05D001391 ORTHO05D005432 2.1e-142 509.6 302 81.5
AL5G13280 Arabidopsis lyrata HOM05D001391 ORTHO05D005432 2.1e-142 509.6 378 71.2
Thhalv10004477m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 2.1e-142 509.6 359 73.8
Lalb_Chr05g0219941 Lupinus albus HOM05D001391 ORTHO05D005432 2.1e-142 509.6 320 79.7
Aa31LG2G7090 Aethionema arabicum HOM05D001391 ORTHO05D005432 2.7e-142 509.2 365 72.3
Aqoxy3G03632 Aquilegia oxysepala HOM05D001391 ORTHO05D005432 1.0e-141 507.3 333 76.9
CARHR145860 Cardamine hirsuta HOM05D001391 ORTHO05D005432 1.3e-141 506.9 356 73.0
BcaC03g17224 Brassica carinata HOM05D001391 ORTHO05D005432 2.3e-141 506.1 359 73.0
C02p51560 Brassica napus HOM05D001391 ORTHO05D005432 2.3e-141 506.1 359 73.0
BolC2t11243H Brassica oleracea HOM05D001391 ORTHO05D005432 2.3e-141 506.1 359 73.0
BcaC04g21485 Brassica carinata HOM05D001391 ORTHO05D005432 3.9e-141 505.4 356 73.0
A09p24460 Brassica napus HOM05D001391 ORTHO05D005432 3.9e-141 505.4 354 73.4
C09p31260 Brassica napus HOM05D001391 ORTHO05D005432 3.9e-141 505.4 356 73.0
BolC9t55982H Brassica oleracea HOM05D001391 ORTHO05D005432 3.9e-141 505.4 356 73.0
BraA09t38039Z Brassica rapa HOM05D001391 ORTHO05D005432 5.1e-141 505.0 354 73.4
EL10Ac6g14993 Beta vulgaris HOM05D001391 ORTHO05D005432 6.6e-141 504.6 316 77.2
COL.COLO4_27891 Corchorus olitorius HOM05D001391 ORTHO05D005432 6.6e-141 504.6 378 68.8
Zm00001eb393170 Zea mays HOM05D001391 ORTHO05D005432 8.7e-141 504.2 337 75.1
FAN22G1389 Fragaria x ananassa HOM05D001391 ORTHO05D005432 1.9e-140 503.1 354 75.1
Lsat_1_v5_gn_3_53800 Lactuca sativa HOM05D001391 ORTHO05D005432 9.6e-140 500.7 339 74.9
Haze_11913 Corylus avellana HOM05D001391 ORTHO05D005432 2.1e-139 499.6 290 84.5
Nitab4.5_0001487g0070 Nicotiana tabacum HOM05D001391 ORTHO05D005432 8.1e-139 497.7 334 78.7
unitig_22.g6493 Utricularia gibba HOM05D001391 ORTHO05D005432 9.9e-137 490.7 341 73.3
Gorai.013G093700 Gossypium raimondii HOM05D001391 ORTHO05D005432 1.3e-136 490.3 336 74.4
TAR622G0883 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.7e-136 490.0 388 68.0
Nitab4.5_0000231g0390 Nicotiana tabacum HOM05D001391 ORTHO05D005432 2.2e-136 489.6 331 78.2
HPP92_020445 Vanilla planifolia HOM05D001391 ORTHO05D005432 3.8e-136 488.8 309 78.6
DCAR_030039 Daucus carota HOM05D001391 ORTHO05D005432 4.9e-136 488.4 341 73.3
Gohir.D13G081800 Gossypium hirsutum HOM05D001391 ORTHO05D005432 1.0e-133 480.7 336 73.2
QL03p071737 Quercus lobata HOM05D001391 ORTHO05D005432 5.1e-133 478.4 337 74.5
QL03p071961 Quercus lobata HOM05D001391 ORTHO05D005432 2.5e-132 476.1 318 75.2
Hund05837 Selenicereus undatus HOM05D001391 ORTHO05D005432 3.3e-132 475.7 319 74.0
Zm00001eb020150 Zea mays HOM05D001391 ORTHO05D005432 5.6e-132 474.9 326 73.9
Migut.L01194 Erythranthe guttata HOM05D001391 ORTHO05D005432 1.6e-131 473.4 319 75.2
CsaV3_6G032550 Cucumis sativus L. HOM05D001391 ORTHO05D005432 8.1e-131 471.1 327 73.1
SMO364G0146 Selaginella moellendorffii HOM05D001391 ORTHO05D005432 1.4e-130 470.3 300 76.0
Sabra08G0071900 Salix brachista HOM05D001391 ORTHO05D005432 3.4e-129 465.7 383 67.1
vmacro01316 Vaccinium macrocarpon HOM05D001391 ORTHO05D005432 3.4e-129 465.7 337 73.0
PSO478G2440 Papaver somniferum HOM05D001391 ORTHO05D005432 3.2e-127 459.1 314 74.5
Dinv16729 Davidia involucrata HOM05D001391 ORTHO05D005432 7.1e-127 458.0 300 78.3
Pp3c1_8060 Physcomitrium patens HOM05D001391 ORTHO05D005432 3.5e-126 455.7 296 74.0
Pp3c2_37740 Physcomitrium patens HOM05D001391 ORTHO05D005432 6.0e-126 454.9 299 74.2
Lj6C779T14 Lonicera japonica HOM05D001391 ORTHO05D005432 5.1e-125 451.8 383 63.4
Mapoly0041s0056 Marchantia polymorpha HOM05D001391 ORTHO05D005432 1.9e-124 449.9 321 69.8
AagrBONN_evm.TU.Sc2ySwM_228.3454 Anthoceros agrestis HOM05D001391 ORTHO05D005432 1.1e-122 444.1 316 68.4
Glyma.07G225600 Glycine max HOM05D001391 ORTHO05D005432 1.1e-122 444.1 275 80.4
Phvul.002G102100 Phaseolus vulgaris HOM05D001391 ORTHO05D005432 1.0e-120 437.6 305 75.1
Cpa.g.sc1.121 Carica papaya HOM05D001391 ORTHO05D005432 9.3e-119 431.0 376 64.9
CsaV3_6G033630 Cucumis sativus L. HOM05D001391 ORTHO05D005432 6.0e-118 428.3 333 67.6
ClCG08G010360 Citrullus lanatus HOM05D001391 ORTHO05D005432 1.0e-117 427.6 298 73.2
CBR_g22084 Chara braunii HOM05D001391 ORTHO05D005432 2.3e-117 426.4 294 70.7
Nn4g23419 Nelumbo nucifera HOM05D001391 ORTHO05D005432 9.0e-114 414.5 335 66.3
Solyc05g012340.4 Solanum lycopersicum HOM05D001391 ORTHO05D005432 1.9e-111 406.8 242 85.5
Thhalv10022792m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 5.5e-111 405.2 359 60.4
Thhalv10022979m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 5.5e-111 405.2 359 60.4
AUR62007921 Chenopodium quinoa HOM05D001391 ORTHO05D005432 7.2e-111 404.8 319 65.2
MBI16_g24179_MAGBIO Magnolia biondii HOM05D001391 ORTHO05D005432 4.6e-110 402.1 334 64.7
Rhsim12G0074900 Rhododendron simsii HOM05D001391 ORTHO05D005432 6.1e-110 401.7 306 69.0
Peaxi162Scf00175g00121 Petunia axillaris HOM05D001391 ORTHO05D005432 5.1e-109 398.7 245 80.0
Sc11g0002420 Simmondsia chinensis HOM05D001391 ORTHO05D005432 1.5e-105 387.1 297 68.0
Eucgr.B03155 Eucalyptus grandis HOM05D001391 ORTHO05D005432 3.8e-104 382.5 242 76.9
Thecc.02G331800 Theobroma cacao HOM05D001391 ORTHO05D005432 1.4e-93 347.4 227 76.7
CSS0036366 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 2.6e-92 343.2 239 74.9
Nn3g17437 Nelumbo nucifera HOM05D001391 ORTHO05D005432 2.2e-91 340.1 338 56.5
CDE02G0606 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 3.5e-89 332.8 207 77.8
Gohir.A13G082200 Gossypium hirsutum HOM05D001391 ORTHO05D005432 1.7e-88 330.5 209 77.5
Eucgr.B03159 Eucalyptus grandis HOM05D001391 ORTHO05D005432 1.0e-77 294.7 197 77.2
Gohir.D12G164650 Gossypium hirsutum HOM05D001391 ORTHO05D005432 1.1e-71 274.6 262 59.9
HanXRQChr08g0223901 Helianthus annuus HOM05D001391 ORTHO05D005432 1.5e-68 264.2 182 75.3
Hund25181 Selenicereus undatus HOM05D001391 ORTHO05D005432 8.0e-62 241.9 147 76.9
Gorai.008G177300 Gossypium raimondii HOM05D001391 ORTHO05D005432 1.4e-58 231.1 167 73.7
SEGI_41081 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 4.7e-46 189.5 131 74.0
SEGI_06703 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 5.2e-45 186.0 131 71.8
SEGI_37700 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.7e-41 173.7 122 71.3
CSS0025210 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 4.3e-39 166.4 138 63.8
Hma1.2p1_1826F.1_g304410 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 1.2e-36 158.3 130 66.9
QL03p071882 Quercus lobata HOM05D001391 ORTHO05D005432 2.7e-33 147.1 117 71.8
Hund25180 Selenicereus undatus HOM05D001391 ORTHO05D005432 6.0e-33 146.0 98 73.5
Gorai.008G177400 Gossypium raimondii HOM05D001391 ORTHO05D005432 1.0e-32 145.2 79 82.3
Hma1.2p1_3404F.1_g335810 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 1.1e-31 141.7 124 66.9
QL01p050908 Quercus lobata HOM05D001391 ORTHO05D005432 4.4e-28 129.8 119 55.5
Mapoly0004s0019 Marchantia polymorpha HOM05D001391 ORTHO05D005432 2.9e-27 127.1 271 32.1
Gohir.A13G082366 Gossypium hirsutum HOM05D001391 ORTHO05D005432 3.3e-23 113.6 88 69.3
SEGI_28419 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 3.3e-23 113.6 86 64.0
BcaB07g30295 Brassica carinata HOM05D001391 ORTHO05D005432 1.7e-19 101.3 79 73.4
Os03g0421400 Oryza sativa ssp. japonica HOM05D001391 ORTHO05D005432 1.9e-18 97.8 76 60.5
SEGI_38290 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.7e-17 94.0 56 71.4
SEGI_10839 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 3.0e-16 90.5 76 52.6
QL01p050911 Quercus lobata HOM05D001391 ORTHO05D005432 9.6e-15 85.5 72 68.1
MD16G1164500 Malus domestica HOM05D001391 ORTHO05D005432 4.8e-14 83.2 43 83.7


User provided reference genes

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