Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01011763001 Vitis vinifera HOM05D005313 ORTHO05D006317 3.5e-172 608.2 315 100.0
TAR623G0220 Trochodendron aralioides HOM05D005313 ORTHO05D006317 3.0e-155 552.0 315 87.0
COL.COLO4_20475 Corchorus olitorius HOM05D005313 ORTHO05D006317 5.7e-154 547.7 315 88.6
Potri.008G128900 Populus trichocarpa HOM05D005313 ORTHO05D006317 1.3e-153 546.6 315 87.3
TWI31G1405 Tripterygium wilfordii HOM05D005313 ORTHO05D006317 2.2e-153 545.8 315 87.3
Thecc.02G280500 Theobroma cacao HOM05D005313 ORTHO05D006317 1.1e-152 543.5 315 87.9
Lj6A747T68 Lonicera japonica HOM05D005313 ORTHO05D006317 1.4e-152 543.1 315 87.9
PSO384G2037 Papaver somniferum HOM05D005313 ORTHO05D006317 1.4e-152 543.1 315 87.0
Atru.chr9.122 Acer truncatum HOM05D005313 ORTHO05D006317 2.4e-152 542.3 315 86.3
Gorai.002G179900 Gossypium raimondii HOM05D005313 ORTHO05D006317 2.0e-151 539.3 315 87.0
Eucgr.G02191 Eucalyptus grandis HOM05D005313 ORTHO05D006317 3.4e-151 538.5 315 86.0
Cfa008602 Carpinus fangiana HOM05D005313 ORTHO05D006317 5.9e-151 537.7 315 87.0
Gohir.A01G152800 Gossypium hirsutum HOM05D005313 ORTHO05D006317 5.9e-151 537.7 315 87.0
Manes.17G006600 Manihot esculenta HOM05D005313 ORTHO05D006317 7.7e-151 537.3 315 86.3
Lalb_Chr17g0338641 Lupinus albus HOM05D005313 ORTHO05D006317 1.3e-150 536.6 313 84.7
CSS0048776 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 1.7e-150 536.2 315 86.0
Psat6g042560 Pisum sativum HOM05D005313 ORTHO05D006317 3.8e-150 535.0 313 85.6
Rhsim02G0199800 Rhododendron simsii HOM05D005313 ORTHO05D006317 3.8e-150 535.0 313 86.9
Medtr1g030750 Medicago truncatula HOM05D005313 ORTHO05D006317 5.0e-150 534.6 313 85.6
QL01p001863 Quercus lobata HOM05D005313 ORTHO05D006317 5.0e-150 534.6 314 86.9
Gohir.D01G145600 Gossypium hirsutum HOM05D005313 ORTHO05D006317 8.5e-150 533.9 315 86.0
PSO339G3364 Papaver somniferum HOM05D005313 ORTHO05D006317 8.5e-150 533.9 315 86.0
CANSAT01G3269 Cannabis sativa HOM05D005313 ORTHO05D006317 1.1e-149 533.5 315 85.7
MSTRG.895 Avicennia marina HOM05D005313 ORTHO05D006317 3.2e-149 531.9 315 85.7
PGR119G0894 Punica granatum HOM05D005313 ORTHO05D006317 4.2e-149 531.6 315 84.8
Cc11_g08770 Coffea canephora HOM05D005313 ORTHO05D006317 5.5e-149 531.2 313 85.3
FvH4_4g32330 Fragaria vesca HOM05D005313 ORTHO05D006317 1.2e-148 530.0 313 85.9
AT2G01350 Arabidopsis thaliana HOM05D005313 ORTHO05D006317 1.6e-148 529.6 315 85.4
CARHR143870 Cardamine hirsuta HOM05D005313 ORTHO05D006317 1.6e-148 529.6 315 84.8
Thhalv10000908m.g Eutrema salsugineum HOM05D005313 ORTHO05D006317 1.6e-148 529.6 315 84.8
RcHm_v2.0_Chr4g0441121 Rosa chinensis HOM05D005313 ORTHO05D006317 1.6e-148 529.6 313 85.9
AL5G10310 Arabidopsis lyrata HOM05D005313 ORTHO05D006317 2.1e-148 529.3 315 84.8
BcaB07g30404 Brassica carinata HOM05D005313 ORTHO05D006317 2.1e-148 529.3 315 84.8
Lj2g0003652 Lotus japonicus HOM05D005313 ORTHO05D006317 2.1e-148 529.3 313 84.7
MD16G1029000 Malus domestica HOM05D005313 ORTHO05D006317 2.1e-148 529.3 313 86.9
Glyma.02G238100 Glycine max HOM05D005313 ORTHO05D006317 2.7e-148 528.9 313 84.3
Carub.0005s0033 Capsella rubella HOM05D005313 ORTHO05D006317 3.6e-148 528.5 315 85.1
SalBow4G0219 Salvia bowleyana HOM05D005313 ORTHO05D006317 3.6e-148 528.5 315 85.7
vmacro10642 Vaccinium macrocarpon HOM05D005313 ORTHO05D006317 3.6e-148 528.5 313 86.3
Prupe.1G323900 Prunus persica HOM05D005313 ORTHO05D006317 7.9e-148 527.3 313 85.9
Phvul.003G023500 Phaseolus vulgaris HOM05D005313 ORTHO05D006317 1.0e-147 526.9 313 84.3
Sp2g12800 Schrenkiella parvula HOM05D005313 ORTHO05D006317 1.0e-147 526.9 315 84.4
Glyma.09G118600 Glycine max HOM05D005313 ORTHO05D006317 2.3e-147 525.8 313 83.7
HanXRQChr15g0488661 Helianthus annuus HOM05D005313 ORTHO05D006317 3.0e-147 525.4 315 85.1
THA.LOC104805057 Tarenaya hassleriana HOM05D005313 ORTHO05D006317 3.9e-147 525.0 315 83.8
FAN17G2517 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.5e-146 523.1 320 84.1
C02p49400 Brassica napus HOM05D005313 ORTHO05D006317 2.0e-146 522.7 315 84.1
VMungo1215G0481 Vigna mungo HOM05D005313 ORTHO05D006317 2.0e-146 522.7 315 82.5
A02p31910 Brassica napus HOM05D005313 ORTHO05D006317 2.6e-146 522.3 315 84.1
BraA02t08201Z Brassica rapa HOM05D005313 ORTHO05D006317 2.6e-146 522.3 315 84.1
Peaxi162Scf00450g00614 Petunia axillaris HOM05D005313 ORTHO05D006317 3.3e-146 521.9 315 85.1
Oeu024584.1 Olea europaea HOM05D005313 ORTHO05D006317 4.4e-146 521.5 333 80.8
BolC2t11026H Brassica oleracea HOM05D005313 ORTHO05D006317 9.7e-146 520.4 315 83.8
Sc14g0007170 Simmondsia chinensis HOM05D005313 ORTHO05D006317 9.7e-146 520.4 315 82.9
Peaxi162Scf00159g00112 Petunia axillaris HOM05D005313 ORTHO05D006317 1.7e-145 519.6 315 84.8
Nitab4.5_0000742g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 2.2e-145 519.2 313 84.3
BcaC03g17029 Brassica carinata HOM05D005313 ORTHO05D006317 2.8e-145 518.8 315 83.5
ECA246G2448 Erigeron canadensis HOM05D005313 ORTHO05D006317 2.8e-145 518.8 315 84.1
Solyc05g008180.3 Solanum lycopersicum HOM05D005313 ORTHO05D006317 2.8e-145 518.8 315 83.8
AUR62017725 Chenopodium quinoa HOM05D005313 ORTHO05D006317 3.7e-145 518.5 311 84.2
Sopen05g004020 Solanum pennellii HOM05D005313 ORTHO05D006317 3.7e-145 518.5 315 83.8
PGSC0003DMG400030501 Solanum tuberosum HOM05D005313 ORTHO05D006317 3.7e-145 518.5 315 84.1
FAN22G0311 Fragaria x ananassa HOM05D005313 ORTHO05D006317 6.3e-145 517.7 320 83.1
Aa31LG2G8560 Aethionema arabicum HOM05D005313 ORTHO05D006317 8.2e-145 517.3 325 80.9
Aqoxy1G00025 Aquilegia oxysepala HOM05D005313 ORTHO05D006317 6.9e-144 514.2 313 83.4
CDE05G1915 Ceratophyllum demersum HOM05D005313 ORTHO05D006317 9.1e-144 513.8 315 81.9
Hund08629 Selenicereus undatus HOM05D005313 ORTHO05D006317 9.1e-144 513.8 311 84.2
Ca_25713_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 2.0e-143 512.7 347 76.7
Sabra08G0097700 Salix brachista HOM05D005313 ORTHO05D006317 3.4e-143 511.9 376 72.6
FAN07G2253 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.0e-142 510.4 338 78.7
EL10Ac7g15995 Beta vulgaris HOM05D005313 ORTHO05D006317 1.7e-142 509.6 311 83.6
Lsat_1_v5_gn_3_54641 Lactuca sativa HOM05D005313 ORTHO05D006317 8.5e-142 507.3 314 82.2
CsaV3_5G013570 Cucumis sativus L. HOM05D005313 ORTHO05D006317 1.4e-141 506.5 313 82.1
MELO3C018332.2 Cucumis melo HOM05D005313 ORTHO05D006317 2.5e-141 505.8 315 81.3
Sed0021241 Sechium edule HOM05D005313 ORTHO05D006317 5.5e-141 504.6 315 81.3
Dinv17424 Davidia involucrata HOM05D005313 ORTHO05D006317 7.2e-141 504.2 282 90.1
Os09g0553600 Oryza sativa ssp. japonica HOM05D005313 ORTHO05D006317 1.4e-139 500.0 313 78.3
AUR62032955 Chenopodium quinoa HOM05D005313 ORTHO05D006317 7.4e-138 494.2 353 74.2
Zm00001eb104420 Zea mays HOM05D005313 ORTHO05D006317 3.7e-137 491.9 313 76.7
HPP92_025383 Vanilla planifolia HOM05D005313 ORTHO05D006317 2.0e-135 486.1 315 76.2
Duzib248G1582 Durio zibethinus HOM05D005313 ORTHO05D006317 1.7e-134 483.0 315 80.0
Haze_11011 Corylus avellana HOM05D005313 ORTHO05D006317 5.0e-134 481.5 282 85.5
CAN.G1334.2 Capsicum annuum HOM05D005313 ORTHO05D006317 9.4e-133 477.2 287 85.7
Ah.01g012630 Amaranthus hybridus HOM05D005313 ORTHO05D006317 1.8e-131 473.0 307 79.5
SalBow4G0808 Salvia bowleyana HOM05D005313 ORTHO05D006317 8.8e-131 470.7 282 84.4
SGA_v2.0_scaffold50G18517 Striga asiatica HOM05D005313 ORTHO05D006317 2.6e-130 469.2 315 78.1
BcaC03g17031 Brassica carinata HOM05D005313 ORTHO05D006317 2.8e-129 465.7 315 78.1
Pp3c8_18030 Physcomitrium patens HOM05D005313 ORTHO05D006317 1.7e-126 456.4 313 72.5
Cpa.g.sc65.129 Carica papaya HOM05D005313 ORTHO05D006317 2.9e-126 455.7 315 76.5
FAN12G1743 Fragaria x ananassa HOM05D005313 ORTHO05D006317 3.2e-125 452.2 367 67.8
Ciclev10018157m.g Citrus clementina HOM05D005313 ORTHO05D006317 4.2e-125 451.8 267 84.3
unitig_0.g2330 Utricularia gibba HOM05D005313 ORTHO05D006317 3.6e-124 448.7 323 72.4
Duzib248G1474 Durio zibethinus HOM05D005313 ORTHO05D006317 4.0e-123 445.3 262 85.1
CiPaw.06G012200 Carya illinoinensis HOM05D005313 ORTHO05D006317 1.3e-121 440.3 275 80.7
Migut.L00987 Erythranthe guttata HOM05D005313 ORTHO05D006317 5.9e-119 431.4 260 83.1
Nn2g15695 Nelumbo nucifera HOM05D005313 ORTHO05D006317 1.0e-118 430.6 315 73.7
SMO164G0169 Selaginella moellendorffii HOM05D005313 ORTHO05D006317 2.1e-116 422.9 313 68.1
arahy.Tifrunner.gnm1.ann1.Y1EHRK Arachis hypogaea HOM05D005313 ORTHO05D006317 2.4e-112 409.5 313 69.3
Mapoly0011s0070 Marchantia polymorpha HOM05D005313 ORTHO05D006317 9.2e-112 407.5 298 67.8
Nitab4.5_0004816g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 2.0e-111 406.4 242 86.4
arahy.Tifrunner.gnm1.ann1.G5QWBZ Arachis hypogaea HOM05D005313 ORTHO05D006317 1.0e-110 404.1 322 67.7
CBR_g30917 Chara braunii HOM05D005313 ORTHO05D006317 5.0e-110 401.7 314 67.5
SEGI_23840 Sequoiadendron giganteum HOM05D005313 ORTHO05D006317 4.1e-104 382.1 255 73.7
DCAR_023608 Daucus carota HOM05D005313 ORTHO05D006317 3.1e-99 365.9 221 84.6
Ca_12605_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 3.9e-94 349.0 200 85.5
MCO15G382 Micromonas commoda HOM05D005313 ORTHO05D006317 4.4e-90 335.5 303 57.1
AagrBONN_evm.TU.Sc2ySwM_117.3802 Anthoceros agrestis HOM05D005313 ORTHO05D006317 2.4e-83 313.2 230 67.8
ATR0807G196 Amborella trichopoda HOM05D005313 ORTHO05D006317 2.0e-82 310.1 192 82.3
PRCOL_00006420 Prasinoderma coloniale HOM05D005313 ORTHO05D006317 2.0e-82 310.1 302 54.3
Cre02.g141200 Chlamydomonas reinhardtii HOM05D005313 ORTHO05D006317 1.1e-80 304.3 308 54.2
ClCG07G006260 Citrullus lanatus HOM05D005313 ORTHO05D006317 2.1e-79 300.1 187 80.7
Zm00001eb320780 Zea mays HOM05D005313 ORTHO05D006317 2.8e-76 289.7 220 67.3
Dinv05167 Davidia involucrata HOM05D005313 ORTHO05D006317 2.1e-71 273.5 167 85.6
Potri.010G113500 Populus trichocarpa HOM05D005313 ORTHO05D006317 3.1e-67 259.6 192 67.2
Migut.L00982 Erythranthe guttata HOM05D005313 ORTHO05D006317 1.6e-63 247.3 315 49.2
Actinidia26811 Actinidia chinensis HOM05D005313 ORTHO05D006317 1.8e-59 233.8 151 77.5
CsaV3_UNG236450 Cucumis sativus L. HOM05D005313 ORTHO05D006317 2.2e-57 226.9 275 49.5
SHI04677 Sapria himalayana HOM05D005313 ORTHO05D006317 1.1e-53 214.5 160 69.4
A06p44480 Brassica napus HOM05D005313 ORTHO05D006317 3.2e-48 196.4 242 52.1
SHI04675 Sapria himalayana HOM05D005313 ORTHO05D006317 1.0e-46 191.4 122 75.4
AagrBONN_evm.TU.Sc2ySwM_368.1836 Anthoceros agrestis HOM05D005313 ORTHO05D006317 2.5e-40 170.2 122 66.4
Ca_31307_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 1.5e-37 161.0 280 34.3
RcHm_v2.0_Chr2g0157601 Rosa chinensis HOM05D005313 ORTHO05D006317 5.7e-37 159.1 95 81.1
Sabra10G0083500 Salix brachista HOM05D005313 ORTHO05D006317 1.7e-36 157.5 266 39.8
ClCG07G006250 Citrullus lanatus HOM05D005313 ORTHO05D006317 1.4e-35 154.5 95 76.8
Actinidia14964 Actinidia chinensis HOM05D005313 ORTHO05D006317 9.1e-35 151.8 260 39.6
Oeu045874.1 Olea europaea HOM05D005313 ORTHO05D006317 1.1e-32 144.8 140 61.4
COL.COLO4_10085 Corchorus olitorius HOM05D005313 ORTHO05D006317 1.6e-31 141.0 85 78.8
TPR.G36891 Trifolium pratense HOM05D005313 ORTHO05D006317 1.3e-28 131.3 101 71.3
Glyma.07G165500 Glycine max HOM05D005313 ORTHO05D006317 7.7e-26 122.1 81 75.3
CSS0042289 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 8.8e-22 108.6 108 56.5
CAN.G1020.2 Capsicum annuum HOM05D005313 ORTHO05D006317 2.4e-19 100.5 113 49.6
COL.COLO4_10084 Corchorus olitorius HOM05D005313 ORTHO05D006317 1.2e-18 98.2 54 85.2
MBI06_g07791_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.5e-18 96.7 59 86.4
Aa31LG11G8270 Aethionema arabicum HOM05D005313 ORTHO05D006317 4.5e-18 96.3 88 63.6
TPR.G36912 Trifolium pratense HOM05D005313 ORTHO05D006317 6.5e-17 92.4 52 78.8
CsaV3_UNG236470 Cucumis sativus L. HOM05D005313 ORTHO05D006317 8.5e-17 92.0 67 73.1
Aa31LG11G8280 Aethionema arabicum HOM05D005313 ORTHO05D006317 4.2e-16 89.7 62 69.4
BcaC06g31315 Brassica carinata HOM05D005313 ORTHO05D006317 6.7e-14 82.4 55 70.9
Actinidia01955 Actinidia chinensis HOM05D005313 ORTHO05D006317 3.7e-12 76.6 43 81.4
AagrBONN_evm.TU.Sc2ySwM_117.3801 Anthoceros agrestis HOM05D005313 ORTHO05D006317 2.5e-08 63.9 36 77.8
Oeu045873.1 Olea europaea HOM05D005313 ORTHO05D006317 6.8e-06 55.8 34 76.5


User provided reference genes

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