Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01012041001 Vitis vinifera HOM05D004567 ORTHO05D005726 0.0e+00 1104.0 553 100.0
Cfa022165 Carpinus fangiana HOM05D004567 ORTHO05D005726 1.5e-234 816.2 558 73.8
TAR369G0463 Trochodendron aralioides HOM05D004567 ORTHO05D005726 4.4e-234 814.7 558 74.7
Haze_02919 Corylus avellana HOM05D004567 ORTHO05D005726 1.7e-225 786.2 544 73.5
Thecc.02G160600 Theobroma cacao HOM05D004567 ORTHO05D005726 9.1e-224 780.4 558 71.5
Gorai.012G133500 Gossypium raimondii HOM05D004567 ORTHO05D005726 1.1e-221 773.5 552 69.9
TWI74G0160 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 1.5e-221 773.1 560 70.9
Gohir.D04G147500 Gossypium hirsutum HOM05D004567 ORTHO05D005726 3.2e-221 771.9 552 69.7
Gohir.A04G107700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 4.7e-220 768.1 552 69.4
Hma1.2p1_1513F.1_g288000 Hydrangea macrophylla HOM05D004567 ORTHO05D005726 6.1e-220 767.7 559 70.7
Duzib132G0874 Durio zibethinus HOM05D004567 ORTHO05D005726 1.4e-219 766.5 550 70.9
Manes.11G065400 Manihot esculenta HOM05D004567 ORTHO05D005726 9.8e-218 760.4 556 70.9
TWI53G0531 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 4.8e-217 758.1 576 67.7
Ciclev10031151m.g Citrus clementina HOM05D004567 ORTHO05D005726 1.8e-216 756.1 527 73.2
Potri.007G071000 Populus trichocarpa HOM05D004567 ORTHO05D005726 3.5e-215 751.9 549 70.3
CANSAT25G2547 Cannabis sativa HOM05D004567 ORTHO05D005726 1.9e-213 746.1 558 67.9
QL04p025799 Quercus lobata HOM05D004567 ORTHO05D005726 1.9e-213 746.1 596 66.4
Actinidia11176 Actinidia chinensis HOM05D004567 ORTHO05D005726 2.5e-213 745.7 563 68.4
Dinv41785 Davidia involucrata HOM05D004567 ORTHO05D005726 6.1e-212 741.1 512 76.0
Atru.chr10.1157 Acer truncatum HOM05D004567 ORTHO05D005726 1.8e-211 739.6 550 69.6
MBI01_g01364_MAGBIO Magnolia biondii HOM05D004567 ORTHO05D005726 2.3e-211 739.2 564 68.1
Sabra07G0059700 Salix brachista HOM05D004567 ORTHO05D005726 2.4e-208 729.2 547 68.4
MD07G1086800 Malus domestica HOM05D004567 ORTHO05D005726 1.6e-207 726.5 545 68.8
Manes.04G103500 Manihot esculenta HOM05D004567 ORTHO05D005726 1.3e-206 723.4 560 66.2
Prupe.2G113700 Prunus persica HOM05D004567 ORTHO05D005726 1.3e-206 723.4 545 68.4
RcHm_v2.0_Chr1g0343571 Rosa chinensis HOM05D004567 ORTHO05D005726 1.1e-205 720.3 544 66.9
CsaV3_4G009100 Cucumis sativus L. HOM05D004567 ORTHO05D005726 1.9e-205 719.5 550 67.5
FAN10G2749 Fragaria x ananassa HOM05D004567 ORTHO05D005726 2.5e-205 719.2 544 66.5
FAN03G0634 Fragaria x ananassa HOM05D004567 ORTHO05D005726 2.1e-204 716.1 544 66.4
Medtr8g009530 Medicago truncatula HOM05D004567 ORTHO05D005726 3.6e-204 715.3 545 65.7
Cc00_g04630 Coffea canephora HOM05D004567 ORTHO05D005726 4.7e-204 714.9 554 66.2
FAN01G2992 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.0e-203 713.8 544 66.4
CiPaw.14G015900 Carya illinoinensis HOM05D004567 ORTHO05D005726 1.4e-203 713.4 499 72.3
FvH4_7g08600 Fragaria vesca HOM05D004567 ORTHO05D005726 1.4e-203 713.4 544 65.8
Eucgr.J00860 Eucalyptus grandis HOM05D004567 ORTHO05D005726 2.3e-203 712.6 561 65.8
FAN06G1075 Fragaria x ananassa HOM05D004567 ORTHO05D005726 3.1e-203 712.2 544 65.8
FAN10G3814 Fragaria x ananassa HOM05D004567 ORTHO05D005726 8.9e-203 710.7 544 66.2
Ca_23147_v3 Cicer arietinum L. HOM05D004567 ORTHO05D005726 1.5e-202 709.9 546 65.2
Lj3g0010315 Lotus japonicus HOM05D004567 ORTHO05D005726 1.5e-202 709.9 547 65.8
PSO063G1783 Papaver somniferum HOM05D004567 ORTHO05D005726 1.5e-202 709.9 557 66.2
Nn4g22147 Nelumbo nucifera HOM05D004567 ORTHO05D005726 9.8e-202 707.2 557 66.4
Glyma.07G121300 Glycine max HOM05D004567 ORTHO05D005726 1.3e-201 706.8 558 63.8
PSO832G3127 Papaver somniferum HOM05D004567 ORTHO05D005726 2.2e-201 706.1 557 65.9
Lalb_Chr13g0290871 Lupinus albus HOM05D004567 ORTHO05D005726 1.4e-200 703.4 541 66.9
MD02G1226800 Malus domestica HOM05D004567 ORTHO05D005726 1.9e-200 703.0 545 67.2
Gohir.D12G137700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 2.4e-200 702.6 556 65.8
DCAR_011423 Daucus carota HOM05D004567 ORTHO05D005726 4.1e-200 701.8 558 64.7
CSS0021756 Camellia sinensis var. sinensis HOM05D004567 ORTHO05D005726 5.4e-200 701.4 569 65.6
Sopen11g010070 Solanum pennellii HOM05D004567 ORTHO05D005726 2.0e-199 699.5 562 64.2
Oeu037755.1 Olea europaea HOM05D004567 ORTHO05D005726 2.3e-198 696.0 556 64.9
Gorai.008G149200 Gossypium raimondii HOM05D004567 ORTHO05D005726 3.9e-198 695.3 558 65.4
Psat4g218760 Pisum sativum HOM05D004567 ORTHO05D005726 2.5e-197 692.6 546 63.9
Sed0017461 Sechium edule HOM05D004567 ORTHO05D005726 7.3e-197 691.0 554 64.1
arahy.Tifrunner.gnm1.ann1.JL30IG Arachis hypogaea HOM05D004567 ORTHO05D005726 2.1e-196 689.5 552 65.8
Migut.N03351 Erythranthe guttata HOM05D004567 ORTHO05D005726 2.1e-196 689.5 554 64.4
TPR.G17362 Trifolium pratense HOM05D004567 ORTHO05D005726 2.8e-196 689.1 545 64.6
Phvul.010G040700 Phaseolus vulgaris HOM05D004567 ORTHO05D005726 3.6e-196 688.7 552 63.6
arahy.Tifrunner.gnm1.ann1.2EVD6N Arachis hypogaea HOM05D004567 ORTHO05D005726 6.2e-196 688.0 557 65.5
VMungo0331G0285 Vigna mungo HOM05D004567 ORTHO05D005726 8.9e-195 684.1 550 62.2
Aqoxy7G00425 Aquilegia oxysepala HOM05D004567 ORTHO05D005726 3.4e-194 682.2 574 62.4
Peaxi162Scf01013g00124 Petunia axillaris HOM05D004567 ORTHO05D005726 6.4e-193 677.9 510 67.1
Ah.01g012240 Amaranthus hybridus HOM05D004567 ORTHO05D005726 9.2e-192 674.1 557 61.8
THA.LOC104815215 Tarenaya hassleriana HOM05D004567 ORTHO05D005726 2.7e-191 672.5 557 63.0
vmacro12414 Vaccinium macrocarpon HOM05D004567 ORTHO05D005726 3.5e-191 672.2 698 53.4
AUR62017692 Chenopodium quinoa HOM05D004567 ORTHO05D005726 1.3e-190 670.2 585 59.8
PSO339G1936 Papaver somniferum HOM05D004567 ORTHO05D005726 2.1e-188 662.9 560 63.4
EL10Ac9g22943 Beta vulgaris HOM05D004567 ORTHO05D005726 3.6e-188 662.1 571 60.6
Lj7A481G48 Lonicera japonica HOM05D004567 ORTHO05D005726 3.1e-187 659.1 571 64.3
AT1G50120 Arabidopsis thaliana HOM05D004567 ORTHO05D005726 5.2e-187 658.3 550 62.0
Glyma.03G102500 Glycine max HOM05D004567 ORTHO05D005726 2.0e-186 656.4 566 62.0
AL1G57750 Arabidopsis lyrata HOM05D004567 ORTHO05D005726 2.6e-186 656.0 552 62.5
CARHR040180 Cardamine hirsuta HOM05D004567 ORTHO05D005726 2.9e-185 652.5 552 62.1
SalBow7G4790 Salvia bowleyana HOM05D004567 ORTHO05D005726 4.9e-185 651.7 563 60.0
SGA_v2.0_scaffold24G10556 Striga asiatica HOM05D004567 ORTHO05D005726 8.3e-185 651.0 559 62.3
Thhalv10011376m.g Eutrema salsugineum HOM05D004567 ORTHO05D005726 7.8e-183 644.4 550 61.3
Carub.0001s3927 Capsella rubella HOM05D004567 ORTHO05D005726 1.1e-181 640.6 552 61.4
Sp1g37000 Schrenkiella parvula HOM05D004567 ORTHO05D005726 1.6e-180 636.7 550 60.7
Gohir.A12G134100 Gossypium hirsutum HOM05D004567 ORTHO05D005726 2.8e-180 636.0 556 61.5
Aa31LG10G4020 Aethionema arabicum HOM05D004567 ORTHO05D005726 4.7e-180 635.2 575 58.8
ECA246G0539 Erigeron canadensis HOM05D004567 ORTHO05D005726 8.1e-180 634.4 542 60.0
Lsat_1_v5_gn_5_37660 Lactuca sativa HOM05D004567 ORTHO05D005726 3.4e-178 629.0 551 59.5
Sc11g0003400 Simmondsia chinensis HOM05D004567 ORTHO05D005726 3.8e-177 625.5 556 60.6
ATR0605G273 Amborella trichopoda HOM05D004567 ORTHO05D005726 9.3e-176 620.9 574 56.8
A08p03320 Brassica napus HOM05D004567 ORTHO05D005726 9.3e-176 620.9 553 59.0
C03p89490 Brassica napus HOM05D004567 ORTHO05D005726 6.0e-175 618.2 554 58.3
BolC3t21263H Brassica oleracea HOM05D004567 ORTHO05D005726 6.0e-175 618.2 554 59.0
BcaB04g17271 Brassica carinata HOM05D004567 ORTHO05D005726 7.8e-175 617.8 553 58.6
BolC6t35627H Brassica oleracea HOM05D004567 ORTHO05D005726 1.1e-173 614.0 551 58.3
BraA06t23544Z Brassica rapa HOM05D004567 ORTHO05D005726 1.6e-172 610.1 551 57.7
Duzib052G0538 Durio zibethinus HOM05D004567 ORTHO05D005726 1.6e-172 610.1 557 60.1
BcaC08g43196 Brassica carinata HOM05D004567 ORTHO05D005726 4.8e-172 608.6 551 57.9
Solyc11g019960.2 Solanum lycopersicum HOM05D004567 ORTHO05D005726 1.4e-171 607.1 514 61.9
BcaB07g33468 Brassica carinata HOM05D004567 ORTHO05D005726 1.2e-170 604.0 546 59.0
C06p05010 Brassica napus HOM05D004567 ORTHO05D005726 1.5e-170 603.6 551 57.2
BraA08t32365Z Brassica rapa HOM05D004567 ORTHO05D005726 1.5e-170 603.6 598 54.3
AUR62015228 Chenopodium quinoa HOM05D004567 ORTHO05D005726 7.6e-170 601.3 555 57.8
Nitab4.5_0000167g0100 Nicotiana tabacum HOM05D004567 ORTHO05D005726 9.3e-168 594.3 413 72.6
CDE02G2175 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 2.7e-167 592.8 524 59.4
HPP92_002998 Vanilla planifolia HOM05D004567 ORTHO05D005726 3.0e-166 589.3 541 57.7
A06p03360 Brassica napus HOM05D004567 ORTHO05D005726 3.9e-166 589.0 560 55.7
CAN.G2.11 Capsicum annuum HOM05D004567 ORTHO05D005726 2.1e-164 583.2 448 65.6
HanXRQChr12g0379741 Helianthus annuus HOM05D004567 ORTHO05D005726 1.4e-163 580.5 556 55.8
Rhsim06G0125800 Rhododendron simsii HOM05D004567 ORTHO05D005726 4.3e-157 558.9 706 48.2
Nn3g16289 Nelumbo nucifera HOM05D004567 ORTHO05D005726 9.0e-155 551.2 487 60.2
CDE08G0826 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 1.2e-154 550.8 568 54.9
Hund24369 Selenicereus undatus HOM05D004567 ORTHO05D005726 3.8e-137 492.7 381 67.7
Cpa.g.sc0.161 Carica papaya HOM05D004567 ORTHO05D005726 7.9e-135 485.0 341 75.1
PGSC0003DMG401027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 4.4e-125 452.6 323 71.8
MELO3C018973.2 Cucumis melo HOM05D004567 ORTHO05D005726 1.4e-123 447.6 397 59.4
Nitab4.5_0004158g0010 Nicotiana tabacum HOM05D004567 ORTHO05D005726 4.2e-120 436.0 312 72.4
Oeu029993.1 Olea europaea HOM05D004567 ORTHO05D005726 5.2e-118 429.1 339 66.7
A06p03590 Brassica napus HOM05D004567 ORTHO05D005726 1.2e-106 391.3 330 63.3
Os06g0618600 Oryza sativa ssp. japonica HOM05D004567 ORTHO05D005726 5.9e-106 389.0 376 58.0
Zm00001eb066810 Zea mays HOM05D004567 ORTHO05D005726 7.5e-101 372.1 382 53.4
Mapoly0026s0045 Marchantia polymorpha HOM05D004567 ORTHO05D005726 2.2e-100 370.5 527 40.4
unitig_578.g16282 Utricularia gibba HOM05D004567 ORTHO05D005726 1.1e-96 358.2 359 54.9
Pp3c20_6950 Physcomitrium patens HOM05D004567 ORTHO05D005726 2.0e-93 347.4 547 39.7
ClCG10G008360 Citrullus lanatus HOM05D004567 ORTHO05D005726 2.6e-93 347.1 347 56.5
Pp3c23_19720 Physcomitrium patens HOM05D004567 ORTHO05D005726 5.7e-93 345.9 523 40.2
SMO367G1304 Selaginella moellendorffii HOM05D004567 ORTHO05D005726 7.0e-91 339.0 537 38.4
AagrBONN_evm.TU.Sc2ySwM_228.3324 Anthoceros agrestis HOM05D004567 ORTHO05D005726 1.3e-89 334.7 526 37.6
SEGI_15833 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 1.2e-77 295.0 338 49.4
BraA06t23566Z Brassica rapa HOM05D004567 ORTHO05D005726 8.6e-65 252.3 147 82.3
Nitab4.5_0004158g0020 Nicotiana tabacum HOM05D004567 ORTHO05D005726 2.1e-63 247.7 207 58.0
C06p05100 Brassica napus HOM05D004567 ORTHO05D005726 4.2e-59 233.4 167 70.7
Cfa022169 Carpinus fangiana HOM05D004567 ORTHO05D005726 1.9e-56 224.6 133 82.7
Duzib248G1520 Durio zibethinus HOM05D004567 ORTHO05D005726 1.6e-55 221.5 135 79.3
Oeu029992.1 Olea europaea HOM05D004567 ORTHO05D005726 3.6e-55 220.3 152 71.7
PGSC0003DMG402027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 1.1e-54 218.8 199 54.3
unitig_44.g31559 Utricularia gibba HOM05D004567 ORTHO05D005726 1.7e-52 211.5 141 71.6
Oeu029994.1 Olea europaea HOM05D004567 ORTHO05D005726 7.4e-48 196.1 224 50.4
CBR_g8998 Chara braunii HOM05D004567 ORTHO05D005726 4.5e-45 186.8 581 26.9
ClCG10G008380 Citrullus lanatus HOM05D004567 ORTHO05D005726 4.5e-45 186.8 105 82.9
Rhsim06G0125500 Rhododendron simsii HOM05D004567 ORTHO05D005726 5.8e-37 159.8 155 56.8
ClCG10G008350 Citrullus lanatus HOM05D004567 ORTHO05D005726 2.8e-31 141.0 131 56.5
Rhsim04G0129600 Rhododendron simsii HOM05D004567 ORTHO05D005726 3.7e-31 140.6 99 67.7
Cpa.g.sc0.162 Carica papaya HOM05D004567 ORTHO05D005726 5.1e-25 120.2 115 58.3
unitig_578.g16281 Utricularia gibba HOM05D004567 ORTHO05D005726 8.2e-23 112.8 147 44.2
Sed0015165 Sechium edule HOM05D004567 ORTHO05D005726 1.1e-22 112.5 130 45.4
FAN11G1323 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.5e-21 108.6 113 52.2
Rhsim06G0125600 Rhododendron simsii HOM05D004567 ORTHO05D005726 2.6e-21 107.8 77 67.5
Actinidia24396 Actinidia chinensis HOM05D004567 ORTHO05D005726 1.1e-19 102.4 113 47.8
Rhsim06G0125400 Rhododendron simsii HOM05D004567 ORTHO05D005726 1.4e-19 102.1 53 86.8
SHI31088 Sapria himalayana HOM05D004567 ORTHO05D005726 1.2e-18 99.0 111 48.6
SEGI_26710 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 4.4e-16 90.5 104 40.4
Sed0023875 Sechium edule HOM05D004567 ORTHO05D005726 1.3e-15 89.0 75 57.3
TAR623G0420 Trochodendron aralioides HOM05D004567 ORTHO05D037809 1.8e-14 85.1 154 41.6
Rhsim04G0129400 Rhododendron simsii HOM05D004567 ORTHO05D005726 4.5e-13 80.5 97 44.3
QL01p003984 Quercus lobata HOM05D004567 ORTHO05D000318 8.5e-12 76.3 77 46.8
SEGI_29421 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 1.1e-08 65.9 71 40.8
Cre06.g258400 Chlamydomonas reinhardtii HOM05D004567 ORTHO05D005726 8.2e-07 59.7 135 28.1
Rhsim01G0150500 Rhododendron simsii HOM05D004567 ORTHO05D005726 8.2e-07 59.7 61 50.8
FvH4_7g08791 Fragaria vesca HOM05D004567 ORTHO05D045614 7.0e-06 56.6 57 54.4


User provided reference genes

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