Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01012208001 Vitis vinifera HOM05D006060 ORTHO05D007268 9.1e-57 223.4 117 100.0
TAR622G0987 Trochodendron aralioides HOM05D006060 ORTHO05D007268 8.8e-44 180.3 117 77.8
FvH4_4g30180 Fragaria vesca HOM05D006060 ORTHO05D007268 7.5e-43 177.2 115 78.3
RcHm_v2.0_Chr4g0438511 Rosa chinensis HOM05D006060 ORTHO05D007268 9.8e-43 176.8 117 78.6
Atru.chr11.1651 Acer truncatum HOM05D006060 ORTHO05D007268 1.7e-42 176.0 115 79.1
Ciclev10033030m.g Citrus clementina HOM05D006060 ORTHO05D007268 8.3e-42 173.7 117 76.1
MELO3C012147.2 Cucumis melo HOM05D006060 ORTHO05D007268 8.3e-42 173.7 117 74.4
CiPaw.06G092000 Carya illinoinensis HOM05D006060 ORTHO05D007268 1.4e-41 172.9 117 76.1
Manes.01G028500 Manihot esculenta HOM05D006060 ORTHO05D007268 2.4e-41 172.2 115 77.4
CsaV3_5G033260 Cucumis sativus L. HOM05D006060 ORTHO05D007268 3.1e-41 171.8 117 73.5
MD13G1063500 Malus domestica HOM05D006060 ORTHO05D007268 5.4e-41 171.0 115 74.8
Potri.010G159200 Populus trichocarpa HOM05D006060 ORTHO05D007268 5.4e-41 171.0 115 75.7
Ca_24569_v3 Cicer arietinum L. HOM05D006060 ORTHO05D007268 9.1e-41 170.2 117 75.2
MD16G1062000 Malus domestica HOM05D006060 ORTHO05D007268 1.2e-40 169.9 115 73.9
Prupe.1G285900 Prunus persica HOM05D006060 ORTHO05D007268 1.2e-40 169.9 115 74.8
Thecc.02G332700 Theobroma cacao HOM05D006060 ORTHO05D007268 1.2e-40 169.9 117 74.4
FAN22G0197 Fragaria x ananassa HOM05D006060 ORTHO05D007268 2.7e-40 168.7 122 73.0
PGR102G1832 Punica granatum HOM05D006060 ORTHO05D007268 3.5e-40 168.3 117 73.5
Sed0026741 Sechium edule HOM05D006060 ORTHO05D007268 3.5e-40 168.3 117 70.9
Dinv16724 Davidia involucrata HOM05D006060 ORTHO05D007268 4.5e-40 167.9 117 74.4
Potri.008G095100 Populus trichocarpa HOM05D006060 ORTHO05D007268 4.5e-40 167.9 115 73.9
Glyma.05G201000 Glycine max HOM05D006060 ORTHO05D007268 7.7e-40 167.2 115 74.8
Psat2g129720 Pisum sativum HOM05D006060 ORTHO05D007268 7.7e-40 167.2 117 73.5
ClCG00G002570 Citrullus lanatus HOM05D006060 ORTHO05D007268 1.7e-39 166.0 130 67.7
ClCG05G023750 Citrullus lanatus HOM05D006060 ORTHO05D007268 1.7e-39 166.0 130 67.7
Dinv34077 Davidia involucrata HOM05D006060 ORTHO05D007268 2.3e-39 165.6 117 73.5
Phvul.002G282400 Phaseolus vulgaris HOM05D006060 ORTHO05D007268 2.3e-39 165.6 115 72.2
Aqoxy3G00506 Aquilegia oxysepala HOM05D006060 ORTHO05D007268 2.9e-39 165.2 117 73.5
Duzib248G0204 Durio zibethinus HOM05D006060 ORTHO05D007268 2.9e-39 165.2 115 72.2
Gohir.A13G081800 Gossypium hirsutum HOM05D006060 ORTHO05D007268 2.9e-39 165.2 115 71.3
Gohir.D13G081600 Gossypium hirsutum HOM05D006060 ORTHO05D007268 2.9e-39 165.2 115 71.3
Gorai.013G093500 Gossypium raimondii HOM05D006060 ORTHO05D007268 2.9e-39 165.2 115 71.3
Thhalv10009087m.g Eutrema salsugineum HOM05D006060 ORTHO05D007268 3.8e-39 164.9 117 74.4
Sp1g22270 Schrenkiella parvula HOM05D006060 ORTHO05D007268 3.8e-39 164.9 117 73.5
THA.LOC104822014 Tarenaya hassleriana HOM05D006060 ORTHO05D007268 3.8e-39 164.9 117 72.6
CANSAT64G1324 Cannabis sativa HOM05D006060 ORTHO05D007268 5.0e-39 164.5 117 73.5
HanXRQChr15g0477061 Helianthus annuus HOM05D006060 ORTHO05D007268 5.0e-39 164.5 117 74.4
Sc11g0002390 Simmondsia chinensis HOM05D006060 ORTHO05D007268 8.6e-39 163.7 115 72.2
arahy.Tifrunner.gnm1.ann1.GS86GR Arachis hypogaea HOM05D006060 ORTHO05D007268 1.5e-38 162.9 117 70.9
CARHR025490 Cardamine hirsuta HOM05D006060 ORTHO05D007268 1.5e-38 162.9 117 73.5
Carub.0001s2455 Capsella rubella HOM05D006060 ORTHO05D007268 2.5e-38 162.2 117 72.6
Glyma.08G008300 Glycine max HOM05D006060 ORTHO05D007268 2.5e-38 162.2 117 71.8
Lj2g0026655 Lotus japonicus HOM05D006060 ORTHO05D007268 2.5e-38 162.2 115 72.2
QL03p072164 Quercus lobata HOM05D006060 ORTHO05D007268 3.3e-38 161.8 140 64.3
QL03p072544 Quercus lobata HOM05D006060 ORTHO05D007268 3.3e-38 161.8 140 64.3
VMungo0251G0770 Vigna mungo HOM05D006060 ORTHO05D007268 3.3e-38 161.8 115 71.3
AL1G39270 Arabidopsis lyrata HOM05D006060 ORTHO05D007268 4.2e-38 161.4 117 72.6
TPR.G24456 Trifolium pratense HOM05D006060 ORTHO05D007268 4.2e-38 161.4 115 69.6
AT1G26470 Arabidopsis thaliana HOM05D006060 ORTHO05D007268 5.5e-38 161.0 117 72.6
BcaB03g14067 Brassica carinata HOM05D006060 ORTHO05D007268 5.5e-38 161.0 117 71.8
CSS0014880 Camellia sinensis var. sinensis HOM05D006060 ORTHO05D007268 5.5e-38 161.0 117 72.6
Eucgr.G02454 Eucalyptus grandis HOM05D006060 ORTHO05D007268 9.5e-38 160.2 115 71.3
HPP92_014051 Vanilla planifolia HOM05D006060 ORTHO05D007268 9.5e-38 160.2 117 70.9
ATR0064G055 Amborella trichopoda HOM05D006060 ORTHO05D007268 4.7e-37 157.9 115 69.6
BcaC06g35142 Brassica carinata HOM05D006060 ORTHO05D007268 4.7e-37 157.9 117 72.6
ECA246G0948 Erigeron canadensis HOM05D006060 ORTHO05D007268 4.7e-37 157.9 117 71.8
MBI16_g10268_MAGBIO Magnolia biondii HOM05D006060 ORTHO05D007268 4.7e-37 157.9 115 72.2
Nn4g23399 Nelumbo nucifera HOM05D006060 ORTHO05D007268 8.0e-37 157.1 117 70.9
PSO017G1874 Papaver somniferum HOM05D006060 ORTHO05D007268 8.0e-37 157.1 117 70.9
Lsat_1_v5_gn_3_55960 Lactuca sativa HOM05D006060 ORTHO05D007268 1.0e-36 156.8 117 71.8
Hund05841 Selenicereus undatus HOM05D006060 ORTHO05D007268 1.0e-36 156.8 117 71.8
EL10Ac6g14984 Beta vulgaris HOM05D006060 ORTHO05D007268 1.4e-36 156.4 128 67.2
C05p24530 Brassica napus HOM05D006060 ORTHO05D007268 1.8e-36 156.0 117 70.9
TWI31G0802 Tripterygium wilfordii HOM05D006060 ORTHO05D007268 2.3e-36 155.6 127 66.1
MD02G1257200 Malus domestica HOM05D006060 ORTHO05D007268 4.0e-36 154.8 115 67.8
Duzib251G0249 Durio zibethinus HOM05D006060 ORTHO05D007268 5.2e-36 154.5 117 67.5
Medtr5g044200 Medicago truncatula HOM05D006060 ORTHO05D007268 5.2e-36 154.5 117 65.8
PSO478G3582 Papaver somniferum HOM05D006060 ORTHO05D007268 5.2e-36 154.5 117 70.1
CAN.G616.32 Capsicum annuum HOM05D006060 ORTHO05D007268 6.8e-36 154.1 115 69.6
A07p12940 Brassica napus HOM05D006060 ORTHO05D007268 3.4e-35 151.8 122 69.7
BolC7t42457H Brassica oleracea HOM05D006060 ORTHO05D007268 3.4e-35 151.8 122 69.7
HanXRQChr12g0375301 Helianthus annuus HOM05D006060 ORTHO05D007268 3.4e-35 151.8 117 69.2
CDE02G4092 Ceratophyllum demersum HOM05D006060 ORTHO05D007268 7.5e-35 150.6 117 70.1
PGSC0003DMG400028321 Solanum tuberosum HOM05D006060 ORTHO05D007268 7.5e-35 150.6 115 68.7
Sopen05g007220 Solanum pennellii HOM05D006060 ORTHO05D007268 1.7e-34 149.4 115 67.8
A09p39890 Brassica napus HOM05D006060 ORTHO05D007268 2.2e-34 149.1 123 66.7
C07p19380 Brassica napus HOM05D006060 ORTHO05D007268 2.8e-34 148.7 130 65.4
Lalb_Chr04g0255711 Lupinus albus HOM05D006060 ORTHO05D007268 3.7e-34 148.3 117 64.1
SalBow2G0810 Salvia bowleyana HOM05D006060 ORTHO05D007268 3.7e-34 148.3 117 67.5
Solyc05g012400.4 Solanum lycopersicum HOM05D006060 ORTHO05D007268 3.7e-34 148.3 115 67.0
Aa31LG7G8620 Aethionema arabicum HOM05D006060 ORTHO05D007268 4.9e-34 147.9 123 65.0
Hund25185 Selenicereus undatus HOM05D006060 ORTHO05D007268 4.9e-34 147.9 151 57.6
BolC5t31187H Brassica oleracea HOM05D006060 ORTHO05D007268 8.3e-34 147.1 129 64.3
SGA_v2.0_scaffold36G14451 Striga asiatica HOM05D006060 ORTHO05D007268 1.1e-33 146.7 117 63.2
MSTRG.7750 Avicennia marina HOM05D006060 ORTHO05D007268 1.2e-32 143.3 114 66.7
AUR62003112 Chenopodium quinoa HOM05D006060 ORTHO05D007268 2.7e-32 142.1 172 51.7
unitig_747.g21188 Utricularia gibba HOM05D006060 ORTHO05D007268 2.7e-32 142.1 117 65.8
Medtr6g053980 Medicago truncatula HOM05D006060 ORTHO05D007268 3.5e-32 141.7 114 61.4
Peaxi162Scf00175g00019 Petunia axillaris HOM05D006060 ORTHO05D007268 7.8e-32 140.6 90 74.4
Os05g0512500 Oryza sativa ssp. japonica HOM05D006060 ORTHO05D007268 1.3e-31 139.8 115 60.9
Migut.L01198 Erythranthe guttata HOM05D006060 ORTHO05D007268 2.9e-31 138.7 114 64.9
FAN07G0043 Fragaria x ananassa HOM05D006060 ORTHO05D007268 2.9e-31 138.7 115 67.0
Oeu048147.1 Olea europaea HOM05D006060 ORTHO05D007268 6.6e-31 137.5 117 60.7
Zm00001eb292660 Zea mays HOM05D006060 ORTHO05D007268 8.6e-31 137.1 111 63.1
FAN12G2760 Fragaria x ananassa HOM05D006060 ORTHO05D007268 2.5e-30 135.6 115 66.1
Nitab4.5_0000231g0430 Nicotiana tabacum HOM05D006060 ORTHO05D007268 2.1e-29 132.5 88 71.6
SEGI_32210 Sequoiadendron giganteum HOM05D006060 ORTHO05D007268 2.1e-29 132.5 117 61.5
SGA_v2.0_scaffold16G07773 Striga asiatica HOM05D006060 ORTHO05D007268 2.8e-29 132.1 129 55.8
Actinidia32300 Actinidia chinensis HOM05D004724 ORTHO05D007268 3.6e-29 131.7 85 74.1
PGSC0003DMG400042856 Solanum tuberosum HOM05D006060 ORTHO05D007268 2.3e-28 129.0 114 58.8
Sabra10G0120900 Salix brachista HOM05D006060 ORTHO05D007268 3.0e-28 128.6 117 64.1
FAN17G1885 Fragaria x ananassa HOM05D006060 ORTHO05D007268 4.0e-28 128.3 108 66.7
Ah.03g138960 Amaranthus hybridus HOM05D006060 ORTHO05D007268 1.2e-27 126.7 117 63.2
arahy.Tifrunner.gnm1.ann1.KWWI2Y Arachis hypogaea HOM05D006060 ORTHO05D007268 2.0e-27 125.9 130 58.5
Sabra08G0071500 Salix brachista HOM05D006060 ORTHO05D007268 3.4e-27 125.2 135 51.1
AagrBONN_evm.TU.Sc2ySwM_228.4858 Anthoceros agrestis HOM05D006821 ORTHO05D007268 4.4e-27 124.8 112 62.5
BraA07t29067Z Brassica rapa HOM05D006060 ORTHO05D007268 1.3e-26 123.2 117 61.5
Lalb_Chr10g0098731 Lupinus albus HOM05D006060 ORTHO05D007268 2.2e-26 122.5 96 60.4
Actinidia28644 Actinidia chinensis HOM05D006060 ORTHO05D007268 6.4e-26 120.9 119 58.8
Sopen05g007230 Solanum pennellii HOM05D006060 ORTHO05D007268 2.4e-25 119.0 114 56.1
A03p24590 Brassica napus HOM05D006060 ORTHO05D007268 3.2e-25 118.6 115 59.1
Mapoly0056s0111 Marchantia polymorpha HOM05D006060 ORTHO05D007268 3.2e-25 118.6 105 59.0
Solyc05g012410.2 Solanum lycopersicum HOM05D006060 ORTHO05D007268 4.1e-25 118.2 114 56.1
Haze_11918 Corylus avellana HOM05D006060 ORTHO05D007268 5.4e-25 117.9 70 77.1
Nitab4.5_0004171g0060 Nicotiana tabacum HOM05D006060 ORTHO05D007268 5.4e-25 117.9 84 70.2
BraA09t39056Z Brassica rapa HOM05D006060 ORTHO05D007268 1.2e-24 116.7 115 58.3
AUR62007927 Chenopodium quinoa HOM05D006060 ORTHO05D007268 1.6e-24 116.3 168 45.8
SMO351G0453 Selaginella moellendorffii HOM05D006060 ORTHO05D007268 2.7e-24 115.5 109 56.0
BraA09t39488Z Brassica rapa HOM05D006060 ORTHO05D007268 3.5e-24 115.2 100 61.0
Cc11_g12110 Coffea canephora HOM05D006060 ORTHO05D007268 1.2e-21 106.7 70 70.0
COL.COLO4_27898 Corchorus olitorius HOM05D006060 ORTHO05D007268 6.2e-21 104.4 69 71.0
Pp3c14_19070 Physcomitrium patens HOM05D006060 ORTHO05D007268 1.5e-19 99.8 105 51.4
PGSC0003DMG400041308 Solanum tuberosum HOM05D006060 ORTHO05D007268 6.4e-18 94.4 92 56.5
C02p24560 Brassica napus HOM05D006060 ORTHO05D007268 1.5e-14 83.2 82 53.7
TPR.G29681 Trifolium pratense HOM05D006060 ORTHO05D007268 6.2e-13 77.8 60 63.3
DCAR_007189 Daucus carota HOM05D006060 ORTHO05D007268 2.6e-11 72.4 51 64.7
CBR_g4585 Chara braunii HOM05D006060 ORTHO05D007268 9.9e-11 70.5 66 48.5
A07p29750 Brassica napus HOM05D006060 ORTHO05D007268 2.9e-10 68.9 87 49.4
BcaB03g11990 Brassica carinata HOM05D006060 ORTHO05D007268 7.1e-09 64.3 49 63.3


User provided reference genes

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