Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01011491001 Vitis vinifera HOM05D003021 ORTHO05D002235 2.1e-136 489.2 276 100.0
TAR629G0828 Trochodendron aralioides HOM05D003021 ORTHO05D002235 6.5e-45 185.3 278 44.6
Dinv11486 Davidia involucrata HOM05D003021 ORTHO05D002235 8.5e-45 184.9 308 43.5
TAR371G0449 Trochodendron aralioides HOM05D003021 ORTHO05D002235 2.5e-44 183.3 232 49.1
TAR622G0013 Trochodendron aralioides HOM05D003021 ORTHO05D002235 8.8e-42 174.9 281 43.1
Cfa007625 Carpinus fangiana HOM05D003021 ORTHO05D002235 3.1e-39 166.4 366 34.4
Actinidia01976 Actinidia chinensis HOM05D003021 ORTHO05D002235 2.6e-38 163.3 268 42.2
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 2.6e-38 163.3 254 46.1
QL02p039488 Quercus lobata HOM05D003021 ORTHO05D002235 2.9e-37 159.8 285 37.5
Ciclev10011360m.g Citrus clementina HOM05D003021 ORTHO05D002235 7.4e-33 145.2 248 47.2
CiPaw.03G091400 Carya illinoinensis HOM05D003021 ORTHO05D002235 1.7e-32 144.1 303 44.6
Hma1.2p1_1813F.1_g303770 Hydrangea macrophylla HOM05D003021 ORTHO05D002235 1.2e-30 137.9 317 37.2
Hma1.2p1_3044F.1_g332070 Hydrangea macrophylla HOM05D003021 ORTHO05D002235 1.5e-30 137.5 317 36.9
CSS0009655 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 1.4e-28 131.0 287 35.5
Oeu000855.1 Olea europaea HOM05D003021 ORTHO05D002235 9.4e-28 128.3 295 35.6
FAN09G3860 Fragaria x ananassa HOM05D003021 ORTHO05D002235 2.1e-27 127.1 369 31.4
CSS0036404 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 2.7e-27 126.7 344 32.6
Prupe.3G258800 Prunus persica HOM05D003021 ORTHO05D002235 3.6e-27 126.3 235 36.6
MD09G1061400 Malus domestica HOM05D003021 ORTHO05D002235 6.1e-27 125.6 366 35.8
Rhsim09G0002000 Rhododendron simsii HOM05D001654 ORTHO05D002235 6.1e-27 125.6 261 37.9
FvH4_6g47500 Fragaria vesca HOM05D003021 ORTHO05D002235 1.4e-26 124.4 345 33.3
Cpa.g.sc14.145 Carica papaya HOM05D003021 ORTHO05D002235 3.0e-26 123.2 343 31.2
CiPaw.04G058300 Carya illinoinensis HOM05D003021 ORTHO05D002235 3.9e-26 122.9 359 31.5
Nn3g17378 Nelumbo nucifera HOM05D003021 ORTHO05D002235 4.4e-25 119.4 140 45.0
Thecc.04G090900 Theobroma cacao HOM05D003021 ORTHO05D002235 1.3e-24 117.9 347 31.1
Nn4g23344 Nelumbo nucifera HOM05D003021 ORTHO05D002235 1.4e-23 114.4 322 40.1
MBI16_g15533_MAGBIO Magnolia biondii HOM05D003021 ORTHO05D002235 4.1e-23 112.8 143 44.8
FAN05G2768 Fragaria x ananassa HOM05D003021 ORTHO05D002235 7.0e-23 112.1 360 30.6
TWI60G1604 Tripterygium wilfordii HOM05D003021 ORTHO05D002235 2.6e-22 110.2 112 50.0
Duzib187G0754 Durio zibethinus HOM05D003021 ORTHO05D002235 1.7e-21 107.5 361 29.9
DCAR_011056 Daucus carota HOM05D003021 ORTHO05D002235 3.8e-21 106.3 309 33.7
FAN14G5480 Fragaria x ananassa HOM05D003021 ORTHO05D002235 1.5e-20 104.4 114 52.6
Potri.017G090200 Populus trichocarpa HOM05D003021 ORTHO05D002235 3.2e-20 103.2 128 46.1
COL.COLO4_21376 Corchorus olitorius HOM05D003021 ORTHO05D002235 9.4e-20 101.7 132 42.4
RcHm_v2.0_Chr2g0166531 Rosa chinensis HOM05D003021 ORTHO05D002235 4.7e-19 99.4 323 30.3
Sabra17G0079400 Salix brachista HOM05D003021 ORTHO05D002235 8.0e-19 98.6 135 40.7
Rhsim12G0153000 Rhododendron simsii HOM05D003021 ORTHO05D002235 4.0e-18 96.3 282 31.9
Aqoxy3G03562 Aquilegia oxysepala HOM05D003021 ORTHO05D002235 5.2e-18 95.9 102 46.1
Gohir.A05G370400 Gossypium hirsutum HOM05D003021 ORTHO05D002235 2.0e-17 94.0 128 43.0
Sed0010326 Sechium edule HOM05D003021 ORTHO05D002235 2.6e-17 93.6 98 51.0
ClCG11G004640 Citrullus lanatus HOM05D003021 ORTHO05D002235 4.4e-17 92.8 97 51.5
Hma1.2p1_0221F.1_g093100 Hydrangea macrophylla HOM05D003021 ORTHO05D002235 4.4e-17 92.8 167 38.9
Gohir.D04G045100 Gossypium hirsutum HOM05D003021 ORTHO05D002235 5.7e-17 92.4 128 42.2
Gorai.012G050300 Gossypium raimondii HOM05D003021 ORTHO05D002235 5.7e-17 92.4 128 42.2
Manes.01G099000 Manihot esculenta HOM05D003021 ORTHO05D002235 7.5e-17 92.0 147 40.8
MELO3C022022.2 Cucumis melo HOM05D003021 ORTHO05D002235 9.7e-17 91.7 99 51.5
Oeu062145.1 Olea europaea HOM05D003021 ORTHO05D002235 2.8e-16 90.1 314 28.0
Dinv10680 Davidia involucrata HOM05D003021 ORTHO05D002235 4.8e-16 89.4 292 36.0
Glyma.19G027500 Glycine max HOM05D003021 ORTHO05D002235 7.0e-15 85.5 71 57.7
CANSAT64G0795 Cannabis sativa HOM05D003021 ORTHO05D002235 9.1e-15 85.1 267 40.1
Duzib147G0806 Durio zibethinus HOM05D003021 ORTHO05D002235 1.2e-14 84.7 106 44.3
Glyma.13G058900 Glycine max HOM05D003021 ORTHO05D002235 1.2e-14 84.7 71 57.7
Lalb_Chr10g0093201 Lupinus albus HOM05D003021 ORTHO05D002235 1.2e-14 84.7 308 28.9
CSS0009627 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 2.0e-14 84.0 173 37.0
Sed0005734 Sechium edule HOM05D003021 ORTHO05D002235 2.7e-14 83.6 97 47.4
Dinv38768 Davidia involucrata HOM05D003021 ORTHO05D002235 3.5e-14 83.2 286 29.7
CsaV3_5G038410 Cucumis sativus L. HOM05D003021 ORTHO05D002235 4.5e-14 82.8 99 48.5
Glyma.08G241800 Glycine max HOM05D003021 ORTHO05D002235 5.9e-14 82.4 129 36.4
Solyc02g088580.1 Solanum lycopersicum HOM05D003021 ORTHO05D002235 5.9e-14 82.4 92 48.9
Sopen02g033310 Solanum pennellii HOM05D003021 ORTHO05D002235 5.9e-14 82.4 92 48.9
PGSC0003DMG400001352 Solanum tuberosum HOM05D003021 ORTHO05D002235 5.9e-14 82.4 92 48.9
CAN.G206.199 Capsicum annuum HOM05D003021 ORTHO05D002235 7.7e-14 82.0 87 51.7
Actinidia04851 Actinidia chinensis HOM05D002141 ORTHO05D002119 1.3e-13 81.3 233 33.0
CSS0042635 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 1.7e-13 80.9 285 36.8
Haze_14471 Corylus avellana HOM05D003021 ORTHO05D002235 1.7e-13 80.9 249 30.5
Phvul.004G033600 Phaseolus vulgaris HOM05D003021 ORTHO05D002235 2.9e-13 80.1 71 52.1
CAN.G289.54 Capsicum annuum HOM05D003021 ORTHO05D002235 3.8e-13 79.7 95 50.5
PGR083G2506 Punica granatum HOM05D003021 ORTHO05D002235 3.8e-13 79.7 132 39.4
Actinidia09241 Actinidia chinensis HOM05D003021 ORTHO05D002235 5.0e-13 79.3 255 31.0
THA.LOC104823896 Tarenaya hassleriana HOM05D003021 ORTHO05D002235 5.0e-13 79.3 277 29.2
CAN.G1627.5 Capsicum annuum HOM05D009846 ORTHO05D000368 8.5e-13 78.6 87 50.6
Cc07_g03910 Coffea canephora HOM05D003021 ORTHO05D002235 8.5e-13 78.6 129 43.4
ATR0111G037 Amborella trichopoda HOM05D003021 ORTHO05D002235 1.1e-12 78.2 127 41.7
CAN.G1164.3 Capsicum annuum HOM05D009846 ORTHO05D002235 1.1e-12 78.2 87 49.4
Medtr6g013485 Medicago truncatula HOM05D003021 ORTHO05D002235 1.1e-12 78.2 126 39.7
CSS0039196 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 1.5e-12 77.8 231 31.6
Lj1g0014126 Lotus japonicus HOM05D003021 ORTHO05D002235 1.9e-12 77.4 67 58.2
CAN.G411.100 Capsicum annuum HOM05D009846 ORTHO05D000368 3.2e-12 76.6 95 48.4
Sc10g0003280 Simmondsia chinensis HOM05D003021 ORTHO05D002235 3.2e-12 76.6 258 27.9
PSO017G1133 Papaver somniferum HOM05D003021 ORTHO05D002235 4.2e-12 76.3 288 28.8
Duzib205G0780 Durio zibethinus HOM05D017748 ORTHO05D020503 5.5e-12 75.9 135 36.3
QL10p018571 Quercus lobata HOM05D003021 ORTHO05D002235 5.5e-12 75.9 288 30.2
SalBow1G6367 Salvia bowleyana HOM05D003021 ORTHO05D002235 7.2e-12 75.5 386 26.7
PSO013G0053 Papaver somniferum HOM05D003021 ORTHO05D002235 9.4e-12 75.1 142 38.7
TPR.G26173 Trifolium pratense HOM05D003021 ORTHO05D002235 9.4e-12 75.1 72 50.0
Nitab4.5_0008213g0010 Nicotiana tabacum HOM05D003021 ORTHO05D002235 1.2e-11 74.7 87 48.3
arahy.Tifrunner.gnm1.ann1.JN5ZJX Arachis hypogaea HOM05D003021 ORTHO05D002235 1.6e-11 74.3 194 33.0
AL6G26280 Arabidopsis lyrata HOM05D009950 ORTHO05D002235 2.7e-11 73.6 73 50.7
MSTRG.23902 Avicennia marina HOM05D003021 ORTHO05D002235 2.7e-11 73.6 94 42.6
MSTRG.15459 Avicennia marina HOM05D003021 ORTHO05D002235 3.6e-11 73.2 239 29.3
CAN.G638.54 Capsicum annuum HOM05D009846 ORTHO05D000368 3.6e-11 73.2 54 61.1
PSO063G0327 Papaver somniferum HOM05D003021 ORTHO05D002235 3.6e-11 73.2 142 38.0
Sp6g28670 Schrenkiella parvula HOM05D009950 ORTHO05D002235 4.7e-11 72.8 76 50.0
Cfa019291 Carpinus fangiana HOM05D003021 ORTHO05D002235 6.1e-11 72.4 295 26.8
Rhsim06G0013300 Rhododendron simsii HOM05D003021 ORTHO05D002235 8.0e-11 72.0 104 38.5
Thhalv10013405m.g Eutrema salsugineum HOM05D009950 ORTHO05D002235 1.0e-10 71.6 74 52.7
CAN.G411.98 Capsicum annuum HOM05D009846 ORTHO05D002235 1.4e-10 71.2 52 61.5
Potri.012G067100 Populus trichocarpa HOM05D003021 ORTHO05D002235 1.4e-10 71.2 260 27.3
Sed0023229 Sechium edule HOM05D003021 ORTHO05D002235 1.4e-10 71.2 130 36.9
Aa31LG9G16610 Aethionema arabicum HOM05D003021 ORTHO05D002235 1.8e-10 70.9 300 27.3
Ca_04869_v3 Cicer arietinum L. HOM05D003021 ORTHO05D002235 2.3e-10 70.5 71 49.3
Nitab4.5_0003145g0060 Nicotiana tabacum HOM05D003021 ORTHO05D002235 3.0e-10 70.1 105 41.0
THA.LOC104805496 Tarenaya hassleriana HOM05D003021 ORTHO05D002235 3.0e-10 70.1 295 26.8
THA.LOC104822343 Tarenaya hassleriana HOM05D009950 ORTHO05D002235 4.0e-10 69.7 141 36.9
Rhsim08G0073600 Rhododendron simsii HOM05D003021 ORTHO05D002235 5.2e-10 69.3 231 40.7
Glyma.18G264100 Glycine max HOM05D003021 ORTHO05D002235 8.8e-10 68.6 143 31.5
Medtr7g012290 Medicago truncatula HOM05D003021 ORTHO05D002235 8.8e-10 68.6 158 34.8
VMungo0464G0637 Vigna mungo HOM05D003021 ORTHO05D002235 8.8e-10 68.6 71 50.7
Migut.H00652 Erythranthe guttata HOM05D003021 ORTHO05D002235 2.0e-09 67.4 98 38.8
Potri.015G049600 Populus trichocarpa HOM05D003021 ORTHO05D002235 2.0e-09 67.4 119 39.5
CAN.G411.103 Capsicum annuum HOM05D009846 ORTHO05D000368 2.6e-09 67.0 52 59.6
CARHR197890 Cardamine hirsuta HOM05D009950 ORTHO05D002235 4.4e-09 66.2 64 50.0
PSO478G1157 Papaver somniferum HOM05D003021 ORTHO05D002235 4.4e-09 66.2 288 28.8
Atru.chr9.291 Acer truncatum HOM05D003021 ORTHO05D002235 7.5e-09 65.5 139 32.4
AT5G15430 Arabidopsis thaliana HOM05D009950 ORTHO05D002235 7.5e-09 65.5 264 29.9
Psat6g146680 Pisum sativum HOM05D003021 ORTHO05D002235 7.5e-09 65.5 71 47.9
A03p07130 Brassica napus HOM05D009950 ORTHO05D002235 9.8e-09 65.1 274 29.6
BraA03t10035Z Brassica rapa HOM05D009950 ORTHO05D002235 9.8e-09 65.1 274 29.6
ECA232G0555 Erigeron canadensis HOM05D003021 ORTHO05D002235 9.8e-09 65.1 117 38.5
Gohir.A09G011600 Gossypium hirsutum HOM05D003021 ORTHO05D002235 9.8e-09 65.1 204 29.4
Nitab4.5_0000212g0140 Nicotiana tabacum HOM05D003021 ORTHO05D002235 9.8e-09 65.1 130 36.2
Carub.0006s1359 Capsella rubella HOM05D009950 ORTHO05D002235 1.3e-08 64.7 76 47.4
Haze_07672 Corylus avellana HOM05D003021 ORTHO05D002235 1.3e-08 64.7 305 27.5
BolC3t13309H Brassica oleracea HOM05D009950 ORTHO05D002235 1.7e-08 64.3 155 34.8
Thhalv10027728m.g Eutrema salsugineum HOM05D003021 ORTHO05D002235 2.2e-08 63.9 267 27.0
Lsat_1_v5_gn_4_170321 Lactuca sativa HOM05D003021 ORTHO05D002235 2.2e-08 63.9 128 39.1
Migut.K01293 Erythranthe guttata HOM05D003021 ORTHO05D002235 2.8e-08 63.5 155 33.5
Lj2g0010760 Lotus japonicus HOM05D003021 ORTHO05D002235 2.8e-08 63.5 47 61.7
Gohir.D09G010600 Gossypium hirsutum HOM05D003021 ORTHO05D002235 4.8e-08 62.8 205 26.8
CAN.G1236.12 Capsicum annuum HOM05D009846 ORTHO05D002235 8.3e-08 62.0 47 61.7
CAN.G1627.1 Capsicum annuum HOM05D009846 ORTHO05D002235 8.3e-08 62.0 81 45.7
Manes.06G088100 Manihot esculenta HOM05D003021 ORTHO05D002235 8.3e-08 62.0 133 33.1
Sp7g02590 Schrenkiella parvula HOM05D003021 ORTHO05D002235 8.3e-08 62.0 286 28.3
COL.COLO4_36879 Corchorus olitorius HOM05D017748 ORTHO05D020503 1.1e-07 61.6 161 31.1
Lalb_Chr06g0175101 Lupinus albus HOM05D003021 ORTHO05D002235 1.1e-07 61.6 71 42.3
BcaB01g05057 Brassica carinata HOM05D009950 ORTHO05D002235 1.4e-07 61.2 155 34.2
Dinv38770 Davidia involucrata HOM05D003021 ORTHO05D002235 1.4e-07 61.2 95 38.9
AT5G39380 Arabidopsis thaliana HOM05D003021 ORTHO05D002235 1.8e-07 60.8 311 28.6
Carub.0007s3655 Capsella rubella HOM05D003021 ORTHO05D002235 1.8e-07 60.8 76 46.1
Nitab4.5_0000565g0110 Nicotiana tabacum HOM05D003021 ORTHO05D002235 1.8e-07 60.8 88 43.2
Thecc.03G096100 Theobroma cacao HOM05D017748 ORTHO05D020503 1.8e-07 60.8 122 32.8
AL7G50940 Arabidopsis lyrata HOM05D003021 ORTHO05D002235 2.4e-07 60.5 262 26.0
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 2.4e-07 60.5 126 32.5
Eucgr.B00563 Eucalyptus grandis HOM05D003021 ORTHO05D002235 2.4e-07 60.5 110 36.4
SGA_v2.0_scaffold52G19187 Striga asiatica HOM05D003021 ORTHO05D002235 2.4e-07 60.5 144 36.1
CDE04G0389 Ceratophyllum demersum HOM05D001674 ORTHO05D008374 3.1e-07 60.1 142 31.0
HanXRQChr15g0488721 Helianthus annuus HOM05D003021 ORTHO05D002235 3.1e-07 60.1 115 41.7
BcaB01g05059 Brassica carinata HOM05D009950 ORTHO05D002235 4.1e-07 59.7 80 41.2
BcaB06g27294 Brassica carinata HOM05D003021 ORTHO05D002235 4.1e-07 59.7 75 46.7
C03p08120 Brassica napus HOM05D009950 ORTHO05D002235 4.1e-07 59.7 155 34.2
C04p45710 Brassica napus HOM05D003021 ORTHO05D002235 4.1e-07 59.7 75 46.7
BolC4t26155H Brassica oleracea HOM05D003021 ORTHO05D002235 4.1e-07 59.7 75 46.7
CANSAT80G0381 Cannabis sativa HOM05D003021 ORTHO05D002235 4.1e-07 59.7 142 33.1
Os12g0578300 Oryza sativa ssp. japonica HOM05D049656 ORTHO05D002235 4.1e-07 59.7 69 44.9
Psat3g200560 Pisum sativum HOM05D003021 ORTHO05D002235 5.4e-07 59.3 119 35.3
Ah.10g031940 Amaranthus hybridus HOM05D003021 ORTHO05D002235 7.0e-07 58.9 110 40.0
Migut.D01745 Erythranthe guttata HOM05D003021 ORTHO05D002235 1.2e-06 58.2 58 51.7
Gorai.006G012200 Gossypium raimondii HOM05D003021 ORTHO05D002235 1.6e-06 57.8 204 26.5
CSS0009260 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 2.0e-06 57.4 88 34.1
AUR62042563 Chenopodium quinoa HOM05D003021 ORTHO05D002235 2.0e-06 57.4 147 32.7
THA.LOC104802964 Tarenaya hassleriana HOM05D009950 ORTHO05D002235 2.0e-06 57.4 74 39.2
Atru.chr8.382 Acer truncatum HOM05D003021 ORTHO05D002235 3.5e-06 56.6 157 31.8
BcaC03g13413 Brassica carinata HOM05D009950 ORTHO05D002235 3.5e-06 56.6 79 44.3
C02p07700 Brassica napus HOM05D009950 ORTHO05D002235 3.5e-06 56.6 79 44.3
BolC2t06701H Brassica oleracea HOM05D009950 ORTHO05D002235 3.5e-06 56.6 79 44.3
Os03g0211400 Oryza sativa ssp. japonica HOM05D003021 ORTHO05D002235 3.5e-06 56.6 52 55.8
Aa31LG2G3990 Aethionema arabicum HOM05D003021 ORTHO05D002235 4.5e-06 56.2 251 25.9
BraA04t16870Z Brassica rapa HOM05D003021 ORTHO05D002235 4.5e-06 56.2 298 27.2
Gohir.D03G095166 Gossypium hirsutum HOM05D017748 ORTHO05D020503 4.5e-06 56.2 126 33.3
BcaC04g24234 Brassica carinata HOM05D009950 ORTHO05D002235 5.9e-06 55.8 77 40.3
BcaNung03311 Brassica carinata HOM05D009950 ORTHO05D002235 5.9e-06 55.8 77 40.3
TPR.G33474 Trifolium pratense HOM05D003021 ORTHO05D002235 5.9e-06 55.8 125 36.0


User provided reference genes

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