Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 4.1e-75 284.6 146 100.0
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 1.4e-38 163.3 148 63.5
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 6.9e-38 161.0 137 64.2
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 1.5e-37 159.8 143 64.3
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 4.5e-37 158.3 147 63.3
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 4.5e-37 158.3 144 66.0
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 2.9e-36 155.6 153 58.2
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 5.0e-36 154.8 152 60.5
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 1.1e-35 153.7 141 62.4
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 1.4e-35 153.3 147 59.9
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 2.1e-34 149.4 145 60.7
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 3.6e-34 148.7 147 61.9
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 1.4e-33 146.7 144 61.1
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 1.4e-33 146.7 144 61.8
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 1.4e-33 146.7 143 57.3
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 2.3e-33 146.0 145 57.9
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 2.3e-33 146.0 143 62.2
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 3.0e-33 145.6 145 60.0
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 3.9e-33 145.2 146 57.5
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 6.7e-33 144.4 146 59.6
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 6.7e-33 144.4 153 57.5
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 1.5e-32 143.3 145 57.2
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 1.5e-32 143.3 145 57.2
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 1.5e-32 143.3 109 66.1
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 1.9e-32 142.9 150 56.7
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 1.9e-32 142.9 146 55.5
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 1.9e-32 142.9 139 60.4
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 1.9e-32 142.9 145 60.0
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 1.9e-32 142.9 145 61.4
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 2.5e-32 142.5 145 55.2
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 2.5e-32 142.5 92 77.2
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 2.5e-32 142.5 149 57.0
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 2.5e-32 142.5 157 54.8
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 3.3e-32 142.1 144 59.7
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 4.3e-32 141.7 145 60.0
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 4.3e-32 141.7 145 57.9
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 5.7e-32 141.4 143 55.9
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 5.7e-32 141.4 143 55.9
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 5.7e-32 141.4 129 63.6
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 5.7e-32 141.4 143 58.0
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 9.7e-32 140.6 143 54.5
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 9.7e-32 140.6 144 56.2
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 1.7e-31 139.8 150 56.0
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 1.7e-31 139.8 150 56.0
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 1.7e-31 139.8 147 55.8
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 3.7e-31 138.7 141 57.4
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 3.7e-31 138.7 144 55.6
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 4.8e-31 138.3 142 57.7
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 6.3e-31 137.9 143 55.2
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 8.2e-31 137.5 144 51.4
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 8.2e-31 137.5 144 59.0
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 1.1e-30 137.1 145 55.9
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 1.4e-30 136.7 144 56.9
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 1.4e-30 136.7 144 56.9
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 1.4e-30 136.7 144 56.2
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 1.8e-30 136.3 142 54.9
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 3.1e-30 135.6 144 53.5
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 4.1e-30 135.2 174 50.0
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 4.1e-30 135.2 137 59.9
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 9.1e-30 134.0 147 52.4
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 4.5e-29 131.7 152 55.9
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 4.5e-29 131.7 145 55.9
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 7.7e-29 131.0 101 68.3
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 1.0e-28 130.6 144 52.8
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 2.2e-28 129.4 84 75.0
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 2.2e-28 129.4 84 75.0
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 2.2e-28 129.4 93 71.0
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 2.2e-28 129.4 139 56.8
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 6.5e-28 127.9 139 56.8
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 8.5e-28 127.5 133 57.9
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 4.2e-27 125.2 89 73.0
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 4.2e-27 125.2 142 56.3
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 3.6e-26 122.1 142 52.1
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 3.6e-26 122.1 139 51.8
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 3.6e-26 122.1 139 51.8
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 3.6e-26 122.1 124 54.8
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.4e-25 120.2 142 52.1
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 1.8e-25 119.8 89 68.5
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.3e-25 119.4 139 50.4
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 3.9e-25 118.6 143 54.5
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 5.1e-25 118.2 142 51.4
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 5.1e-25 118.2 142 51.4
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 5.1e-25 118.2 143 52.4
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 6.7e-25 117.9 155 52.3
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 8.8e-25 117.5 147 53.1
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 4.4e-24 115.2 147 50.3
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 5.7e-24 114.8 115 60.9
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 9.7e-24 114.0 139 48.9
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 9.7e-24 114.0 149 51.0
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 1.3e-23 113.6 158 50.0
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 5.9e-21 104.8 64 81.2
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 5.9e-21 104.8 90 63.3
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 1.3e-20 103.6 117 55.6
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 2.9e-20 102.4 138 50.7
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 1.9e-19 99.8 220 38.6
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 4.2e-19 98.6 114 56.1
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 3.6e-18 95.5 55 83.6
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 4.7e-18 95.1 63 74.6
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 1.8e-17 93.2 135 47.4
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 2.3e-17 92.8 65 69.2
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 3.0e-17 92.4 115 52.2
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 3.0e-17 92.4 139 46.0
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 1.1e-16 90.5 118 50.8
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 1.1e-16 90.5 114 50.9
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 3.7e-15 85.5 67 62.7
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 6.3e-15 84.7 76 57.9
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 2.4e-14 82.8 122 45.1
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 1.2e-13 80.5 64 64.1
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 4.5e-13 78.6 125 44.8
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 3.8e-12 75.5 76 53.9
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 1.1e-11 73.9 67 55.2
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 1.9e-11 73.2 45 75.6
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 2.5e-11 72.8 114 44.7
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 4.0e-09 65.5 85 47.1
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 2.2e-07 59.7 108 41.7


User provided reference genes

Program Settings