Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01011540001 Vitis vinifera HOM05D007068 ORTHO05D008590 1.9e-242 842.0 415 100.0
Dinv17551 Davidia involucrata HOM05D007068 ORTHO05D008590 3.2e-72 276.6 408 44.4
CiPaw.16G093400 Carya illinoinensis HOM05D007068 ORTHO05D008590 1.1e-69 268.1 432 42.6
Cfa019656 Carpinus fangiana HOM05D007068 ORTHO05D008590 3.3e-69 266.5 443 42.4
Atru.chr9.1734 Acer truncatum HOM05D007068 ORTHO05D008590 2.8e-68 263.5 428 39.7
Thecc.03G056900 Theobroma cacao HOM05D007068 ORTHO05D008590 2.8e-68 263.5 427 44.0
TAR622G0435 Trochodendron aralioides HOM05D007068 ORTHO05D008590 3.4e-66 256.5 465 40.6
COL.COLO4_04377 Corchorus olitorius HOM05D007068 ORTHO05D008590 6.5e-65 252.3 421 42.3
Prupe.5G233500 Prunus persica HOM05D007068 ORTHO05D008590 1.9e-64 250.8 447 40.7
Actinidia39838 Actinidia chinensis HOM05D007068 ORTHO05D008590 1.2e-63 248.1 432 41.0
QL10p029594 Quercus lobata HOM05D007068 ORTHO05D008590 1.8e-62 244.2 399 39.6
Haze_18849 Corylus avellana HOM05D007068 ORTHO05D008590 5.1e-62 242.7 479 38.8
Ca_17189_v3 Cicer arietinum L. HOM05D007068 ORTHO05D008590 3.3e-61 240.0 408 39.7
Duzib084G0836 Durio zibethinus HOM05D007068 ORTHO05D008590 1.3e-60 238.0 427 41.2
CSS0009831 Camellia sinensis var. sinensis HOM05D007068 ORTHO05D008590 8.2e-60 235.3 420 40.5
Hma1.2p1_0669F.1_g200120 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 1.5e-58 231.1 464 37.3
Lalb_Chr16g0386991 Lupinus albus HOM05D007068 ORTHO05D008590 1.3e-57 228.0 427 38.6
CAN.G843.56 Capsicum annuum HOM05D007068 ORTHO05D008590 1.7e-57 227.6 424 39.2
Psat7g003560 Pisum sativum HOM05D007068 ORTHO05D008590 2.9e-57 226.9 412 38.1
Eucgr.K02273 Eucalyptus grandis HOM05D007068 ORTHO05D008590 5.0e-57 226.1 447 38.3
PGSC0003DMG400005672 Solanum tuberosum HOM05D007068 ORTHO05D008590 8.5e-57 225.3 427 39.3
CsaV3_1G004370 Cucumis sativus L. HOM05D007068 ORTHO05D008590 1.1e-56 224.9 461 36.9
SalBow1G5613 Salvia bowleyana HOM05D007068 ORTHO05D008590 1.9e-56 224.2 400 38.5
FvH4_5g17330 Fragaria vesca HOM05D007068 ORTHO05D008590 3.2e-56 223.4 407 42.5
FAN18G2889 Fragaria x ananassa HOM05D007068 ORTHO05D008590 3.2e-56 223.4 407 42.5
Rhsim08G0124500 Rhododendron simsii HOM05D007068 ORTHO05D008590 3.2e-56 223.4 410 38.0
Medtr8g107330 Medicago truncatula HOM05D007068 ORTHO05D008590 7.2e-56 222.2 405 37.3
CANSAT80G0386 Cannabis sativa HOM05D007068 ORTHO05D008590 1.2e-55 221.5 398 37.9
MELO3C017359.2 Cucumis melo HOM05D007068 ORTHO05D008590 1.6e-55 221.1 458 36.9
Solyc03g118700.3 Solanum lycopersicum HOM05D007068 ORTHO05D008590 4.7e-55 219.5 429 36.4
Potri.012G047000 Populus trichocarpa HOM05D007068 ORTHO05D008590 7.9e-55 218.8 448 37.9
Oeu031766.1 Olea europaea HOM05D007068 ORTHO05D008590 3.0e-54 216.9 430 36.0
Migut.D01541 Erythranthe guttata HOM05D007068 ORTHO05D008590 3.9e-54 216.5 456 35.7
Gohir.A07G061700 Gossypium hirsutum HOM05D007068 ORTHO05D008590 6.7e-54 215.7 423 38.8
Sed0003101 Sechium edule HOM05D007068 ORTHO05D008590 8.8e-54 215.3 463 35.4
SGA_v2.0_scaffold36G14383 Striga asiatica HOM05D007068 ORTHO05D008590 3.3e-53 213.4 419 36.5
Gohir.D07G066400 Gossypium hirsutum HOM05D007068 ORTHO05D008590 5.7e-53 212.6 425 38.6
FAN13G0457 Fragaria x ananassa HOM05D007068 ORTHO05D008590 2.2e-52 210.7 408 40.2
Nitab4.5_0004556g0050 Nicotiana tabacum HOM05D007068 ORTHO05D008590 3.7e-52 209.9 436 38.1
Nitab4.5_0003401g0040 Nicotiana tabacum HOM05D007068 ORTHO05D008590 1.8e-51 207.6 437 37.1
Nn3g18277 Nelumbo nucifera HOM05D007068 ORTHO05D008590 2.4e-51 207.2 383 37.9
RcHm_v2.0_Chr7g0178441 Rosa chinensis HOM05D007068 ORTHO05D008590 2.4e-51 207.2 412 40.5
Sabra12G0033000 Salix brachista HOM05D007068 ORTHO05D008590 2.4e-51 207.2 480 35.0
Gorai.001G070000 Gossypium raimondii HOM05D007068 ORTHO05D008590 3.1e-51 206.8 427 38.2
Lj4g0019727 Lotus japonicus HOM05D007068 ORTHO05D008590 5.3e-51 206.1 406 36.7
Glyma.08G054400 Glycine max HOM05D007068 ORTHO05D008590 2.2e-49 200.7 418 36.1
ClCG06G014310 Citrullus lanatus HOM05D007068 ORTHO05D008590 3.8e-49 199.9 465 34.4
FAN04G2769 Fragaria x ananassa HOM05D007068 ORTHO05D008590 8.5e-49 198.7 408 39.5
arahy.Tifrunner.gnm1.ann1.N01HH5 Arachis hypogaea HOM05D007068 ORTHO05D008590 1.5e-48 198.0 233 48.1
Manes.14G171300 Manihot esculenta HOM05D007068 ORTHO05D008590 2.5e-48 197.2 433 32.6
CARHR038180 Cardamine hirsuta HOM05D007068 ORTHO05D008590 3.2e-48 196.8 437 32.7
Carub.0001s3769 Capsella rubella HOM05D007068 ORTHO05D008590 1.6e-47 194.5 434 33.4
Cc04_g06260 Coffea canephora HOM05D007068 ORTHO05D008590 2.1e-47 194.1 456 34.0
Thhalv10011472m.g Eutrema salsugineum HOM05D007068 ORTHO05D008590 4.7e-47 193.0 452 31.9
arahy.Tifrunner.gnm1.ann1.ZH8P6D Arachis hypogaea HOM05D007068 ORTHO05D008590 8.0e-47 192.2 225 49.3
Cpa.g.sc3.397 Carica papaya HOM05D007068 ORTHO05D008590 8.0e-47 192.2 424 34.9
A06p04350 Brassica napus HOM05D007068 ORTHO05D008590 1.0e-46 191.8 428 33.6
VMungo0251G0101 Vigna mungo HOM05D007068 ORTHO05D008590 1.8e-46 191.0 411 35.5
Aqoxy3G00060 Aquilegia oxysepala HOM05D007068 ORTHO05D008590 3.0e-46 190.3 435 36.6
Sp1g35530 Schrenkiella parvula HOM05D007068 ORTHO05D008590 3.0e-46 190.3 435 32.2
DCAR_014504 Daucus carota HOM05D007068 ORTHO05D008590 4.0e-46 189.9 423 39.5
AL1G55220 Arabidopsis lyrata HOM05D007068 ORTHO05D008590 6.7e-46 189.1 434 33.9
Aa31LG10G5220 Aethionema arabicum HOM05D007068 ORTHO05D008590 1.5e-45 188.0 453 32.2
AT1G48580 Arabidopsis thaliana HOM05D007068 ORTHO05D008590 5.7e-45 186.0 452 33.2
PSO017G3869 Papaver somniferum HOM05D007068 ORTHO05D008590 5.7e-45 186.0 441 34.9
Peaxi162Scf00683g00453 Petunia axillaris HOM05D007068 ORTHO05D008590 5.7e-45 186.0 426 36.6
PSO478G2297 Papaver somniferum HOM05D007068 ORTHO05D008590 1.3e-44 184.9 433 37.2
TPR.G1401 Trifolium pratense HOM05D007068 ORTHO05D008590 1.3e-44 184.9 428 35.0
Phvul.002G330100 Phaseolus vulgaris HOM05D007068 ORTHO05D008590 1.4e-43 181.4 435 33.3
BcaB07g33743 Brassica carinata HOM05D007068 ORTHO05D008590 1.8e-43 181.0 440 32.3
MD06G1227000 Malus domestica HOM05D007068 ORTHO05D008590 3.1e-43 180.3 263 46.0
C06p03180 Brassica napus HOM05D007068 ORTHO05D008590 1.2e-42 178.3 434 32.0
BraA06t23639Z Brassica rapa HOM05D007068 ORTHO05D008590 3.5e-42 176.8 457 30.6
BcaC08g43059 Brassica carinata HOM05D007068 ORTHO05D008590 1.7e-41 174.5 458 31.0
BolC6t35436H Brassica oleracea HOM05D007068 ORTHO05D008590 1.7e-41 174.5 458 31.0
Lsat_1_v5_gn_2_14700 Lactuca sativa HOM05D007068 ORTHO05D008590 2.9e-41 173.7 355 37.5
Hma1.2p1_0669F.1_g200130 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 1.9e-40 171.0 441 34.2
ECA238G2622 Erigeron canadensis HOM05D007068 ORTHO05D008590 2.5e-40 170.6 347 36.6
Peaxi162Scf00683g00454 Petunia axillaris HOM05D007068 ORTHO05D008590 1.8e-38 164.5 412 35.7
MBI13_g47078_MAGBIO Magnolia biondii HOM05D007068 ORTHO05D008590 1.5e-37 161.4 250 44.4
Ah.06g187490 Amaranthus hybridus HOM05D007068 ORTHO05D008590 7.5e-37 159.1 320 36.9
EL10Ac4g08480 Beta vulgaris HOM05D007068 ORTHO05D008590 2.8e-36 157.1 195 47.7
AUR62037972 Chenopodium quinoa HOM05D007068 ORTHO05D008590 2.9e-33 147.1 137 54.0
Hund10357 Selenicereus undatus HOM05D007068 ORTHO05D008590 4.2e-32 143.3 214 43.9
CDE02G3810 Ceratophyllum demersum HOM05D007068 ORTHO05D008590 9.5e-32 142.1 241 40.7
Ciclev10008793m.g Citrus clementina HOM05D007068 ORTHO05D008590 6.8e-30 136.0 355 31.5
VMungo0251G0567 Vigna mungo HOM05D007068 ORTHO05D008590 8.8e-30 135.6 220 35.5
HPP92_002012 Vanilla planifolia HOM05D007068 ORTHO05D008590 3.7e-28 130.2 254 39.0
ATR0618G302 Amborella trichopoda HOM05D007068 ORTHO05D008590 1.8e-27 127.9 339 33.0
Sc10g0009180 Simmondsia chinensis HOM05D007068 ORTHO05D008590 7.8e-26 122.5 317 34.7
Sopen03g037660 Solanum pennellii HOM05D007068 ORTHO05D008590 1.0e-25 122.1 182 44.0
SEGI_36605 Sequoiadendron giganteum HOM05D007068 ORTHO05D008590 2.9e-25 120.6 146 45.9
SMO164G0186 Selaginella moellendorffii HOM05D007068 ORTHO05D008590 4.3e-24 116.7 168 41.1
Mapoly0060s0110 Marchantia polymorpha HOM05D007068 ORTHO05D008590 1.6e-23 114.8 169 42.0
HanXRQChr14g0431751 Helianthus annuus HOM05D007068 ORTHO05D008590 1.4e-22 111.7 78 70.5
unitig_8.g4506 Utricularia gibba HOM05D007068 ORTHO05D008590 3.4e-21 107.1 422 26.8
SMO164G0105 Selaginella moellendorffii HOM05D020476 ORTHO05D008590 5.7e-21 106.3 166 39.2
Zm00001eb304630 Zea mays HOM05D007068 ORTHO05D008590 3.7e-20 103.6 212 36.3
FAN08G2700 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.7e-17 94.7 124 45.2
vmacro17572 Vaccinium macrocarpon HOM05D007068 ORTHO05D008590 5.0e-17 93.2 83 59.0
AagrBONN_evm.TU.Sc2ySwM_362.2609 Anthoceros agrestis HOM05D007068 ORTHO05D008590 1.6e-15 88.2 135 40.7
Pp3c3_22100 Physcomitrium patens HOM05D007068 ORTHO05D008590 5.2e-14 83.2 101 45.5
Pp3c3_22103 Physcomitrium patens HOM05D007068 ORTHO05D008590 5.2e-14 83.2 101 45.5
arahy.Tifrunner.gnm1.ann1.USF1F6 Arachis hypogaea HOM05D007068 ORTHO05D008590 5.8e-13 79.7 56 60.7
VMungo1215G1321 Vigna mungo HOM05D007068 ORTHO05D008590 4.1e-11 73.6 59 52.5
CBR_g21755 Chara braunii HOM05D007068 ORTHO05D008590 3.9e-09 67.0 73 47.9
VMungo0251G2390 Vigna mungo HOM05D007068 ORTHO05D008590 5.0e-09 66.6 104 35.6


User provided reference genes

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