Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 6.0e-191 670.6 326 100.0
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 2.7e-130 469.2 347 68.3
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 1.1e-123 447.2 277 76.9
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 1.4e-123 446.8 296 72.3
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 3.1e-123 445.7 258 81.8
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 1.6e-122 443.4 278 75.9
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 1.6e-122 443.4 279 76.0
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 2.0e-122 443.0 275 76.7
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 2.0e-122 443.0 347 65.7
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 7.7e-122 441.0 296 74.0
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 1.3e-121 440.3 279 76.7
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 1.7e-121 439.9 292 73.6
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 3.8e-121 438.7 253 82.2
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 3.8e-121 438.7 259 81.1
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 8.6e-121 437.6 307 69.7
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 8.6e-121 437.6 307 69.7
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 5.5e-120 434.9 263 78.7
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 7.2e-120 434.5 258 79.8
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 1.6e-119 433.3 336 64.9
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.8e-119 432.6 336 64.6
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 4.7e-119 431.8 295 71.2
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 6.1e-119 431.4 260 75.8
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 2.3e-118 429.5 260 76.2
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 2.3e-118 429.5 278 73.0
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 6.8e-118 427.9 260 75.8
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 2.0e-117 426.4 336 65.2
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 2.6e-117 426.0 257 79.0
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 2.6e-117 426.0 275 73.8
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 3.4e-117 425.6 260 75.0
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 5.7e-117 424.9 271 75.3
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 7.5e-117 424.5 336 65.5
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 2.2e-116 422.9 254 78.7
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 2.2e-116 422.9 260 75.4
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 2.2e-116 422.9 261 75.1
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 8.3e-116 421.0 303 69.0
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 1.1e-115 420.6 258 74.8
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 1.1e-115 420.6 278 73.7
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 2.4e-115 419.5 276 74.6
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 3.1e-115 419.1 387 58.7
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 1.2e-114 417.2 312 65.1
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 3.5e-114 415.6 277 70.8
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 4.5e-114 415.2 270 75.6
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 4.5e-114 415.2 261 75.9
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 5.9e-114 414.8 333 62.5
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 7.8e-114 414.5 326 62.3
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 1.0e-113 414.1 327 63.6
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 2.3e-113 412.9 335 63.6
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 5.0e-113 411.8 324 63.3
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 5.0e-113 411.8 260 74.2
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 6.6e-113 411.4 315 67.3
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 8.6e-113 411.0 282 71.3
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 1.6e-111 406.8 277 68.6
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 1.6e-111 406.8 277 68.2
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 1.6e-111 406.8 272 70.2
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 1.6e-111 406.8 272 70.6
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 1.6e-111 406.8 272 70.2
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 1.6e-111 406.8 272 70.2
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 3.6e-111 405.6 272 70.2
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 4.7e-111 405.2 271 70.5
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 6.1e-111 404.8 271 70.5
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 1.4e-110 403.7 260 71.9
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 2.3e-110 402.9 328 62.2
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 4.0e-110 402.1 328 62.2
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 4.0e-110 402.1 296 65.5
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 5.2e-110 401.7 273 68.5
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 1.2e-109 400.6 276 69.6
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 4.4e-109 398.7 238 79.4
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 9.8e-109 397.5 225 83.6
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 3.2e-107 392.5 249 72.3
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 9.2e-107 391.0 254 74.0
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 1.6e-106 390.2 260 70.8
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 2.0e-106 389.8 310 61.6
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 2.7e-106 389.4 250 71.2
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 8.6e-105 384.4 226 80.1
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 1.6e-103 380.2 362 55.5
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 3.1e-102 375.9 306 59.8
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 3.4e-101 372.5 247 70.0
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 2.9e-100 369.4 250 69.6
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 4.1e-99 365.5 271 65.3
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 2.5e-96 356.3 296 59.8
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 4.1e-91 339.0 260 63.8
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 1.2e-90 337.4 279 59.5
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 2.0e-85 320.1 311 53.7
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 7.6e-85 318.2 210 71.9
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 8.4e-84 314.7 182 81.9
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 5.4e-83 312.0 279 54.8
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 1.3e-81 307.4 182 78.6
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 5.1e-81 305.4 198 69.7
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.5e-80 303.9 190 74.7
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 3.6e-79 299.3 228 62.7
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 3.1e-78 296.2 288 53.1
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 4.0e-78 295.8 253 63.2
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 2.6e-77 293.1 231 60.6
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 2.6e-77 293.1 231 60.6
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 4.4e-77 292.4 183 76.0
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 9.3e-75 284.6 191 69.1
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 1.6e-74 283.9 267 50.9
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 1.3e-73 280.8 164 78.7
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 1.3e-68 264.2 305 43.9
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 1.1e-67 261.2 168 71.4
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.4e-62 243.4 277 48.4
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.4e-62 243.4 277 48.4
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 2.9e-60 236.5 195 62.1
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 7.9e-58 228.4 225 50.7
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 2.5e-56 223.4 182 61.5
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 5.5e-51 205.7 131 74.0
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 3.9e-49 199.5 131 70.2
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.3e-47 194.5 131 68.7
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.6e-42 177.6 131 64.9
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 2.6e-37 160.2 245 36.3
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 1.4e-33 147.9 121 58.7
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 4.8e-31 139.4 92 68.5
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 4.5e-29 132.9 284 34.2
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 2.2e-23 114.0 72 72.2
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 1.4e-22 111.3 253 31.6
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 5.5e-19 99.4 258 30.2
Sc04g0006560 Simmondsia chinensis HOM05D006863 ORTHO05D009101 1.4e-17 94.7 107 48.6
Psat2g101840 Pisum sativum HOM05D006863 ORTHO05D044797 2.8e-07 60.5 90 40.0
Haze_17459 Corylus avellana HOM05D006863 ORTHO05D044797 8.3e-07 58.9 106 37.7
AUR62040742 Chenopodium quinoa HOM05D006863 ORTHO05D137998 9.1e-06 55.5 48 58.3


User provided reference genes

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