Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 3.5e-98 361.7 193 100.0
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.5e-85 319.7 192 86.5
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 1.1e-83 313.5 193 82.9
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.1e-83 313.5 192 83.3
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 2.5e-83 312.4 193 83.4
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 3.2e-83 312.0 193 81.9
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 1.8e-81 306.2 193 85.0
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 5.7e-80 301.2 193 79.8
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 2.8e-79 298.9 193 78.8
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 3.7e-79 298.5 193 83.4
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 6.3e-79 297.7 193 78.8
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 6.3e-79 297.7 192 78.1
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 1.8e-78 296.2 193 79.3
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 4.1e-78 295.0 193 77.7
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 5.3e-78 294.7 193 78.8
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 6.9e-78 294.3 193 77.2
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 6.9e-78 294.3 193 78.2
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 9.0e-78 293.9 193 77.2
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 2.0e-77 292.7 193 77.2
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 4.5e-77 291.6 192 76.0
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 5.9e-77 291.2 193 77.2
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 5.9e-77 291.2 193 77.2
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 5.9e-77 291.2 175 85.1
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 1.0e-76 290.4 193 77.2
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.3e-76 290.0 193 77.2
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.7e-76 289.7 193 75.6
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 1.7e-76 289.7 193 77.2
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 2.9e-76 288.9 193 75.1
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 6.5e-76 287.7 193 74.6
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 8.5e-76 287.3 193 77.2
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 8.5e-76 287.3 193 75.1
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.1e-75 287.0 193 75.6
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.1e-75 287.0 193 75.6
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.1e-75 287.0 193 75.6
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.4e-75 286.6 193 74.6
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.4e-75 286.6 193 75.6
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 2.5e-75 285.8 193 75.1
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 4.2e-75 285.0 193 74.1
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 9.4e-75 283.9 193 74.1
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 1.2e-74 283.5 193 74.6
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 2.1e-74 282.7 202 73.8
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 2.7e-74 282.3 193 74.1
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 3.6e-74 282.0 193 73.6
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 4.6e-74 281.6 193 74.1
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 2.3e-73 279.3 193 73.1
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 3.0e-73 278.9 193 73.1
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 3.9e-73 278.5 193 74.1
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 8.8e-73 277.3 193 73.1
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 1.5e-72 276.6 193 74.6
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 1.7e-71 273.1 193 72.0
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 1.7e-71 273.1 193 72.0
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 3.7e-71 271.9 193 71.5
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 4.8e-71 271.6 193 71.5
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 4.8e-71 271.6 193 74.1
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 4.8e-71 271.6 193 74.1
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 6.3e-71 271.2 217 65.9
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 6.3e-71 271.2 192 73.4
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 8.2e-71 270.8 189 74.1
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 1.8e-70 269.6 193 71.0
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 2.4e-70 269.2 193 71.0
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 1.2e-69 266.9 193 71.5
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.6e-69 265.8 199 71.9
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.0e-68 263.8 156 87.2
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.3e-68 263.5 156 86.5
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 6.5e-68 261.2 193 71.5
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 9.4e-67 257.3 193 67.9
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 1.2e-66 256.9 193 67.9
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 1.6e-66 256.5 193 68.9
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 2.7e-66 255.8 193 64.2
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 2.3e-65 252.7 193 68.9
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 8.8e-65 250.8 193 64.8
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 1.5e-64 250.0 193 66.8
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 4.4e-64 248.4 197 69.0
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.8e-62 243.0 193 65.8
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 3.1e-62 242.3 193 65.8
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 9.1e-62 240.7 193 62.2
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.2e-61 240.4 241 60.2
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.0e-61 239.6 239 58.2
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 4.5e-61 238.4 193 65.8
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 4.5e-61 238.4 241 59.8
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 8.5e-60 234.2 237 58.2
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 4.2e-59 231.9 154 77.3
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 4.2e-59 231.9 153 77.8
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 7.2e-59 231.1 154 76.0
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 9.4e-59 230.7 211 61.1
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 9.4e-59 230.7 268 54.1
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 2.7e-58 229.2 153 75.2
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 4.7e-58 228.4 136 81.6
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 6.1e-58 228.0 192 58.3
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 1.0e-57 227.3 156 73.1
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 1.0e-57 227.3 156 73.1
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 2.0e-56 223.0 209 61.2
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.2e-55 219.5 193 63.7
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 8.5e-52 207.6 156 70.5
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 4.2e-51 205.3 214 57.5
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 2.1e-50 203.0 156 66.7
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 2.8e-47 192.6 120 81.7
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 7.0e-46 188.0 125 76.8
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 5.9e-45 184.9 119 79.0
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 3.8e-44 182.2 192 48.4
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 3.6e-42 175.6 143 60.1
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 3.0e-41 172.6 153 62.1
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 5.2e-41 171.8 181 56.4
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.5e-40 170.2 153 61.4
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 8.6e-36 154.5 99 76.8
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 1.1e-35 154.1 168 48.2
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.5e-35 153.7 116 66.4
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 4.2e-35 152.1 121 67.8
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 8.3e-31 137.9 81 86.4
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 1.2e-29 134.0 81 84.0
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 3.5e-29 132.5 214 44.9
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 1.6e-26 123.6 153 48.4
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 3.1e-25 119.4 177 40.7
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 7.5e-24 114.8 66 86.4
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 9.5e-19 97.8 173 32.9
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 8.1e-18 94.7 192 31.2
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 3.4e-16 89.4 51 86.3
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 2.2e-15 86.7 69 66.7
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 2.5e-11 73.2 53 66.0
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 3.3e-11 72.8 58 67.2
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 1.9e-06 57.0 30 80.0


User provided reference genes

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