Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01011600001 Vitis vinifera HOM05D005922 ORTHO05D006934 9.8e-222 773.1 371 100.0
TAR622G0311 Trochodendron aralioides HOM05D005922 ORTHO05D006934 5.5e-148 528.1 398 66.8
Actinidia20108 Actinidia chinensis HOM05D005922 ORTHO05D006934 2.1e-147 526.2 398 66.1
QL03p038994 Quercus lobata HOM05D005922 ORTHO05D006934 6.1e-147 524.6 395 65.6
CSS0049283 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 1.8e-146 523.1 398 65.6
CiPaw.06G059000 Carya illinoinensis HOM05D005922 ORTHO05D006934 1.3e-144 516.9 398 65.8
Lj3A860T49 Lonicera japonica HOM05D005922 ORTHO05D006934 6.9e-143 511.1 393 64.9
MD16G1013700 Malus domestica HOM05D005922 ORTHO05D006934 7.7e-142 507.7 397 64.0
Ciclev10015473m.g Citrus clementina HOM05D005922 ORTHO05D006934 1.8e-138 496.5 400 62.5
Rhsim09G0086000 Rhododendron simsii HOM05D005922 ORTHO05D006934 3.9e-138 495.4 398 63.8
RcHm_v2.0_Chr4g0442081 Rosa chinensis HOM05D005922 ORTHO05D006934 6.7e-138 494.6 393 63.9
Manes.17G088400 Manihot esculenta HOM05D005922 ORTHO05D006934 2.0e-137 493.0 403 60.5
Dinv14365 Davidia involucrata HOM05D001297 ORTHO05D001135 4.3e-137 491.9 343 72.0
Nn4g24501 Nelumbo nucifera HOM05D005922 ORTHO05D006934 2.8e-136 489.2 398 62.3
Thhalv10018688m.g Eutrema salsugineum HOM05D005922 ORTHO05D006934 5.0e-133 478.4 392 62.5
BcaB03g15398 Brassica carinata HOM05D005922 ORTHO05D006934 2.5e-132 476.1 388 61.9
FAN12G4156 Fragaria x ananassa HOM05D005922 ORTHO05D006934 3.2e-132 475.7 395 61.0
Cc11_g05840 Coffea canephora HOM05D005922 ORTHO05D006934 4.2e-132 475.3 390 61.8
AL2G26830 Arabidopsis lyrata HOM05D005922 ORTHO05D006934 5.5e-132 474.9 395 60.8
FAN17G1819 Fragaria x ananassa HOM05D005922 ORTHO05D006934 5.5e-132 474.9 395 61.3
FvH4_4g33040 Fragaria vesca HOM05D005922 ORTHO05D006934 9.4e-132 474.2 395 61.0
Lj4g0028223 Lotus japonicus HOM05D005922 ORTHO05D006934 2.1e-131 473.0 394 60.2
Lalb_Chr13g0293631 Lupinus albus HOM05D005922 ORTHO05D006934 6.1e-131 471.5 391 59.8
MSTRG.418 Avicennia marina HOM05D005922 ORTHO05D006934 1.8e-130 469.9 391 60.4
FAN07G1633 Fragaria x ananassa HOM05D005922 ORTHO05D006934 2.3e-130 469.5 395 60.5
TWI74G0639 Tripterygium wilfordii HOM05D005922 ORTHO05D006934 2.3e-130 469.5 403 59.1
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea HOM05D005922 ORTHO05D006934 3.0e-130 469.2 395 59.2
Carub.0002s1456 Capsella rubella HOM05D005922 ORTHO05D006934 1.1e-129 467.2 392 59.7
Aqoxy3G04113 Aquilegia oxysepala HOM05D005922 ORTHO05D006934 3.3e-129 465.7 395 60.5
CSS0037760 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 3.3e-129 465.7 397 60.7
FAN22G1644 Fragaria x ananassa HOM05D005922 ORTHO05D006934 8.2e-128 461.1 402 60.2
Eucgr.B02658 Eucalyptus grandis HOM05D005922 ORTHO05D006934 1.4e-127 460.3 397 58.7
C06p37940 Brassica napus HOM05D005922 ORTHO05D006934 5.3e-127 458.4 390 59.7
Sc10g0003730 Simmondsia chinensis HOM05D005922 ORTHO05D006934 5.3e-127 458.4 375 60.3
BcaC08g45999 Brassica carinata HOM05D005922 ORTHO05D006934 1.2e-126 457.2 391 60.6
BolC6t38893H Brassica oleracea HOM05D005922 ORTHO05D006934 1.2e-126 457.2 391 60.6
Gorai.012G183700 Gossypium raimondii HOM05D005922 ORTHO05D006934 2.0e-126 456.4 394 58.6
PSO478G3575 Papaver somniferum HOM05D005922 ORTHO05D006934 4.5e-126 455.3 400 58.2
Prupe.1G337400 Prunus persica HOM05D005922 ORTHO05D006934 5.9e-126 454.9 393 59.8
BraA07t30847Z Brassica rapa HOM05D005922 ORTHO05D006934 7.7e-126 454.5 390 59.5
CAN.G282.103 Capsicum annuum HOM05D005922 ORTHO05D006934 1.7e-125 453.4 397 58.7
Potri.008G139000 Populus trichocarpa HOM05D005922 ORTHO05D006934 2.9e-125 452.6 385 60.3
PSO017G1338 Papaver somniferum HOM05D005922 ORTHO05D006934 8.5e-125 451.1 400 57.5
A07p32170 Brassica napus HOM05D005922 ORTHO05D006934 1.5e-124 450.3 390 58.7
Ca_11580_v3 Cicer arietinum L. HOM05D005922 ORTHO05D006934 1.5e-124 450.3 390 57.2
Phvul.002G181600 Phaseolus vulgaris HOM05D005922 ORTHO05D006934 1.5e-124 450.3 396 56.3
TPR.G5128 Trifolium pratense HOM05D005922 ORTHO05D006934 1.5e-124 450.3 389 58.4
Psat7g084400 Pisum sativum HOM05D005922 ORTHO05D006934 5.5e-124 448.4 395 57.7
HanXRQChr17g0566161 Helianthus annuus HOM05D005922 ORTHO05D006934 1.6e-123 446.8 395 58.0
Sed0026869 Sechium edule HOM05D005922 ORTHO05D006934 2.1e-123 446.4 404 55.0
Solyc01g005100.4 Solanum lycopersicum HOM05D005922 ORTHO05D006934 2.1e-123 446.4 397 56.9
PGSC0003DMG400022790 Solanum tuberosum HOM05D005922 ORTHO05D006934 6.1e-123 444.9 401 56.6
Migut.L00620 Erythranthe guttata HOM05D005922 ORTHO05D006934 1.0e-122 444.1 391 56.8
Sopen01g001120 Solanum pennellii HOM05D005922 ORTHO05D006934 1.8e-122 443.4 397 56.9
AUR62007770 Chenopodium quinoa HOM05D005922 ORTHO05D006934 8.8e-122 441.0 395 55.4
EL10Ac6g14554 Beta vulgaris HOM05D005922 ORTHO05D006934 1.5e-121 440.3 394 55.6
Hund05787 Selenicereus undatus HOM05D005922 ORTHO05D006934 1.5e-121 440.3 429 51.5
ECA234G0994 Erigeron canadensis HOM05D005922 ORTHO05D006934 5.7e-121 438.3 377 59.7
AUR62002964 Chenopodium quinoa HOM05D005922 ORTHO05D006934 1.3e-120 437.2 393 54.5
Duzib248G0719 Durio zibethinus HOM05D005922 ORTHO05D006934 6.3e-120 434.9 397 57.4
MELO3C020028.2 Cucumis melo HOM05D005922 ORTHO05D006934 1.8e-119 433.3 393 56.7
Glyma.08G093700 Glycine max HOM05D005922 ORTHO05D006934 1.2e-118 430.6 391 56.5
Sp5g23080 Schrenkiella parvula HOM05D005922 ORTHO05D006934 1.3e-117 427.2 339 64.0
CsaV3_5G013220 Cucumis sativus L. HOM05D005922 ORTHO05D006934 2.2e-117 426.4 392 55.9
Lsat_1_v5_gn_4_23861 Lactuca sativa HOM05D005922 ORTHO05D006934 1.9e-116 423.3 385 57.9
MBI19_g25220_MAGBIO Magnolia biondii HOM05D005922 ORTHO05D006934 1.9e-116 423.3 399 55.4
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 3.2e-116 422.5 373 59.8
THA.LOC104809799 Tarenaya hassleriana HOM05D005922 ORTHO05D006934 5.5e-116 421.8 383 57.2
Sabra08G0105600 Salix brachista HOM05D005922 ORTHO05D006934 3.6e-115 419.1 409 54.8
ClCG11G001170 Citrullus lanatus HOM05D005922 ORTHO05D006934 7.5e-113 411.4 400 54.2
PGR102G1589 Punica granatum HOM05D005922 ORTHO05D006934 7.5e-113 411.4 409 52.1
Gohir.D04G188200 Gossypium hirsutum HOM05D005922 ORTHO05D006934 1.1e-108 397.5 325 60.9
SGA_v2.0_scaffold57G20105 Striga asiatica HOM05D005922 ORTHO05D006934 1.2e-107 394.0 397 54.2
Nitab4.5_0000521g0110 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.6e-107 393.7 446 48.4
unitig_748.g7591 Utricularia gibba HOM05D005922 ORTHO05D006934 3.0e-106 389.4 404 51.5
DCAR_026820 Daucus carota HOM05D005922 ORTHO05D006934 2.0e-105 386.7 376 54.8
Gohir.A04G143900 Gossypium hirsutum HOM05D005922 ORTHO05D006934 1.7e-104 383.6 347 56.8
CANSAT78G1412 Cannabis sativa HOM05D005922 ORTHO05D006934 4.9e-104 382.1 403 50.4
ATR0598G299 Amborella trichopoda HOM05D005922 ORTHO05D006934 1.8e-103 380.2 392 50.8
SHI04278 Sapria himalayana HOM05D005922 ORTHO05D006934 2.0e-102 376.7 395 48.9
Nitab4.5_0001935g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 6.6e-101 371.7 411 50.6
Cfa015069 Carpinus fangiana HOM05D005922 ORTHO05D006934 2.6e-97 359.8 367 52.3
Atru.chr11.736 Acer truncatum HOM05D005922 ORTHO05D006934 1.8e-95 353.6 365 52.6
BcaC08g45997 Brassica carinata HOM05D005922 ORTHO05D006934 4.1e-95 352.4 314 57.6
CDE05G0039 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 4.6e-94 349.0 398 47.7
Cpa.g.sc2.132 Carica papaya HOM05D005922 ORTHO05D006934 6.6e-93 345.1 335 55.5
SalBow7G4797 Salvia bowleyana HOM05D005922 ORTHO05D006934 2.9e-88 329.7 413 48.2
AT1G68080 Arabidopsis thaliana HOM05D005922 ORTHO05D006934 1.2e-86 324.3 336 52.4
Haze_10819 Corylus avellana HOM05D005922 ORTHO05D006934 1.5e-84 317.4 234 67.9
Os03g0238700 Oryza sativa ssp. japonica HOM05D005922 ORTHO05D006934 1.2e-83 314.3 291 52.2
Ah.03g138110 Amaranthus hybridus HOM05D005922 ORTHO05D006934 2.8e-83 313.2 394 44.7
COL.COLO4_27589 Corchorus olitorius HOM05D005922 ORTHO05D006934 2.3e-82 310.1 330 52.1
Glyma.05G138500 Glycine max HOM05D005922 ORTHO05D006934 1.3e-80 304.3 288 55.2
arahy.Tifrunner.gnm1.ann1.F0VD4J Arachis hypogaea HOM05D005922 ORTHO05D006934 6.8e-74 282.0 396 42.7
Pp3c27_7680 Physcomitrium patens HOM05D005922 ORTHO05D006934 1.7e-72 277.3 183 66.1
AagrBONN_evm.TU.Sc2ySwM_117.2043 Anthoceros agrestis HOM05D005922 ORTHO05D006934 8.9e-66 255.0 187 63.1
CARHR060740 Cardamine hirsuta HOM05D005922 ORTHO05D006934 2.0e-65 253.8 278 50.0
Nitab4.5_0001294g0040 Nicotiana tabacum HOM05D005922 ORTHO05D006934 2.0e-65 253.8 181 64.1
Thecc.02G304700 Theobroma cacao HOM05D005922 ORTHO05D006934 5.1e-61 239.2 241 54.8
arahy.Tifrunner.gnm1.ann1.05ZMZX Arachis hypogaea HOM05D005922 ORTHO05D006934 9.9e-57 224.9 142 71.8
Peaxi162Scf01111g00310 Petunia axillaris HOM05D005922 ORTHO05D006934 9.9e-57 224.9 296 42.6
SEGI_26303 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 7.9e-54 215.3 127 74.8
Oeu034664.1 Olea europaea HOM05D005922 ORTHO05D006934 9.6e-52 208.4 112 83.0
Mapoly0075s0019 Marchantia polymorpha HOM05D005922 ORTHO05D006934 8.1e-51 205.3 262 45.0
Migut.O00731 Erythranthe guttata HOM05D005922 ORTHO05D006934 9.0e-50 201.8 251 44.2
arahy.Tifrunner.gnm1.ann1.GW2J4P Arachis hypogaea HOM05D006503 ORTHO05D008116 9.9e-49 198.4 248 45.2
Nitab4.5_0001294g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.3e-48 198.0 153 60.8
HPP92_016714 Vanilla planifolia HOM05D005922 ORTHO05D006934 2.9e-48 196.8 280 40.0
BcaB05g23450 Brassica carinata HOM05D005922 ORTHO05D006934 6.7e-45 185.7 112 74.1
CBR_g16882 Chara braunii HOM05D005922 ORTHO05D006934 1.9e-44 184.1 119 64.7
VMungo0251G2725 Vigna mungo HOM05D005922 ORTHO05D006934 3.7e-43 179.9 236 42.8
VMungo0251G3333 Vigna mungo HOM05D005922 ORTHO05D006934 3.7e-43 179.9 102 76.5
Cre12.g486551 Chlamydomonas reinhardtii HOM05D005922 ORTHO05D006934 1.0e-40 171.8 184 45.1
arahy.Tifrunner.gnm1.ann1.P482X0 Arachis hypogaea HOM05D005922 ORTHO05D006934 1.8e-37 161.0 93 78.5
Manes.18G025338 Manihot esculenta HOM05D005922 ORTHO05D006934 5.7e-36 156.0 90 76.7
BcaB02g11286 Brassica carinata HOM05D005922 ORTHO05D006934 1.8e-29 134.4 111 61.3
Zm00001eb399130 Zea mays HOM05D005922 ORTHO05D006934 2.0e-25 120.9 86 61.6
PRCOL_00005504 Prasinoderma coloniale HOM05D005922 ORTHO05D006934 4.2e-23 113.2 208 35.1
Oeu031680.1 Olea europaea HOM05D005922 ORTHO05D006934 1.6e-22 111.3 131 48.1
arahy.Tifrunner.gnm1.ann1.62WV2A Arachis hypogaea HOM05D005922 ORTHO05D006934 1.5e-20 104.8 102 50.0
arahy.Tifrunner.gnm1.ann1.QG6U7W Arachis hypogaea HOM05D005922 ORTHO05D006934 1.5e-20 104.8 102 50.0
arahy.Tifrunner.gnm1.ann1.B3UXS8 Arachis hypogaea HOM05D005922 ORTHO05D006934 4.4e-20 103.2 63 73.0
A02p14700 Brassica napus HOM05D005922 ORTHO05D006934 3.4e-17 93.6 150 37.3
BraA02t06537Z Brassica rapa HOM05D005922 ORTHO05D006934 3.4e-17 93.6 150 37.3
arahy.Tifrunner.gnm1.ann1.XTWJ7M Arachis hypogaea HOM05D002181 ORTHO05D006934 4.5e-17 93.2 112 43.8
arahy.Tifrunner.gnm1.ann1.39MP9Z Arachis hypogaea HOM05D002181 ORTHO05D003287 2.9e-16 90.5 60 65.0
arahy.Tifrunner.gnm1.ann1.10JCRR Arachis hypogaea HOM05D000690 ORTHO05D006934 8.5e-16 89.0 50 74.0
Haze_10820 Corylus avellana HOM05D005922 ORTHO05D006934 1.1e-15 88.6 86 54.7
arahy.Tifrunner.gnm1.ann1.QNE0FJ Arachis hypogaea HOM05D002181 ORTHO05D003287 1.6e-14 84.7 104 42.3
arahy.Tifrunner.gnm1.ann1.043Q1E Arachis hypogaea HOM05D005922 ORTHO05D006934 3.6e-14 83.6 49 73.5
BolC2t08514H Brassica oleracea HOM05D005922 ORTHO05D006934 1.1e-10 72.0 124 37.9
SEGI_24854 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 5.3e-10 69.7 215 27.4
Manes.17G089020 Manihot esculenta HOM05D005922 ORTHO05D006934 7.0e-10 69.3 79 48.1
MCO06G046 Micromonas commoda HOM05D005922 ORTHO05D006934 5.0e-08 63.2 102 35.3
CDE11G0599 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 8.0e-06 55.8 91 34.1


User provided reference genes

Program Settings