Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01011804001 Vitis vinifera HOM05D005473 ORTHO05D006543 9.1e-196 686.8 365 100.0
Dinv04903 Davidia involucrata HOM05D005473 ORTHO05D006543 8.9e-143 510.8 365 74.8
QL01p003042 Quercus lobata HOM05D005473 ORTHO05D006543 6.0e-139 498.0 364 71.4
Prupe.1G320100 Prunus persica HOM05D005473 ORTHO05D006543 6.2e-136 488.0 365 70.4
TAR622G1045 Trochodendron aralioides HOM05D005473 ORTHO05D006543 1.5e-134 483.4 362 70.4
Cfa015813 Carpinus fangiana HOM05D000048 ORTHO05D000207 7.6e-134 481.1 365 69.6
MSTRG.875 Avicennia marina HOM05D005473 ORTHO05D006543 2.3e-130 469.5 365 69.9
CiPaw.05G245400 Carya illinoinensis HOM05D005473 ORTHO05D006543 1.9e-129 466.5 367 68.7
CSS0031478 Camellia sinensis var. sinensis HOM05D005473 ORTHO05D006543 3.3e-129 465.7 365 68.8
Hma1.2p1_0114F.1_g055460 Hydrangea macrophylla HOM05D005473 ORTHO05D006543 1.2e-128 463.8 362 68.5
Haze_00685 Corylus avellana HOM05D005473 ORTHO05D006543 3.6e-128 462.2 406 62.8
Nn4g24024 Nelumbo nucifera HOM05D005473 ORTHO05D006543 8.9e-127 457.6 361 67.3
arahy.Tifrunner.gnm1.ann1.GULV0C Arachis hypogaea HOM05D005473 ORTHO05D006543 3.8e-125 452.2 364 65.9
arahy.Tifrunner.gnm1.ann1.45PR62 Arachis hypogaea HOM05D005473 ORTHO05D006543 6.4e-125 451.4 364 65.9
Ciclev10015542m.g Citrus clementina HOM05D005473 ORTHO05D006543 1.1e-124 450.7 362 66.3
SalBow8G1667 Salvia bowleyana HOM05D005473 ORTHO05D006543 3.5e-123 445.7 365 66.8
vmacro01424 Vaccinium macrocarpon HOM05D005473 ORTHO05D006543 6.0e-123 444.9 370 65.7
FAN17G2750 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.5e-121 439.5 365 64.7
Lj5g0028089 Lotus japonicus HOM05D005473 ORTHO05D006543 2.5e-121 439.5 365 63.8
FvH4_4g26380 Fragaria vesca HOM05D005473 ORTHO05D006543 5.6e-121 438.3 365 64.7
Manes.14G109600 Manihot esculenta HOM05D005473 ORTHO05D006543 5.6e-121 438.3 363 64.2
Thecc.02G215500 Theobroma cacao HOM05D005473 ORTHO05D006543 5.6e-121 438.3 367 64.0
FAN12G0751 Fragaria x ananassa HOM05D005473 ORTHO05D006543 7.3e-121 438.0 365 64.4
FAN12G1468 Fragaria x ananassa HOM05D005473 ORTHO05D006543 7.3e-121 438.0 365 64.4
Dinv16166 Davidia involucrata HOM05D005473 ORTHO05D006543 9.6e-121 437.6 365 65.8
FAN22G1873 Fragaria x ananassa HOM05D005473 ORTHO05D006543 9.6e-121 437.6 353 66.3
Cc11_g09260 Coffea canephora HOM05D005473 ORTHO05D006543 1.6e-120 436.8 365 66.6
CAN.G1489.13 Capsicum annuum HOM05D005473 ORTHO05D006543 2.1e-120 436.4 363 66.1
Potri.008G126400 Populus trichocarpa HOM05D005473 ORTHO05D006543 2.1e-120 436.4 362 63.0
RcHm_v2.0_Chr4g0434011 Rosa chinensis HOM05D005473 ORTHO05D006543 2.8e-120 436.0 360 65.0
Solyc05g008520.3 Solanum lycopersicum HOM05D005473 ORTHO05D006543 1.1e-119 434.1 362 65.5
PGSC0003DMG400030516 Solanum tuberosum HOM05D005473 ORTHO05D006543 1.8e-119 433.3 362 65.2
VMungo0720G0454 Vigna mungo HOM05D005473 ORTHO05D006543 1.8e-119 433.3 363 63.4
ClCG05G022330 Citrullus lanatus HOM05D005473 ORTHO05D006543 4.0e-119 432.2 367 64.9
Gohir.D05G319500 Gossypium hirsutum HOM05D005473 ORTHO05D006543 4.0e-119 432.2 366 62.3
Sed0015008 Sechium edule HOM05D005473 ORTHO05D006543 4.0e-119 432.2 363 63.9
Sopen05g004360 Solanum pennellii HOM05D005473 ORTHO05D006543 6.9e-119 431.4 362 65.5
Atru.chr11.335 Acer truncatum HOM05D005473 ORTHO05D006543 1.2e-118 430.6 361 62.9
CsaV3_5G034770 Cucumis sativus L. HOM05D005473 ORTHO05D006543 1.2e-118 430.6 367 64.3
Gorai.009G342800 Gossypium raimondii HOM05D005473 ORTHO05D006543 2.6e-118 429.5 367 62.4
Glyma.20G123200 Glycine max HOM05D005473 ORTHO05D006543 3.4e-118 429.1 366 63.9
Lj3A877T94 Lonicera japonica HOM05D005473 ORTHO05D006543 1.3e-117 427.2 409 60.1
Lalb_Chr06g0165731 Lupinus albus HOM05D005473 ORTHO05D006543 1.3e-117 427.2 365 63.3
FAN07G2597 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.2e-117 426.4 353 64.9
Sabra08G0095200 Salix brachista HOM05D005473 ORTHO05D006543 2.2e-117 426.4 363 61.7
COL.COLO4_20121 Corchorus olitorius HOM05D005473 ORTHO05D006543 2.9e-117 426.0 365 61.1
Sabra16G0274100 Salix brachista HOM05D005473 ORTHO05D006543 3.8e-117 425.6 363 61.4
Phvul.007G034400 Phaseolus vulgaris HOM05D005473 ORTHO05D006543 6.4e-117 424.9 368 62.5
Oeu059511.2 Olea europaea HOM05D005473 ORTHO05D006543 4.2e-116 422.2 343 65.9
Rhsim12G0088500 Rhododendron simsii HOM05D005473 ORTHO05D006543 2.1e-115 419.9 428 56.5
Ca_30210_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 6.0e-115 418.3 365 62.2
TPR.G4908 Trifolium pratense HOM05D005473 ORTHO05D006543 7.9e-115 417.9 363 62.0
Migut.L01020 Erythranthe guttata HOM05D005473 ORTHO05D006543 1.7e-114 416.8 368 64.1
Peaxi162Scf00205g01024 Petunia axillaris HOM05D000048 ORTHO05D006543 3.0e-114 416.0 335 67.5
Eucgr.K00649 Eucalyptus grandis HOM05D005473 ORTHO05D006543 1.5e-113 413.7 362 60.8
Medtr1g109070 Medicago truncatula HOM05D005473 ORTHO05D006543 1.9e-113 413.3 365 61.4
Psat6g222680 Pisum sativum HOM05D005473 ORTHO05D006543 1.9e-113 413.3 363 62.0
Actinidia31990 Actinidia chinensis HOM05D005473 ORTHO05D006543 3.3e-113 412.5 320 70.0
Gohir.A05G317600 Gossypium hirsutum HOM05D005473 ORTHO05D006543 1.3e-112 410.6 366 59.8
Sc11g0003970 Simmondsia chinensis HOM05D005473 ORTHO05D006543 1.1e-111 407.5 343 63.0
PGR119G2355 Punica granatum HOM05D005473 ORTHO05D006543 4.0e-111 405.6 363 59.0
Cpa.g.sc65.93 Carica papaya HOM05D005473 ORTHO05D006543 2.0e-110 403.3 362 61.9
Atru.chr11.342 Acer truncatum HOM05D005473 ORTHO05D006543 3.4e-110 402.5 341 62.8
Lsat_1_v5_gn_3_54040 Lactuca sativa HOM05D005473 ORTHO05D006543 4.5e-110 402.1 363 59.0
AUR62037258 Chenopodium quinoa HOM05D005473 ORTHO05D006543 3.8e-109 399.1 372 57.5
ECA246G4292 Erigeron canadensis HOM05D005473 ORTHO05D006543 1.9e-108 396.7 378 58.5
AUR62002772 Chenopodium quinoa HOM05D005473 ORTHO05D006543 4.2e-108 395.6 372 56.5
CANSAT01G2653 Cannabis sativa HOM05D005473 ORTHO05D006543 9.3e-108 394.4 366 58.5
HanXRQChr15g0477691 Helianthus annuus HOM05D005473 ORTHO05D006543 1.2e-107 394.0 368 58.7
Aa31LG7G6980 Aethionema arabicum HOM05D005473 ORTHO05D006543 5.6e-105 385.2 367 55.3
SGA_v2.0_scaffold50G18546 Striga asiatica HOM05D005473 ORTHO05D006543 9.6e-105 384.4 362 59.4
Nitab4.5_0013146g0010 Nicotiana tabacum HOM05D005473 ORTHO05D006543 2.8e-104 382.9 304 68.8
MBI16_g29822_MAGBIO Magnolia biondii HOM05D005473 ORTHO05D006543 1.8e-103 380.2 370 58.4
Carub.0001s2247 Capsella rubella HOM05D005473 ORTHO05D006543 2.0e-102 376.7 363 55.9
DCAR_023622 Daucus carota HOM05D005473 ORTHO05D006543 5.8e-102 375.2 305 67.2
AL1G36530 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 1.3e-101 374.0 363 55.4
AT1G22970 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 2.2e-101 373.2 366 55.7
A09p41740 Brassica napus HOM05D005473 ORTHO05D006543 3.8e-101 372.5 366 56.0
CARHR023350 Cardamine hirsuta HOM05D005473 ORTHO05D006543 6.5e-101 371.7 363 55.9
BraA09t39663Z Brassica rapa HOM05D005473 ORTHO05D006543 1.1e-100 370.9 366 54.6
EL10Ac6g14276 Beta vulgaris HOM05D005473 ORTHO05D006543 1.4e-100 370.5 393 53.7
Aqoxy5G03875 Aquilegia oxysepala HOM05D005473 ORTHO05D006543 1.6e-99 367.1 361 56.2
Thhalv10008033m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 4.6e-99 365.5 366 55.2
Ah.03g138500 Amaranthus hybridus HOM05D005473 ORTHO05D006543 6.0e-99 365.2 369 52.8
PSO017G4790 Papaver somniferum HOM05D005473 ORTHO05D006543 6.0e-99 365.2 369 56.4
AL2G30760 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 1.0e-98 364.4 362 55.2
C05p22180 Brassica napus HOM05D005473 ORTHO05D006543 1.9e-97 360.1 369 53.9
BcaB07g32295 Brassica carinata HOM05D005473 ORTHO05D006543 4.8e-96 355.5 368 54.6
Ca_23703_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 1.1e-95 354.4 365 55.1
BraA07t31315Z Brassica rapa HOM05D005473 ORTHO05D006543 4.1e-95 352.4 364 51.9
MELO3C012289.2 Cucumis melo HOM05D005473 ORTHO05D006543 1.5e-94 350.5 309 63.4
PSO478G0709 Papaver somniferum HOM05D005473 ORTHO05D006543 7.6e-94 348.2 369 55.8
PSO782G5692 Papaver somniferum HOM05D005473 ORTHO05D006543 1.0e-93 347.8 367 54.2
BolC5t30918H Brassica oleracea HOM05D005473 ORTHO05D006543 1.3e-93 347.4 369 52.0
BcaC05g26209 Brassica carinata HOM05D005473 ORTHO05D006543 2.2e-93 346.7 369 52.0
Potri.010G117100 Populus trichocarpa HOM05D005473 ORTHO05D006543 2.2e-93 346.7 306 61.8
Sp5g26320 Schrenkiella parvula HOM05D005473 ORTHO05D006543 4.2e-92 342.4 368 51.1
AT1G71150 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 1.8e-90 337.0 365 52.1
Sp1g20430 Schrenkiella parvula HOM05D005473 ORTHO05D006543 8.7e-90 334.7 366 51.9
Duzib268G1740 Durio zibethinus HOM05D005473 ORTHO05D006543 4.8e-88 328.9 286 63.3
Carub.0002s1804 Capsella rubella HOM05D005473 ORTHO05D006543 8.2e-88 328.2 364 50.3
THA.LOC104812031 Tarenaya hassleriana HOM05D005473 ORTHO05D006543 4.1e-87 325.9 304 58.2
CARHR064450 Cardamine hirsuta HOM05D005473 ORTHO05D006543 2.2e-85 320.1 365 49.0
TWI79G1332 Tripterygium wilfordii HOM05D005473 ORTHO05D006543 1.9e-84 317.0 348 51.4
BcaB03g14874 Brassica carinata HOM05D005473 ORTHO05D006543 6.1e-83 312.0 320 53.8
CDE07G0910 Ceratophyllum demersum HOM05D005473 ORTHO05D006543 1.8e-82 310.5 367 47.7
BcaC08g46554 Brassica carinata HOM05D005473 ORTHO05D006543 1.5e-81 307.4 356 48.0
BolC6t39580H Brassica oleracea HOM05D005473 ORTHO05D006543 2.8e-80 303.1 351 48.1
HPP92_020137 Vanilla planifolia HOM05D005473 ORTHO05D006543 4.1e-79 299.3 362 48.1
ATR0691G101 Amborella trichopoda HOM05D005473 ORTHO05D006543 4.5e-78 295.8 367 47.4
Os05g0554500 Oryza sativa ssp. japonica HOM05D005473 ORTHO05D006543 6.5e-77 292.0 359 44.3
unitig_749.g14005 Utricularia gibba HOM05D005473 ORTHO05D006543 3.2e-76 289.7 299 57.2
Zm00001eb295130 Zea mays HOM05D005473 ORTHO05D006543 2.6e-73 280.0 377 43.0
Glyma.10G267900 Glycine max HOM05D005473 ORTHO05D006543 1.3e-72 277.7 246 61.8
Thecc.02G215400 Theobroma cacao HOM05D005473 ORTHO05D006543 2.6e-70 270.0 238 61.8
Actinidia33629 Actinidia chinensis HOM05D005473 ORTHO05D006543 1.0e-69 268.1 248 62.5
Thhalv10018995m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 1.7e-69 267.3 274 55.8
AT1G22980 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 1.9e-68 263.8 341 44.3
A07p37530 Brassica napus HOM05D000048 ORTHO05D006543 1.9e-68 263.8 362 41.7
AL1G36540 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 9.4e-68 261.5 340 45.9
Migut.O00950 Erythranthe guttata HOM05D005473 ORTHO05D006543 2.4e-63 246.9 238 60.1
HanXRQChr15g0477701 Helianthus annuus HOM05D005473 ORTHO05D006543 1.0e-61 241.5 352 43.8
A01p19890 Brassica napus HOM05D005473 ORTHO05D006543 2.1e-59 233.8 239 54.8
SEGI_09717 Sequoiadendron giganteum HOM05D005473 ORTHO05D006543 1.0e-58 231.5 357 38.9
Rhsim03G0134600 Rhododendron simsii HOM05D005473 ORTHO05D006543 2.0e-54 217.2 239 55.6
Duzib251G0055 Durio zibethinus HOM05D005473 ORTHO05D006543 1.0e-53 214.9 274 49.3
PSO384G2466 Papaver somniferum HOM05D005473 ORTHO05D006543 4.4e-49 199.5 298 43.0
SMO202G0044 Selaginella moellendorffii HOM05D005473 ORTHO05D006543 3.5e-46 189.9 317 38.8
AagrBONN_evm.TU.Sc2ySwM_344.5342 Anthoceros agrestis HOM05D005473 ORTHO05D006543 4.1e-39 166.4 342 34.2
Pp3c15_5840 Physcomitrium patens HOM05D005473 ORTHO05D006543 3.5e-38 163.3 461 28.0
Hund25017 Selenicereus undatus HOM05D005473 ORTHO05D006543 6.8e-34 149.1 128 60.2
C06p45250 Brassica napus HOM05D005473 ORTHO05D006543 9.8e-33 145.2 191 44.0
C06p45240 Brassica napus HOM05D000048 ORTHO05D000207 1.9e-31 141.0 125 55.2
PSO339G4228 Papaver somniferum HOM05D005473 ORTHO05D006543 1.2e-30 138.3 373 30.8
Oeu036129.1 Olea europaea HOM05D005473 ORTHO05D006543 1.6e-30 137.9 154 58.4
CBR_g3993 Chara braunii HOM05D005493 ORTHO05D007154 1.7e-21 107.8 163 37.4
MD13G1032300 Malus domestica HOM05D005473 ORTHO05D006543 5.4e-15 86.3 56 73.2
MSTRG.15906 Avicennia marina HOM05D005473 ORTHO05D006543 6.6e-13 79.3 55 69.1
MD16G1034500 Malus domestica HOM05D005473 ORTHO05D006543 6.6e-13 79.3 56 67.9
CAN.G572.16 Capsicum annuum HOM05D005473 ORTHO05D006543 8.6e-13 79.0 151 37.7
AagrBONN_evm.TU.Sc2ySwM_117.2697 Anthoceros agrestis HOM05D005473 ORTHO05D006543 2.1e-11 74.3 176 33.5
MCO05G366 Micromonas commoda HOM05D005473 ORTHO05D006543 7.1e-07 59.3 296 23.3


User provided reference genes

Program Settings