Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 7.7e-197 690.3 341 100.0
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 1.7e-148 529.6 326 80.1
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 3.0e-148 528.9 341 76.2
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 7.3e-147 524.2 336 76.2
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 8.0e-146 520.8 329 77.2
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.1e-145 518.8 338 76.0
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.2e-144 516.9 338 75.7
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 2.6e-144 515.8 338 75.4
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 9.8e-144 513.8 327 78.0
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 2.9e-143 512.3 327 77.4
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 6.4e-143 511.1 317 78.9
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.1e-142 510.4 380 69.5
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.1e-142 510.4 346 74.6
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 1.2e-141 506.9 337 75.4
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 3.5e-141 505.4 340 73.5
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 4.6e-141 505.0 336 74.7
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 5.0e-140 501.5 336 74.1
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.5e-139 500.0 338 74.9
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.2e-138 496.9 308 77.9
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 1.6e-138 496.5 319 77.7
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 8.1e-138 494.2 325 75.4
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 8.1e-138 494.2 342 71.9
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 1.4e-137 493.4 340 73.8
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 8.9e-137 490.7 340 73.8
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 8.9e-137 490.7 348 72.1
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 1.2e-136 490.3 319 76.8
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 3.4e-136 488.8 311 76.5
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 7.5e-136 487.6 342 70.8
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 9.8e-136 487.3 339 73.2
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 1.3e-135 486.9 339 73.5
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 3.2e-134 482.3 336 71.7
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 1.6e-133 479.9 316 74.4
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 1.6e-133 479.9 286 80.1
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 2.1e-133 479.6 322 72.7
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 2.1e-133 479.6 289 78.9
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 6.0e-133 478.0 338 72.2
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 7.8e-133 477.6 339 71.1
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 1.0e-132 477.2 285 77.9
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 1.7e-132 476.5 310 76.1
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 2.5e-131 472.6 326 71.5
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 9.5e-131 470.7 291 79.4
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 1.6e-130 469.9 309 76.4
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 3.6e-130 468.8 327 72.5
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 8.1e-130 467.6 338 70.1
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 1.4e-129 466.8 327 72.2
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 1.4e-129 466.8 326 70.9
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 1.7e-127 459.9 288 76.7
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 2.2e-127 459.5 315 72.7
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 3.7e-127 458.8 336 68.2
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 5.4e-126 454.9 342 67.0
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 7.1e-126 454.5 383 62.4
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 9.2e-126 454.1 305 71.8
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.7e-124 449.9 343 68.5
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 3.0e-124 449.1 324 70.1
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 5.1e-124 448.4 342 65.8
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.9e-123 446.4 326 67.2
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.3e-123 445.7 289 73.0
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 3.3e-123 445.7 281 76.5
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 4.3e-123 445.3 320 68.4
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 4.3e-123 445.3 340 67.1
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 7.3e-123 444.5 338 68.0
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.6e-122 443.4 348 65.8
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 1.6e-122 443.4 340 65.9
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 6.2e-122 441.4 340 65.3
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 8.1e-122 441.0 342 65.8
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 8.1e-122 441.0 419 59.7
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 1.1e-121 440.7 339 66.7
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 1.4e-121 440.3 342 65.2
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 1.8e-121 439.9 317 68.5
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 2.4e-121 439.5 342 66.1
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 3.1e-121 439.1 306 71.6
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 8.9e-121 437.6 294 71.4
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 1.5e-120 436.8 350 64.0
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 2.0e-120 436.4 285 73.0
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 2.6e-120 436.0 337 65.3
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 3.4e-120 435.6 285 72.6
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 3.4e-120 435.6 285 73.0
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 1.3e-119 433.7 340 64.7
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 1.7e-119 433.3 310 70.0
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 1.7e-119 433.3 262 77.5
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 8.4e-119 431.0 309 69.3
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 5.4e-118 428.3 288 70.8
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.8e-114 416.0 282 70.9
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 2.4e-113 412.9 290 70.0
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 4.0e-113 412.1 280 73.2
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 9.0e-113 411.0 337 63.2
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 1.2e-112 410.6 411 54.3
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 2.9e-111 406.0 252 77.4
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 1.3e-108 397.1 324 64.5
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 2.5e-107 392.9 339 61.9
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 4.8e-106 388.7 262 69.8
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.1e-102 377.5 311 64.6
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 1.3e-100 370.5 284 64.8
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 2.9e-95 352.8 329 60.2
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 1.4e-94 350.5 362 51.1
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 2.5e-91 339.7 299 54.8
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 1.6e-90 337.0 291 61.9
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 1.8e-89 333.6 277 62.1
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.8e-84 317.0 315 50.5
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 4.3e-83 312.4 237 61.2
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 2.6e-80 303.1 279 56.3
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.8e-71 272.7 157 77.1
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 3.9e-68 262.7 196 64.8
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 3.3e-67 259.6 147 82.3
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.0e-60 238.0 134 86.6
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 2.4e-57 226.9 134 80.6
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 9.1e-57 224.9 135 81.5
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 2.1e-53 213.8 271 41.7
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.2e-48 198.0 284 41.5
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.2e-45 188.0 134 63.4
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.3e-39 167.9 112 72.3
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 2.3e-31 140.6 256 34.4
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 1.5e-30 137.9 311 32.8
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 1.2e-29 134.8 316 27.8
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.7e-15 87.8 99 48.5
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.7e-15 87.8 78 52.6
Actinidia38386 Actinidia chinensis HOM05D004993 ORTHO05D008532 7.3e-14 82.4 84 52.4
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.3e-12 77.4 54 64.8


User provided reference genes

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